Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0167361 Helianthus annuus HOM05D005928 ORTHO05D007500 1.1e-89 333.2 163 100.0
HanXRQChr17g0560781 Helianthus annuus HOM05D005928 ORTHO05D007500 4.4e-41 171.8 85 95.3
HanXRQChr08g0222551 Helianthus annuus HOM05D005928 ORTHO05D007500 1.7e-40 169.9 103 79.6
ECA233G3100 Erigeron canadensis HOM05D005928 ORTHO05D007500 8.3e-40 167.5 106 76.4
Lsat_1_v5_gn_8_13460 Lactuca sativa HOM05D005928 ORTHO05D007500 4.5e-38 161.8 100 78.0
Cfa001227 Carpinus fangiana HOM05D005928 ORTHO05D007500 1.3e-37 160.2 113 70.8
Haze_17335 Corylus avellana HOM05D005928 ORTHO05D007500 1.3e-37 160.2 113 70.8
Dinv21825 Davidia involucrata HOM05D005928 ORTHO05D007500 2.2e-37 159.5 113 71.7
Hma1.2p1_0292F.1_g115770 Hydrangea macrophylla HOM05D005928 ORTHO05D007500 8.5e-37 157.5 101 76.2
Atru.chr12.150 Acer truncatum HOM05D005928 ORTHO05D007500 1.1e-36 157.1 104 74.0
CiPaw.02G198000 Carya illinoinensis HOM05D005928 ORTHO05D007500 1.1e-36 157.1 114 67.5
MELO3C020118.2 Cucumis melo HOM05D005928 ORTHO05D007500 1.9e-36 156.4 92 77.2
Hma1.2p1_0292F.1_g115780 Hydrangea macrophylla HOM05D005928 ORTHO05D007500 1.9e-36 156.4 87 83.9
CsaV3_5G010790 Cucumis sativus L. HOM05D005928 ORTHO05D007500 2.5e-36 156.0 118 66.1
Sed0018034 Sechium edule HOM05D005928 ORTHO05D007500 4.2e-36 155.2 92 77.2
ClCG07G004890 Citrullus lanatus HOM05D005928 ORTHO05D007500 5.5e-36 154.8 92 76.1
Cc02_g05580 Coffea canephora HOM05D005928 ORTHO05D007500 5.5e-36 154.8 92 75.0
Prupe.2G261400 Prunus persica HOM05D005928 ORTHO05D007500 1.2e-35 153.7 164 53.7
Thecc.10G175200 Theobroma cacao HOM05D005928 ORTHO05D007500 1.2e-35 153.7 110 70.0
arahy.Tifrunner.gnm1.ann1.SGI3UP Arachis hypogaea HOM05D005928 ORTHO05D007500 1.6e-35 153.3 113 67.3
EL10Ac2g04264 Beta vulgaris HOM05D005928 ORTHO05D007500 1.6e-35 153.3 107 72.0
MSTRG.27277 Avicennia marina HOM05D005928 ORTHO05D007500 2.1e-35 152.9 92 77.2
CSS0005641 Camellia sinensis var. sinensis HOM05D005928 ORTHO05D007500 2.1e-35 152.9 91 79.1
CSS0024669 Camellia sinensis var. sinensis HOM05D005928 ORTHO05D007500 2.1e-35 152.9 91 79.1
Cpa.g.sc19.87 Carica papaya HOM05D005928 ORTHO05D007500 2.1e-35 152.9 114 67.5
COL.COLO4_26867 Corchorus olitorius HOM05D005928 ORTHO05D007500 2.7e-35 152.5 110 70.0
MD01G1163400 Malus domestica HOM05D005928 ORTHO05D007500 2.7e-35 152.5 110 69.1
QL08p064521 Quercus lobata HOM05D005928 ORTHO05D007500 2.7e-35 152.5 92 77.2
arahy.Tifrunner.gnm1.ann1.S9XQPV Arachis hypogaea HOM05D005928 ORTHO05D007500 3.6e-35 152.1 104 70.2
RcHm_v2.0_Chr1g0371751 Rosa chinensis HOM05D005928 ORTHO05D007500 3.6e-35 152.1 92 77.2
