Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 8.6e-141 503.8 288 100.0
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 1.1e-98 364.0 252 84.5
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 2.3e-85 319.7 290 69.7
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 1.4e-66 257.3 299 58.9
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 2.4e-66 256.5 289 58.5
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 2.4e-66 256.5 316 56.6
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 8.5e-64 248.1 310 55.2
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 8.5e-64 248.1 311 55.6
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 1.1e-63 247.7 303 56.4
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 1.4e-63 247.3 303 52.8
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 2.5e-63 246.5 291 57.4
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 4.2e-63 245.7 310 53.9
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 5.5e-63 245.4 302 54.3
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 1.2e-62 244.2 287 56.1
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 1.6e-62 243.8 314 54.5
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 2.7e-62 243.0 296 55.4
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.8e-61 240.4 311 54.0
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 3.9e-61 239.2 311 54.3
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 8.8e-61 238.0 304 53.3
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 8.8e-61 238.0 304 55.9
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 2.6e-60 236.5 291 54.6
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 3.3e-60 236.1 291 52.6
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 7.4e-60 235.0 295 54.2
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 1.3e-59 234.2 283 54.4
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 1.7e-59 233.8 290 53.8
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 2.2e-59 233.4 304 53.3
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 3.7e-59 232.6 307 53.4
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 4.8e-59 232.3 295 54.2
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 2.4e-58 229.9 299 55.5
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 4.1e-58 229.2 299 53.2
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 1.2e-57 227.6 308 51.9
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 4.5e-57 225.7 320 50.3
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 5.9e-57 225.3 307 50.5
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 5.9e-57 225.3 292 51.7
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 7.7e-57 224.9 293 52.9
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 7.7e-57 224.9 282 54.6
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.7e-56 223.8 293 51.2
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 2.2e-56 223.4 289 55.0
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 1.1e-55 221.1 293 52.6
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 1.5e-55 220.7 317 52.1
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.9e-55 220.3 293 50.9
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 4.2e-55 219.2 301 51.8
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 9.4e-55 218.0 293 50.9
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 9.4e-55 218.0 298 51.7
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 1.2e-54 217.6 310 49.7
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 6.7e-53 211.8 312 50.3
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 2.0e-52 210.3 308 49.7
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 4.4e-52 209.1 292 52.7
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 9.7e-52 208.0 290 49.7
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 1.3e-51 207.6 290 50.7
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 4.8e-51 205.7 321 47.0
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 1.4e-50 204.1 278 48.6
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 1.4e-50 204.1 279 52.0
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 4.1e-50 202.6 309 48.5
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 1.7e-48 197.2 259 50.6
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.7e-48 197.2 292 50.3
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 2.9e-48 196.4 277 49.8
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 3.8e-48 196.1 299 47.8
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 1.1e-47 194.5 298 45.6
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 1.1e-47 194.5 301 45.8
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 1.1e-47 194.5 262 51.5
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 1.5e-47 194.1 290 51.0
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 3.2e-47 193.0 283 49.5
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 5.5e-47 192.2 294 46.9
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 9.4e-47 191.4 276 49.6
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 2.1e-46 190.3 296 45.3
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 3.6e-46 189.5 308 48.1
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 8.0e-46 188.3 302 45.0
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 4.0e-45 186.0 251 49.4
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 5.2e-45 185.7 235 55.3
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 8.8e-45 184.9 277 47.7
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 8.8e-45 184.9 295 46.4
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 8.8e-45 184.9 287 48.8
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 1.5e-44 184.1 295 46.1
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 2.6e-44 183.3 277 47.3
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 4.4e-44 182.6 306 47.7
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 4.4e-44 182.6 306 47.7
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 9.8e-44 181.4 271 49.8
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 3.7e-43 179.5 290 46.9
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 1.4e-42 177.6 308 44.5
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 2.7e-41 173.3 257 48.2
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 5.9e-41 172.2 230 53.9
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 1.2e-38 164.5 226 55.3
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.1e-38 163.7 247 47.4
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 2.8e-38 163.3 275 45.1
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.5e-36 157.5 247 42.5
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 7.5e-36 155.2 304 40.8
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 7.5e-36 155.2 244 47.1
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.3e-35 154.5 203 54.2
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 4.9e-35 152.5 224 51.3
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 7.0e-34 148.7 242 43.8
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.0e-32 144.8 220 47.7
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 3.8e-32 142.9 258 43.8
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 1.6e-30 137.5 227 41.4
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 3.6e-30 136.3 290 40.7
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 1.5e-28 131.0 273 38.5
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 4.9e-27 125.9 208 41.8
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 2.0e-25 120.6 77 81.8
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 7.8e-25 118.6 274 37.2
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.0e-24 118.2 218 44.5
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 4.3e-23 112.8 219 38.4
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 2.7e-17 93.6 189 38.1
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 3.5e-17 93.2 301 34.9
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 1.3e-16 91.3 77 68.8
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 2.5e-15 87.0 194 34.0
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 1.8e-13 80.9 268 29.9
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 4.0e-13 79.7 110 56.4
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.7e-11 74.3 79 53.2
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 6.4e-11 72.4 279 36.6
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 1.4e-10 71.2 138 42.0
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 1.4e-10 71.2 221 29.0
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 3.2e-10 70.1 283 28.3
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 3.9e-08 63.2 319 30.4
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.9e-07 60.8 89 55.1


User provided reference genes

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