Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0166481 Helianthus annuus HOM05D001832 ORTHO05D001861 2.7e-88 328.6 157 100.0
HanXRQChr06g0166471 Helianthus annuus HOM05D001832 ORTHO05D001861 6.0e-80 300.8 144 100.0
Lsat_1_v5_gn_3_10740 Lactuca sativa HOM05D001832 ORTHO05D001861 7.2e-41 171.0 143 58.7
Oeu044204.1 Olea europaea HOM05D001832 ORTHO05D001861 4.4e-30 135.2 139 49.6
vmacro07641 Vaccinium macrocarpon HOM05D001832 ORTHO05D001861 4.8e-29 131.7 144 45.1
Duzib128G0789 Durio zibethinus HOM05D001832 ORTHO05D001861 1.1e-28 130.6 144 47.9
Rhsim03G0046300 Rhododendron simsii HOM05D001832 ORTHO05D001861 1.1e-28 130.6 142 45.8
Thecc.05G240200 Theobroma cacao HOM05D001832 ORTHO05D001861 3.1e-28 129.0 141 46.1
Thecc.05G239700 Theobroma cacao HOM05D001832 ORTHO05D001861 1.2e-27 127.1 141 48.9
QL07p016717 Quercus lobata HOM05D001832 ORTHO05D001861 3.8e-26 122.1 128 45.3
Atru.chr2.1562 Acer truncatum HOM05D001832 ORTHO05D001861 1.9e-25 119.8 145 44.8
Phvul.001G107200 Phaseolus vulgaris HOM05D001832 ORTHO05D001861 2.5e-25 119.4 129 42.6
Cfa019868 Carpinus fangiana HOM05D001832 ORTHO05D001861 7.2e-25 117.9 146 42.5
TWI60G0618 Tripterygium wilfordii HOM05D001832 ORTHO05D001861 1.6e-24 116.7 136 41.2
CSS0034033 Camellia sinensis var. sinensis HOM05D001832 ORTHO05D001861 2.1e-24 116.3 152 42.8
Peaxi162Scf00575g00213 Petunia axillaris HOM05D001832 ORTHO05D001861 2.1e-24 116.3 143 42.0
VMungo1383G2186 Vigna mungo HOM05D001832 ORTHO05D001861 2.7e-24 115.9 127 41.7
CSS0030630 Camellia sinensis var. sinensis HOM05D001832 ORTHO05D001861 8.0e-24 114.4 152 42.8
Rhsim08G0193100 Rhododendron simsii HOM05D001832 ORTHO05D001861 1.0e-23 114.0 132 44.7
Lj1C1069T12 Lonicera japonica HOM05D001832 ORTHO05D001861 1.4e-23 113.6 134 44.0
Nitab4.5_0000613g0080 Nicotiana tabacum HOM05D001832 ORTHO05D001861 1.4e-23 113.6 152 38.2
Eucgr.A00041 Eucalyptus grandis HOM05D001832 ORTHO05D001861 1.8e-23 113.2 132 43.9
Haze_20389 Corylus avellana HOM05D001832 ORTHO05D001861 2.3e-23 112.8 147 41.5
C09p59400 Brassica napus HOM05D001832 ORTHO05D001597 3.0e-23 112.5 134 50.0
Ciclev10033414m.g Citrus clementina HOM05D001832 ORTHO05D001861 5.2e-23 111.7 144 40.3
Sp6g26470 Schrenkiella parvula HOM05D001832 ORTHO05D001861 5.2e-23 111.7 142 45.1
BcaB08g36745 Brassica carinata HOM05D001832 ORTHO05D001861 8.8e-23 110.9 134 44.8
Manes.08G151500 Manihot esculenta HOM05D001832 ORTHO05D001861 8.8e-23 110.9 142 40.1
AL6G28870 Arabidopsis lyrata HOM05D001832 ORTHO05D001861 1.5e-22 110.2 137 48.2