Lj8C57T12 Lonicera japonica HOM05D005928 ORTHO05D007500 6.1e-35 151.4 103 71.8
Hund13473 Selenicereus undatus HOM05D005928 ORTHO05D007500 8.0e-35 151.0 107 71.0
Gohir.A05G279700 Gossypium hirsutum HOM05D005928 ORTHO05D007500 1.0e-34 150.6 103 72.8
Gorai.009G294700 Gossypium raimondii HOM05D005928 ORTHO05D007500 1.0e-34 150.6 103 72.8
MD07G1231400 Malus domestica HOM05D005928 ORTHO05D007500 1.0e-34 150.6 89 78.7
CiPaw.01G304700 Carya illinoinensis HOM05D005928 ORTHO05D007500 1.4e-34 150.2 92 75.0
FvH4_7g25610 Fragaria vesca HOM05D005928 ORTHO05D007500 1.4e-34 150.2 88 79.5
FAN03G1156 Fragaria x ananassa HOM05D005928 ORTHO05D007500 1.4e-34 150.2 107 68.2
FAN10G3250 Fragaria x ananassa HOM05D005928 ORTHO05D007500 1.4e-34 150.2 88 79.5
Gohir.D05G281300 Gossypium hirsutum HOM05D005928 ORTHO05D007500 1.4e-34 150.2 103 72.8
Ah.16g104190 Amaranthus hybridus HOM05D005928 ORTHO05D007500 1.8e-34 149.8 107 71.0
FAN01G2489 Fragaria x ananassa HOM05D005928 ORTHO05D007500 1.8e-34 149.8 107 68.2
Peaxi162Scf00464g00016 Petunia axillaris HOM05D005928 ORTHO05D007500 1.8e-34 149.8 108 69.4
GSVIVG01032711001 Vitis vinifera HOM05D005928 ORTHO05D007500 1.8e-34 149.8 85 82.4
PGR142G0245 Punica granatum HOM05D005928 ORTHO05D007500 2.3e-34 149.4 89 77.5
Lj6g0027393 Lotus japonicus HOM05D005928 ORTHO05D007500 3.0e-34 149.1 108 67.6
Lalb_Chr23g0277221 Lupinus albus HOM05D005928 ORTHO05D007500 4.0e-34 148.7 92 73.9
TAR633G2075 Trochodendron aralioides HOM05D005928 ORTHO05D007500 4.0e-34 148.7 91 75.8
FAN06G2388 Fragaria x ananassa HOM05D005928 ORTHO05D007500 5.2e-34 148.3 87 79.3
Migut.F00589 Erythranthe guttata HOM05D005928 ORTHO05D007500 6.8e-34 147.9 83 81.9
Manes.07G138100 Manihot esculenta HOM05D005928 ORTHO05D007500 6.8e-34 147.9 159 53.5
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 6.8e-34 147.9 92 71.7
CDE04G0773 Ceratophyllum demersum HOM05D005928 ORTHO05D007500 8.8e-34 147.5 105 67.6
Ciclev10031841m.g Citrus clementina HOM05D005928 ORTHO05D007500 8.8e-34 147.5 104 72.1
SalBow3G0966 Salvia bowleyana HOM05D005928 ORTHO05D007500 8.8e-34 147.5 92 76.1
Nn2g10360 Nelumbo nucifera HOM05D005928 ORTHO05D007500 1.2e-33 147.1 108 66.7
Rhsim09G0183900 Rhododendron simsii HOM05D005928 ORTHO05D007500 1.2e-33 147.1 84 81.0
Sabra19G0058500 Salix brachista HOM05D005928 ORTHO05D007500 2.6e-33 146.0 101 68.3
TWI73G0552 Tripterygium wilfordii HOM05D005928 ORTHO05D007500 3.4e-33 145.6 111 66.7
CDE06G0652 Ceratophyllum demersum HOM05D005928 ORTHO05D007500 4.4e-33 145.2 107 65.4
Eucgr.G03124 Eucalyptus grandis HOM05D005928 ORTHO05D007500 4.4e-33 145.2 89 77.5
