Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 9.3e-128 460.3 246 100.0
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 7.5e-61 238.0 272 56.6
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.1e-38 164.5 208 47.6
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 4.0e-38 162.5 305 39.7
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 8.4e-36 154.8 188 48.9
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 1.1e-35 154.5 294 39.5
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 1.4e-35 154.1 188 49.5
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 2.4e-35 153.3 202 45.5
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 3.2e-35 152.9 203 46.8
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 7.1e-35 151.8 201 46.3
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 7.1e-35 151.8 192 46.9
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 7.1e-35 151.8 179 49.2
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 9.2e-35 151.4 202 48.0
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 1.2e-34 151.0 208 43.8
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 2.1e-34 150.2 220 42.7
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 3.5e-34 149.4 237 39.7
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 4.6e-34 149.1 147 54.4
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 7.8e-34 148.3 209 44.5
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 1.7e-33 147.1 216 42.1
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.7e-33 147.1 219 42.9
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 2.3e-33 146.7 287 36.6
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 3.0e-33 146.4 208 43.8
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 3.0e-33 146.4 196 46.9
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 3.9e-33 146.0 199 44.7
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 3.9e-33 146.0 210 44.3
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 5.1e-33 145.6 211 43.1
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 5.1e-33 145.6 282 36.2
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 6.6e-33 145.2 192 45.3
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 6.6e-33 145.2 282 36.5
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 8.6e-33 144.8 161 48.4
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 2.5e-32 143.3 213 43.2
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 3.3e-32 142.9 159 54.1
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 5.6e-32 142.1 194 43.3
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 9.6e-32 141.4 249 42.6
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 9.6e-32 141.4 191 44.5
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 1.2e-31 141.0 207 41.5
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 1.2e-31 141.0 238 43.3
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 2.1e-31 140.2 155 51.0
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.1e-31 140.2 221 39.8
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 2.8e-31 139.8 271 38.7
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 2.8e-31 139.8 183 46.4
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 2.8e-31 139.8 263 37.6
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 3.6e-31 139.4 197 43.7
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 4.7e-31 139.0 205 44.9
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 6.2e-31 138.7 148 50.0
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 6.2e-31 138.7 209 43.5
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 6.2e-31 138.7 209 43.5
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 6.2e-31 138.7 206 41.7
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 8.1e-31 138.3 232 40.1
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 8.1e-31 138.3 209 43.5
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 1.4e-30 137.5 148 49.3
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.4e-30 137.5 148 49.3
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 1.8e-30 137.1 212 40.6
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 1.8e-30 137.1 212 40.6
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 1.8e-30 137.1 206 44.7
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 4.0e-30 136.0 201 43.3
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 4.0e-30 136.0 135 56.3
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 4.0e-30 136.0 160 48.1
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 5.2e-30 135.6 151 49.0
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 5.2e-30 135.6 199 45.7
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 5.2e-30 135.6 193 46.6
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 6.9e-30 135.2 135 56.3
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 6.9e-30 135.2 143 50.3
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 8.9e-30 134.8 170 47.1
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 8.9e-30 134.8 209 43.1
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 8.9e-30 134.8 276 35.1
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 1.2e-29 134.4 134 53.7
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 1.2e-29 134.4 135 56.3
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 1.2e-29 134.4 236 38.1
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 3.4e-29 132.9 211 40.8
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 5.8e-29 132.1 203 41.9
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 5.8e-29 132.1 210 40.5
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 5.8e-29 132.1 197 40.6
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 7.6e-29 131.7 300 38.0
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 1.3e-28 131.0 183 41.0
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 1.3e-28 131.0 205 42.4
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.7e-28 130.6 144 48.6
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 2.2e-28 130.2 189 40.7
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 2.9e-28 129.8 189 39.7
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 4.9e-28 129.0 203 38.9
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 4.9e-28 129.0 185 43.2
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 8.4e-28 128.3 197 38.1
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 8.4e-28 128.3 206 42.2
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 1.1e-27 127.9 189 39.7
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 1.1e-27 127.9 203 38.9
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 1.9e-27 127.1 212 41.0
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 2.4e-27 126.7 189 39.7
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 2.4e-27 126.7 189 39.7
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 2.4e-27 126.7 189 39.7
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 3.2e-27 126.3 202 40.6
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 5.4e-27 125.6 189 39.2
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 1.2e-26 124.4 167 41.9
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 3.5e-26 122.9 209 38.3
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 1.0e-25 121.3 201 36.8
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 5.1e-25 119.0 135 47.4
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 8.7e-25 118.2 178 41.0
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 5.6e-24 115.5 133 45.1
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 1.6e-23 114.0 151 41.7
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 3.6e-23 112.8 186 41.9
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 3.6e-23 112.8 144 50.7
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 2.0e-21 107.1 209 37.8
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 5.4e-19 99.0 179 36.9
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 5.4e-19 99.0 131 40.5
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 4.6e-18 95.9 162 41.4
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 6.0e-18 95.5 119 47.9
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 7.9e-18 95.1 99 51.5
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 1.3e-17 94.4 189 33.3
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 1.8e-17 94.0 83 59.0
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 3.9e-17 92.8 146 34.2
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 4.3e-16 89.4 209 29.2
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 4.8e-15 85.9 291 30.9
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 1.1e-14 84.7 203 29.6
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 7.6e-13 78.6 172 31.4
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 1.6e-07 60.8 138 34.8
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 6.2e-07 58.9 193 28.0


User provided reference genes

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