BolC9t58779H Brassica oleracea HOM05D001832 ORTHO05D001597 1.5e-22 110.2 134 49.3
Lj1g0026584 Lotus japonicus HOM05D001832 ORTHO05D001861 1.5e-22 110.2 131 44.3
COL.COLO4_04824 Corchorus olitorius HOM05D001832 ORTHO05D001861 2.0e-22 109.8 140 42.1
ClCG10G017050 Citrullus lanatus HOM05D001832 ORTHO05D001861 2.6e-22 109.4 140 42.1
Manes.08G151711 Manihot esculenta HOM05D001832 ORTHO05D001861 2.6e-22 109.4 137 43.8
MELO3C009679.2 Cucumis melo HOM05D001832 ORTHO05D001861 3.4e-22 109.0 134 44.8
MSTRG.26207 Avicennia marina HOM05D001832 ORTHO05D001861 4.4e-22 108.6 138 42.8
Thhalv10013634m.g Eutrema salsugineum HOM05D001832 ORTHO05D001861 4.4e-22 108.6 144 43.1
A10p21670 Brassica napus HOM05D001832 ORTHO05D001861 5.7e-22 108.2 135 48.1
TAR636G1376 Trochodendron aralioides HOM05D001832 ORTHO05D001861 5.7e-22 108.2 137 45.3
Aa31LG11G11800 Aethionema arabicum HOM05D001832 ORTHO05D001861 7.5e-22 107.8 140 44.3
AT5G17780 Arabidopsis thaliana HOM05D001832 ORTHO05D001861 7.5e-22 107.8 138 47.1
CANSAT78G0961 Cannabis sativa HOM05D001832 ORTHO05D001861 7.5e-22 107.8 124 44.4
Carub.0006s1601 Capsella rubella HOM05D001832 ORTHO05D001861 7.5e-22 107.8 135 48.1
Prupe.7G017500 Prunus persica HOM05D001832 ORTHO05D001861 7.5e-22 107.8 133 42.9
BraA10t44229Z Brassica rapa HOM05D001832 ORTHO05D001861 1.3e-21 107.1 137 46.7
Cpa.g.sc73.7 Carica papaya HOM05D001832 ORTHO05D001861 1.3e-21 107.1 148 42.6
Glyma.03G007100 Glycine max HOM05D001832 ORTHO05D001861 1.3e-21 107.1 125 40.8
arahy.Tifrunner.gnm1.ann1.T7IL5E Arachis hypogaea HOM05D001832 ORTHO05D001861 1.7e-21 106.7 131 42.0
Ciclev10031584m.g Citrus clementina HOM05D001832 ORTHO05D001861 1.7e-21 106.7 142 44.4
Duzib177G0898 Durio zibethinus HOM05D001832 ORTHO05D001861 1.7e-21 106.7 143 44.1
arahy.Tifrunner.gnm1.ann1.635IPP Arachis hypogaea HOM05D001832 ORTHO05D001861 2.2e-21 106.3 131 42.0
Dinv14566 Davidia involucrata HOM05D001832 ORTHO05D001861 2.8e-21 105.9 114 48.2
CsaV3_3G039340 Cucumis sativus L. HOM05D001832 ORTHO05D001861 3.7e-21 105.5 135 44.4
Gorai.013G113200 Gossypium raimondii HOM05D001832 ORTHO05D001861 4.8e-21 105.1 146 41.8
Manes.08G151600 Manihot esculenta HOM05D001832 ORTHO05D001861 6.3e-21 104.8 137 40.9
Gohir.D13G101100 Gossypium hirsutum HOM05D001832 ORTHO05D001861 8.3e-21 104.4 142 42.3
Medtr7g087070 Medicago truncatula HOM05D001832 ORTHO05D001861 8.3e-21 104.4 145 42.1
Solyc10g081450.2 Solanum lycopersicum HOM05D001832 ORTHO05D001861 1.4e-20 103.6 129 45.0
Sopen10g031950 Solanum pennellii HOM05D001832 ORTHO05D001861 1.4e-20 103.6 129 45.0