Potri.019G049000 Populus trichocarpa HOM05D005928 ORTHO05D007500 4.4e-33 145.2 106 64.2
BcaC05g29416 Brassica carinata HOM05D005928 ORTHO05D007500 5.7e-33 144.8 103 67.0
C05p57100 Brassica napus HOM05D005928 ORTHO05D007500 5.7e-33 144.8 103 67.0
Sp3g09300 Schrenkiella parvula HOM05D005928 ORTHO05D007500 5.7e-33 144.8 92 71.7
Sc11g0005710 Simmondsia chinensis HOM05D005928 ORTHO05D007500 5.7e-33 144.8 103 66.0
THA.LOC104826835 Tarenaya hassleriana HOM05D005928 ORTHO05D007500 5.7e-33 144.8 102 67.6
BolC5t34373H Brassica oleracea HOM05D005928 ORTHO05D007500 7.5e-33 144.4 103 67.0
CAN.G251.1 Capsicum annuum HOM05D005928 ORTHO05D007500 7.5e-33 144.4 92 73.9
Manes.10G005400 Manihot esculenta HOM05D005928 ORTHO05D007500 7.5e-33 144.4 160 52.5
vmacro09978 Vaccinium macrocarpon HOM05D005928 ORTHO05D007500 7.5e-33 144.4 109 68.8
A05p38280 Brassica napus HOM05D005928 ORTHO05D007500 9.8e-33 144.1 97 69.1
CANSAT56G3104 Cannabis sativa HOM05D005928 ORTHO05D007500 9.8e-33 144.1 92 71.7
BraA05t22620Z Brassica rapa HOM05D005928 ORTHO05D007500 1.3e-32 143.7 97 69.1
Thhalv10020975m.g Eutrema salsugineum HOM05D005928 ORTHO05D007500 1.3e-32 143.7 92 70.7
Ca_15186_v3 Cicer arietinum L. HOM05D005928 ORTHO05D007500 1.7e-32 143.3 100 69.0
Solyc06g050310.3 Solanum lycopersicum HOM05D005928 ORTHO05D007500 1.7e-32 143.3 104 67.3
Sopen06g015810 Solanum pennellii HOM05D005928 ORTHO05D007500 1.7e-32 143.3 104 67.3
TPR.G31620 Trifolium pratense HOM05D005928 ORTHO05D007500 1.7e-32 143.3 105 64.8
BcaB06g25666 Brassica carinata HOM05D005928 ORTHO05D007500 2.2e-32 142.9 92 70.7
Glyma.11G235500 Glycine max HOM05D005928 ORTHO05D007500 2.2e-32 142.9 85 75.3
Medtr3g072340 Medicago truncatula HOM05D005928 ORTHO05D007500 2.8e-32 142.5 118 59.3
Nitab4.5_0002713g0050 Nicotiana tabacum HOM05D005928 ORTHO05D007500 2.8e-32 142.5 104 68.3
PSO017G6961 Papaver somniferum HOM05D005928 ORTHO05D007500 2.8e-32 142.5 80 78.8
Aqoxy4G02353 Aquilegia oxysepala HOM05D005928 ORTHO05D007500 3.7e-32 142.1 108 64.8
Lalb_Chr08g0231321 Lupinus albus HOM05D005928 ORTHO05D007500 3.7e-32 142.1 91 71.4
PSO170G4626 Papaver somniferum HOM05D005928 ORTHO05D007500 3.7e-32 142.1 80 80.0
AL3G22510 Arabidopsis lyrata HOM05D005928 ORTHO05D007500 4.8e-32 141.7 92 70.7
AT3G10970 Arabidopsis thaliana HOM05D005928 ORTHO05D007500 4.8e-32 141.7 92 70.7
CARHR085550 Cardamine hirsuta HOM05D005928 ORTHO05D007500 4.8e-32 141.7 92 70.7
Glyma.18G021400 Glycine max HOM05D005928 ORTHO05D007500 4.8e-32 141.7 83 77.1
Phvul.001G248900 Phaseolus vulgaris HOM05D005928 ORTHO05D007500 8.3e-32 141.0 85 72.9
