Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 2.9e-48 194.9 98 100.0
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 2.6e-41 171.8 95 91.6
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 9.4e-39 163.3 93 84.9
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 1.6e-38 162.5 97 86.6
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 3.8e-32 141.4 93 73.1
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 6.5e-32 140.6 93 74.2
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 7.2e-31 137.1 92 71.7
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 9.4e-31 136.7 93 72.0
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.2e-30 136.3 93 68.8
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 3.6e-30 134.8 92 70.7
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 3.6e-30 134.8 93 67.7
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 4.7e-30 134.4 95 70.5
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 6.1e-30 134.0 95 69.5
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 6.1e-30 134.0 95 69.5
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 6.1e-30 134.0 92 69.6
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 7.9e-30 133.7 87 74.7
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 7.9e-30 133.7 95 69.5
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 7.9e-30 133.7 90 70.0
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 1.0e-29 133.3 95 66.3
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 2.3e-29 132.1 92 70.7
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 3.9e-29 131.3 92 69.6
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 3.9e-29 131.3 95 67.4
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 3.9e-29 131.3 91 71.4
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 6.7e-29 130.6 95 67.4
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 6.7e-29 130.6 87 73.6
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 8.8e-29 130.2 92 69.6
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 8.8e-29 130.2 86 72.1
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 1.1e-28 129.8 95 67.4
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.5e-28 129.4 91 69.2
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 1.5e-28 129.4 95 67.4
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 1.5e-28 129.4 82 79.3
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 2.0e-28 129.0 93 65.6
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 3.3e-28 128.3 90 70.0
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 3.3e-28 128.3 93 66.7
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 3.3e-28 128.3 95 67.4
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 4.4e-28 127.9 86 70.9
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 4.4e-28 127.9 86 70.9
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 4.4e-28 127.9 86 70.9
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 7.4e-28 127.1 95 66.3
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 7.4e-28 127.1 95 66.3
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 7.4e-28 127.1 86 68.6
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 9.7e-28 126.7 86 69.8
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.3e-27 126.3 95 66.3
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 1.7e-27 125.9 87 67.8
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 2.2e-27 125.6 92 66.3
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 2.2e-27 125.6 92 67.4
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 2.2e-27 125.6 92 67.4
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 2.2e-27 125.6 92 67.4
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.8e-27 125.2 90 67.8
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.8e-27 125.2 98 65.3
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 3.7e-27 124.8 92 65.2
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 4.8e-27 124.4 92 66.3
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 4.8e-27 124.4 95 66.3
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 6.3e-27 124.0 95 62.1
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 1.4e-26 122.9 84 71.4
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 2.4e-26 122.1 96 63.5
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 3.1e-26 121.7 92 60.9
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 3.1e-26 121.7 90 65.6
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 4.1e-26 121.3 96 61.5
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 5.3e-26 120.9 93 64.5
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 5.3e-26 120.9 91 63.7
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 5.3e-26 120.9 86 69.8
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 7.0e-26 120.6 87 65.5
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 1.5e-25 119.4 95 62.1
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 1.5e-25 119.4 92 59.8
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 1.5e-25 119.4 88 65.9
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 1.5e-25 119.4 88 65.9
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 1.5e-25 119.4 93 61.3
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 4.5e-25 117.9 92 64.1
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 7.7e-25 117.1 88 67.0
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 7.7e-25 117.1 90 65.6
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 2.2e-24 115.5 84 65.5
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 3.8e-24 114.8 85 61.2
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 1.9e-23 112.5 95 57.9
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 2.1e-22 109.0 92 60.9
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 3.6e-22 108.2 93 58.1
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 4.7e-22 107.8 73 68.5
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 4.7e-22 107.8 85 57.6
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 8.0e-22 107.1 94 55.3
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 2.3e-21 105.5 94 54.3
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.3e-21 105.5 94 54.3
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.3e-21 105.5 94 54.3
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.0e-21 105.1 93 53.8
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 5.2e-21 104.4 90 56.7
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 5.2e-21 104.4 68 76.5
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 8.8e-21 103.6 83 59.0
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 8.8e-21 103.6 83 60.2
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 1.5e-20 102.8 94 54.3
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 4.4e-20 101.3 70 64.3
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 4.4e-20 101.3 71 63.4
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 7.4e-20 100.5 93 55.9
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 1.3e-19 99.8 86 58.1
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 3.7e-19 98.2 85 57.6
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 4.8e-19 97.8 89 52.8
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 4.8e-19 97.8 89 52.8
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 4.8e-19 97.8 72 68.1
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 1.1e-18 96.7 93 49.5
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 1.1e-18 96.7 93 49.5
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 1.1e-18 96.7 93 49.5
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 1.1e-18 96.7 93 49.5
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.4e-18 96.3 87 55.2
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.5e-17 91.7 122 41.8
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 7.7e-17 90.5 64 64.1
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 9.4e-15 83.6 67 65.7
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 2.1e-14 82.4 90 45.6
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.4e-10 68.9 94 40.4
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 3.1e-10 68.6 67 49.3
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 1.2e-09 66.6 50 64.0


User provided reference genes

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