Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 2.7e-203 711.8 375 100.0
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 2.3e-122 443.0 390 68.2
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 8.3e-112 407.9 378 64.6
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 2.2e-64 250.4 378 42.6
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 4.1e-58 229.6 380 40.8
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 4.1e-58 229.6 391 39.6
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 7.7e-57 225.3 389 40.1
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 1.3e-56 224.6 355 41.4
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 1.6e-54 217.6 374 40.6
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 4.7e-54 216.1 372 41.1
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 4.7e-54 216.1 374 40.6
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 6.1e-54 215.7 374 40.4
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 1.0e-53 214.9 396 39.4
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 2.3e-53 213.8 374 40.4
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 3.0e-53 213.4 389 37.8
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 2.6e-52 210.3 269 45.4
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 3.3e-52 209.9 385 40.0
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 7.4e-52 208.8 234 49.6
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 9.7e-52 208.4 383 38.4
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 2.8e-51 206.8 278 43.5
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 3.7e-51 206.5 387 37.0
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 9.1e-50 201.8 384 37.5
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 2.0e-49 200.7 209 51.7
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 1.0e-48 198.4 388 37.4
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 2.2e-48 197.2 383 39.4
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 1.1e-47 194.9 385 36.1
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 2.7e-46 190.3 395 35.9
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 4.7e-46 189.5 241 45.6
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 1.4e-45 188.0 283 41.0
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 3.0e-45 186.8 380 36.1
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 6.7e-45 185.7 389 33.9
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 8.8e-45 185.3 265 41.9
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.1e-44 184.9 387 35.1
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.0e-44 184.1 265 41.9
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 2.6e-44 183.7 227 45.8
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 4.4e-44 183.0 391 36.3
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 5.7e-44 182.6 377 38.5
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 1.7e-43 181.0 244 42.2
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 3.7e-43 179.9 244 41.8
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 3.7e-43 179.9 397 35.8
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 4.8e-43 179.5 244 41.8
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 8.2e-43 178.7 392 33.9
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.4e-42 177.9 387 33.6
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 2.4e-42 177.2 396 33.1
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 3.1e-42 176.8 272 42.3
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 5.3e-42 176.0 228 44.3
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 5.3e-42 176.0 223 44.4
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.6e-41 173.7 223 43.9
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 5.9e-41 172.6 223 43.9
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 6.5e-40 169.1 369 33.3
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 1.9e-39 167.5 377 36.1
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 3.2e-39 166.8 379 35.9
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 7.2e-39 165.6 382 33.8
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 1.2e-38 164.9 380 33.7
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 1.6e-38 164.5 425 33.9
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 1.6e-38 164.5 310 40.3
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.4e-37 161.4 272 38.2
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 1.2e-36 158.3 305 38.7
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 2.0e-36 157.5 381 33.9
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 2.6e-36 157.1 388 35.3
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 9.8e-36 155.2 330 37.0
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 8.3e-35 152.1 316 34.5
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 2.4e-34 150.6 391 35.8
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 5.4e-34 149.4 371 33.4
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 1.0e-32 145.2 325 37.8
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 1.3e-32 144.8 294 38.8
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 2.2e-32 144.1 305 37.0
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 5.0e-32 142.9 325 38.2
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 8.5e-32 142.1 323 37.2
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 1.5e-31 141.4 365 31.2
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 1.2e-30 138.3 344 35.2
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 1.2e-30 138.3 254 41.3
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 2.7e-30 137.1 321 33.6
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 6.1e-30 136.0 321 37.4
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 1.4e-29 134.8 353 34.0
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 4.0e-29 133.3 184 40.8
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 4.0e-29 133.3 333 34.5
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 5.2e-29 132.9 321 37.4
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 5.2e-29 132.9 321 37.4
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 2.0e-28 131.0 301 32.9
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 7.5e-28 129.0 304 36.5
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 1.7e-27 127.9 236 37.7
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 1.7e-27 127.9 156 44.2
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 4.9e-27 126.3 288 35.8
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 1.4e-26 124.8 339 31.0
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 2.0e-25 120.9 294 36.1
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 1.0e-24 118.6 158 42.4
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 7.5e-20 102.4 246 38.2
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 5.0e-16 89.7 219 36.5
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 6.2e-14 82.8 199 32.7
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 2.6e-12 77.4 371 29.6
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 4.4e-12 76.6 312 29.2
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 1.3e-11 75.1 225 30.2
Solyc08g082240.1 Solanum lycopersicum HOM05D007666 ORTHO05D009567 1.3e-11 75.1 94 45.7
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 3.7e-11 73.6 269 31.2
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 3.2e-10 70.5 322 27.6
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 3.2e-10 70.5 262 28.2
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 2.7e-09 67.4 273 25.3
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 1.7e-08 64.7 284 26.4
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 1.7e-08 64.7 232 28.0
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 3.0e-08 63.9 224 30.4
AagrBONN_evm.TU.Sc2ySwM_368.250 Anthoceros agrestis HOM05D029953 ORTHO05D009567 8.6e-08 62.4 211 25.6
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 8.6e-08 62.4 208 34.1
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 8.6e-08 62.4 359 25.6
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 3.3e-07 60.5 262 26.3
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 5.6e-07 59.7 228 28.5
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 7.3e-07 59.3 263 26.6
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 9.5e-07 58.9 214 28.5
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.2e-06 58.5 207 30.4
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 2.8e-06 57.4 200 28.5


User provided reference genes

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