VMungo1383G3668 Vigna mungo HOM05D005928 ORTHO05D007500 8.3e-32 141.0 85 74.1
MBI15_g22073_MAGBIO Magnolia biondii HOM05D005928 ORTHO05D007500 1.1e-31 140.6 85 75.3
Nitab4.5_0000263g0260 Nicotiana tabacum HOM05D005928 ORTHO05D007500 1.1e-31 140.6 104 67.3
Actinidia07803 Actinidia chinensis HOM05D005928 ORTHO05D007500 1.4e-31 140.2 99 68.7
DCAR_019810 Daucus carota HOM05D005928 ORTHO05D007500 1.8e-31 139.8 89 70.8
ATR0681G120 Amborella trichopoda HOM05D005928 ORTHO05D007500 4.1e-31 138.7 103 62.1
Zm00001eb282030 Zea mays HOM05D005928 ORTHO05D007500 9.1e-31 137.5 100 65.0
Aa31LG3G4180 Aethionema arabicum HOM05D005928 ORTHO05D007500 2.7e-30 136.0 101 65.3
THA.LOC104823175 Tarenaya hassleriana HOM05D005928 ORTHO05D007500 3.5e-30 135.6 94 69.1
Carub.0003s1024 Capsella rubella HOM05D005928 ORTHO05D007500 4.5e-30 135.2 88 71.6
Os05g0168300 Oryza sativa ssp. japonica HOM05D005928 ORTHO05D007500 3.8e-29 132.1 100 63.0
Psat5g131560 Pisum sativum HOM05D005928 ORTHO05D007500 1.5e-28 130.2 159 46.5
HPP92_025120 Vanilla planifolia HOM05D005928 ORTHO05D007500 1.5e-28 130.2 97 62.9
SEGI_10893 Sequoiadendron giganteum HOM05D005928 ORTHO05D007500 2.1e-27 126.3 82 69.5
AagrBONN_evm.TU.Sc2ySwM_117.3104 Anthoceros agrestis HOM05D005928 ORTHO05D007500 2.6e-25 119.4 78 69.2
Mapoly0051s0069 Marchantia polymorpha HOM05D005928 ORTHO05D007500 5.7e-25 118.2 88 60.2
SMO117G0217 Selaginella moellendorffii HOM05D005928 ORTHO05D007500 1.1e-23 114.0 84 59.5
Pp3c1_33360 Physcomitrium patens HOM05D005928 ORTHO05D007500 1.8e-23 113.2 80 65.0
Ca_15187_v3 Cicer arietinum L. HOM05D005928 ORTHO05D007500 4.1e-23 112.1 76 69.7
Oeu040824.1 Olea europaea HOM05D005928 ORTHO05D007500 9.2e-23 110.9 64 79.7
FAN26G2109 Fragaria x ananassa HOM05D005928 ORTHO05D007500 1.3e-21 107.1 59 83.1
COL.COLO4_00092 Corchorus olitorius HOM05D005928 ORTHO05D007500 1.8e-18 96.7 73 68.5
Duzib187G1301 Durio zibethinus HOM05D005928 ORTHO05D019098 1.6e-14 83.6 54 70.4
Cre08.g360801 Chlamydomonas reinhardtii HOM05D005928 ORTHO05D007500 9.5e-12 74.3 81 42.0
unitig_0.g1648 Utricularia gibba HOM05D005928 ORTHO05D007500 3.1e-10 69.3 45 68.9
AUR62043569 Chenopodium quinoa HOM05D005928 ORTHO05D007500 4.0e-10 68.9 107 42.1
AUR62044187 Chenopodium quinoa HOM05D005928 ORTHO05D007500 4.0e-10 68.9 107 42.1
Sed0024675 Sechium edule HOM05D005928 ORTHO05D007500 5.2e-10 68.6 54 63.0
PSO170G0859 Papaver somniferum HOM05D005928 ORTHO05D007500 1.2e-09 67.4 47 68.1
AUR62012353 Chenopodium quinoa HOM05D005928 ORTHO05D007500 2.6e-09 66.2 107 41.1


User provided reference genes

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