Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 9.1e-195 683.3 331 100.0
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 3.0e-166 588.6 300 92.3
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 2.6e-157 558.9 341 78.9
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 4.9e-156 554.7 334 79.0
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 3.2e-155 552.0 329 79.9
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 4.1e-155 551.6 331 77.6
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 2.0e-154 549.3 334 76.9
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 7.8e-154 547.4 295 85.1
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 2.3e-153 545.8 331 78.9
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 2.3e-153 545.8 331 78.2
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 2.3e-153 545.8 300 84.0
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 2.3e-153 545.8 333 77.8
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 3.9e-153 545.0 333 78.4
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 5.0e-153 544.7 334 77.5
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 6.6e-153 544.3 332 76.5
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 1.5e-152 543.1 332 76.5
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.9e-152 542.7 331 77.9
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 1.9e-152 542.7 332 76.5
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 2.5e-152 542.3 326 78.5
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 7.3e-152 540.8 330 77.9
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.2e-151 540.0 331 77.3
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 1.2e-151 540.0 335 78.2
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 1.6e-151 539.7 314 79.6
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 1.6e-151 539.7 303 83.2
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 2.1e-151 539.3 328 78.0
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 3.6e-151 538.5 331 77.6
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.8e-150 536.2 331 77.0
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 3.1e-150 535.4 297 82.8
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 5.2e-150 534.6 331 76.4
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 5.2e-150 534.6 331 76.4
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 5.2e-150 534.6 331 76.4
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 5.2e-150 534.6 331 76.7
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 8.9e-150 533.9 325 77.2
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 1.5e-149 533.1 298 81.9
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 2.6e-149 532.3 331 75.8
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 2.6e-149 532.3 318 78.0
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 3.4e-149 531.9 335 76.4
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 4.4e-149 531.6 331 76.1
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 5.8e-149 531.2 331 75.5
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 2.2e-148 529.3 330 76.1
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 6.4e-148 527.7 308 80.5
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 1.1e-147 526.9 329 75.7
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 1.4e-147 526.6 329 75.7
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 1.9e-147 526.2 296 81.4
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 1.9e-147 526.2 298 81.2
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 3.2e-147 525.4 332 75.0
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 3.2e-147 525.4 329 75.4
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 4.1e-147 525.0 294 82.0
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 7.1e-147 524.2 348 72.7
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.2e-146 523.5 305 79.7
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.2e-146 523.5 295 82.4
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 1.2e-146 523.5 295 81.7
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 2.1e-146 522.7 327 75.5
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 1.3e-145 520.0 294 81.0
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 3.0e-145 518.8 333 75.1
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 3.9e-145 518.5 308 79.5
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 3.9e-145 518.5 330 74.8
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 8.6e-145 517.3 300 79.3
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 8.6e-145 517.3 308 78.6
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 1.9e-144 516.2 310 78.4
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 4.3e-144 515.0 334 73.7
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 1.6e-143 513.1 310 78.7
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 1.6e-143 513.1 319 76.2
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 2.8e-143 512.3 309 77.0
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 4.7e-143 511.5 328 73.5
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 6.2e-143 511.1 327 75.5
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 3.1e-142 508.8 329 73.3
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 4.0e-142 508.4 317 77.3
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 6.8e-142 507.7 319 74.9
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 8.9e-142 507.3 301 77.7
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 1.5e-141 506.5 331 74.9
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 1.3e-140 503.4 317 76.0
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 1.9e-139 499.6 338 73.4
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 1.9e-139 499.6 338 73.4
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 7.1e-139 497.7 370 66.8
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 7.1e-139 497.7 323 73.1
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 8.6e-137 490.7 295 77.3
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 4.3e-136 488.4 305 74.8
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 3.5e-130 468.8 261 85.1
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 5.8e-125 451.4 285 76.1
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 2.9e-124 449.1 288 74.7
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 4.9e-124 448.4 268 76.9
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 1.6e-122 443.4 318 68.9
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 8.7e-121 437.6 292 68.5
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 2.5e-120 436.0 292 73.6
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 4.3e-120 435.3 276 76.4
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 1.3e-119 433.7 241 83.0
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 4.8e-119 431.8 241 81.3
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 2.6e-117 426.0 293 66.6
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 2.6e-117 426.0 270 73.0
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 4.5e-117 425.2 241 81.3
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 5.8e-117 424.9 291 67.0
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 1.3e-116 423.7 252 77.0
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.3e-116 423.7 311 63.7
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 1.6e-111 406.8 259 75.7
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 3.4e-109 399.1 287 65.2
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 1.3e-105 387.1 253 74.7
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 1.6e-98 363.6 208 80.8
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 3.0e-97 359.4 204 80.4
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 9.0e-94 347.8 255 66.3
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.3e-92 344.0 182 84.1
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 1.4e-86 323.9 255 63.9
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 5.7e-72 275.4 170 74.7
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 2.2e-71 273.5 292 49.3
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 1.3e-68 264.2 255 51.8
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 1.8e-62 243.8 195 63.6
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 1.2e-58 231.1 138 79.0
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 4.7e-58 229.2 210 58.6
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 1.0e-57 228.0 169 68.0
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 1.1e-54 218.0 300 41.0
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 6.6e-44 182.2 281 36.7
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.1e-43 181.4 131 71.0
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 8.9e-41 171.8 154 59.7
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 5.8e-40 169.1 284 38.0
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 7.5e-40 168.7 185 55.1
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 4.0e-33 146.4 275 33.5
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 2.1e-29 134.0 277 33.6
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.5e-27 127.9 157 43.9
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 9.9e-24 115.2 97 67.0
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 2.3e-20 104.0 85 64.7
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 4.9e-15 86.3 57 68.4
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 3.3e-11 73.6 51 64.7
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 1.5e-08 64.7 42 69.0
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 2.2e-07 60.8 41 63.4
Peaxi162Scf00786g00028 Petunia axillaris HOM05D014441 ORTHO05D016353 9.3e-06 55.5 31 74.2


User provided reference genes

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