DCAR_020642 Daucus carota HOM05D001832 ORTHO05D001861 2.4e-20 102.8 130 42.3
PSO339G0620 Papaver somniferum HOM05D001832 ORTHO05D001861 3.1e-20 102.4 138 42.0
PGR042G3786 Punica granatum HOM05D001832 ORTHO05D001861 3.1e-20 102.4 145 38.6
PGSC0003DMG400028124 Solanum tuberosum HOM05D001832 ORTHO05D001861 4.1e-20 102.1 134 41.8
Migut.K00218 Erythranthe guttata HOM05D001832 ORTHO05D001861 5.4e-20 101.7 142 40.1
Psat3g085520 Pisum sativum HOM05D001832 ORTHO05D001861 7.7e-19 97.8 136 39.0
Gorai.011G272800 Gossypium raimondii HOM05D001832 ORTHO05D001861 3.8e-18 95.5 131 42.7
HPP92_014372 Vanilla planifolia HOM05D001832 ORTHO05D001861 3.8e-18 95.5 129 41.1
Gohir.D10G238396 Gossypium hirsutum HOM05D001832 ORTHO05D001861 5.0e-18 95.1 131 42.7
CARHR195390 Cardamine hirsuta HOM05D001832 ORTHO05D001861 6.5e-18 94.7 136 42.6
Gorai.013G196600 Gossypium raimondii HOM05D001832 ORTHO05D001861 6.5e-18 94.7 125 43.2
Nn2g14621 Nelumbo nucifera HOM05D001832 ORTHO05D001861 6.5e-18 94.7 132 39.4
Gohir.D13G165900 Gossypium hirsutum HOM05D001832 ORTHO05D001861 1.5e-17 93.6 131 42.7
TPR.G7840 Trifolium pratense HOM05D001832 ORTHO05D001861 1.5e-17 93.6 126 41.3
Hund15182 Selenicereus undatus HOM05D001832 ORTHO05D001861 2.5e-17 92.8 142 40.1
Duzib128G0124 Durio zibethinus HOM05D001832 ORTHO05D001861 4.2e-17 92.0 140 42.1
Ca_03445_v3 Cicer arietinum L. HOM05D001832 ORTHO05D001861 5.5e-17 91.7 129 40.3
THA.LOC104827251 Tarenaya hassleriana HOM05D001832 ORTHO05D001861 2.8e-16 89.4 139 40.3
PSO386G0276 Papaver somniferum HOM05D001832 ORTHO05D001861 3.6e-16 89.0 133 38.3
FAN27G1476 Fragaria x ananassa HOM05D001832 ORTHO05D001861 4.7e-16 88.6 130 37.7
AUR62037058 Chenopodium quinoa HOM05D001832 ORTHO05D001861 8.0e-16 87.8 114 41.2
FvH4_2g19930 Fragaria vesca HOM05D001832 ORTHO05D001861 1.8e-15 86.7 124 38.7
FAN15G1900 Fragaria x ananassa HOM05D001832 ORTHO05D001861 1.8e-15 86.7 130 36.9
FAN24G0644 Fragaria x ananassa HOM05D001832 ORTHO05D001861 1.8e-15 86.7 124 38.7
Sc07g0007640 Simmondsia chinensis HOM05D001832 ORTHO05D001861 1.8e-15 86.7 131 39.7
HPP92_028188 Vanilla planifolia HOM05D001832 ORTHO05D001861 1.8e-15 86.7 142 34.5
ATR0068G068 Amborella trichopoda HOM05D001832 ORTHO05D001861 2.3e-15 86.3 139 38.8
CDE06G2015 Ceratophyllum demersum HOM05D001832 ORTHO05D001861 1.2e-14 84.0 113 39.8
RcHm_v2.0_Chr3g0495891 Rosa chinensis HOM05D001832 ORTHO05D001861 2.0e-14 83.2 135 34.8
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 5.7e-14 81.6 47 80.9
Thhalv10015368m.g Eutrema salsugineum HOM05D001832 ORTHO05D001861 9.8e-14 80.9 137 36.5
BcaC04g18764 Brassica carinata HOM05D001832 ORTHO05D001861 1.3e-13 80.5 134 34.3
BolC9t58783H Brassica oleracea HOM05D001832 ORTHO05D001861 1.3e-13 80.5 134 34.3
Aa31LG11G11830 Aethionema arabicum HOM05D001832 ORTHO05D001861 1.7e-13 80.1 155 36.1
AT5G17720 Arabidopsis thaliana HOM05D001832 ORTHO05D001861 1.7e-13 80.1 133 36.1
BcaB08g36748 Brassica carinata HOM05D001832 ORTHO05D001861 2.8e-13 79.3 137 33.6
C09p59430 Brassica napus HOM05D001832 ORTHO05D001861 2.8e-13 79.3 134 33.6
Sp6g26500 Schrenkiella parvula HOM05D001832 ORTHO05D001861 2.8e-13 79.3 137 35.0
Lalb_Chr22g0358471 Lupinus albus HOM05D001832 ORTHO05D001861 4.9e-13 78.6 75 52.0
AL6G28810 Arabidopsis lyrata HOM05D001832 ORTHO05D001861 3.1e-12 75.9 137 35.0
A10p21700 Brassica napus HOM05D001832 ORTHO05D001861 3.1e-12 75.9 134 32.8
BraA10t44231Z Brassica rapa HOM05D001832 ORTHO05D001861 3.1e-12 75.9 134 32.8
Sed0023868 Sechium edule HOM05D001832 ORTHO05D001861 5.4e-12 75.1 131 32.1
C02p09310 Brassica napus HOM05D001832 ORTHO05D001861 7.0e-12 74.7 128 35.2
BolC2t06839H Brassica oleracea HOM05D001832 ORTHO05D001861 7.0e-12 74.7 128 35.2
Aa31LG11G11840 Aethionema arabicum HOM05D001832 ORTHO05D001861 4.5e-11 72.0 135 33.3
THA.LOC104820804 Tarenaya hassleriana HOM05D001832 ORTHO05D001861 4.5e-11 72.0 133 34.6
CARHR195460 Cardamine hirsuta HOM05D001832 ORTHO05D001861 2.9e-10 69.3 153 30.7
Glyma.03G007050 Glycine max HOM05D001832 ORTHO05D001861 4.3e-09 65.5 78 46.2
unitig_746.g26558 Utricularia gibba HOM05D001832 ORTHO05D001861 4.3e-09 65.5 127 29.1
SEGI_14346 Sequoiadendron giganteum HOM05D001832 ORTHO05D001861 9.5e-09 64.3 116 36.2
Os07g0685500 Oryza sativa ssp. japonica HOM05D001832 ORTHO05D001861 2.1e-08 63.2 118 30.5
GSVIVG01029938001 Vitis vinifera HOM05D001832 ORTHO05D001861 2.1e-08 63.2 58 50.0
CAN.G128.142 Capsicum annuum HOM05D001832 ORTHO05D001861 2.8e-08 62.8 101 35.6
SalBow1G0057 Salvia bowleyana HOM05D001832 ORTHO05D001861 3.6e-08 62.4 134 31.3
Sc22g0004680 Simmondsia chinensis HOM05D001832 ORTHO05D001861 3.0e-07 59.3 146 28.1
Aqoxy1G00011 Aquilegia oxysepala HOM05D001832 ORTHO05D001861 4.0e-07 58.9 192 29.2
BcaC03g13539 Brassica carinata HOM05D001832 ORTHO05D001861 6.8e-07 58.2 106 34.0
Cc06_g21610 Coffea canephora HOM05D001832 ORTHO05D001861 1.5e-06 57.0 30 70.0
Peaxi162Scf00575g00314 Petunia axillaris HOM05D001832 ORTHO05D001861 1.5e-06 57.0 33 66.7


User provided reference genes

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