Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0163901 Helianthus annuus HOM05D003866 ORTHO05D004508 3.3e-164 581.6 291 100.0
Lsat_1_v5_gn_8_54720 Lactuca sativa HOM05D003866 ORTHO05D004508 9.7e-116 420.6 233 89.3
HanXRQChr04g0118161 Helianthus annuus HOM05D003866 ORTHO05D004508 8.5e-112 407.5 233 86.3
ECA236G1731 Erigeron canadensis HOM05D003866 ORTHO05D004508 3.2e-111 405.6 233 83.7
Atru.chr5.1203 Acer truncatum HOM05D003866 ORTHO05D004508 6.3e-99 364.8 229 74.7
CiPaw.08G097800 Carya illinoinensis HOM05D003866 ORTHO05D004508 1.4e-98 363.6 228 76.3
CSS0038127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 3.1e-98 362.5 229 75.1
Dinv33030 Davidia involucrata HOM05D003866 ORTHO05D004508 7.0e-98 361.3 229 75.5
TWI14G1088 Tripterygium wilfordii HOM05D003866 ORTHO05D004508 4.5e-97 358.6 234 74.8
Lj1A33G82 Lonicera japonica HOM05D003866 ORTHO05D004508 5.9e-97 358.2 223 76.7
Eucgr.K03458 Eucalyptus grandis HOM05D003866 ORTHO05D004508 1.7e-96 356.7 227 75.3
GSVIVG01027965001 Vitis vinifera HOM05D003866 ORTHO05D004508 2.9e-96 355.9 227 76.2
Haze_04883 Corylus avellana HOM05D003866 ORTHO05D004508 5.0e-96 355.1 228 73.2
Rhsim13G0013000 Rhododendron simsii HOM05D003866 ORTHO05D004508 8.5e-96 354.4 229 73.4
Cc01_g20600 Coffea canephora HOM05D003866 ORTHO05D004508 1.1e-95 354.0 229 74.2
Dinv19723 Davidia involucrata HOM05D003866 ORTHO05D004508 1.1e-95 354.0 229 74.7
MD03G1282400 Malus domestica HOM05D003866 ORTHO05D004508 1.4e-95 353.6 257 68.1
vmacro02471 Vaccinium macrocarpon HOM05D003866 ORTHO05D004508 1.9e-95 353.2 227 74.0
CSS0036127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 4.2e-95 352.1 229 73.4
Cfa005958 Carpinus fangiana HOM05D003866 ORTHO05D004508 4.2e-95 352.1 228 73.2
Cc01_g06400 Coffea canephora HOM05D003866 ORTHO05D004508 5.5e-95 351.7 229 73.8
MD11G1303900 Malus domestica HOM05D003866 ORTHO05D004508 7.2e-95 351.3 229 73.8
arahy.Tifrunner.gnm1.ann1.44W6WI Arachis hypogaea HOM05D003866 ORTHO05D004508 9.4e-95 350.9 230 72.2
Lalb_Chr04g0259781 Lupinus albus HOM05D003866 ORTHO05D004508 3.6e-94 349.0 228 72.4
MSTRG.18171 Avicennia marina HOM05D003866 ORTHO05D004508 8.0e-94 347.8 230 73.5
CANSAT25G0267 Cannabis sativa HOM05D003866 ORTHO05D004508 8.0e-94 347.8 230 71.3
RhsimUnG0168700 Rhododendron simsii HOM05D003866 ORTHO05D004508 1.0e-93 347.4 229 72.5
TAR636G2430 Trochodendron aralioides HOM05D003866 ORTHO05D004508 1.4e-93 347.1 228 72.8
Ca_09142_v3 Cicer arietinum L. HOM05D003866 ORTHO05D004508 1.8e-93 346.7 227 72.2
Prupe.8G257100 Prunus persica HOM05D003866 ORTHO05D004508 1.8e-93 346.7 228 73.2
CANSAT25G2840 Cannabis sativa HOM05D003866 ORTHO05D004508 2.3e-93 346.3 230 71.3
Lj1g0017340 Lotus japonicus HOM05D003866 ORTHO05D004508 2.3e-93 346.3 231 70.1
Lj2A1190T61 Lonicera japonica HOM05D003866 ORTHO05D004508 3.0e-93 345.9 228 73.7
Oeu024509.1 Olea europaea HOM05D003866 ORTHO05D004508 3.9e-93 345.5 229 72.5
Sopen11g008460 Solanum pennellii HOM05D003866 ORTHO05D004508 3.9e-93 345.5 227 73.1
PGSC0003DMG400027789 Solanum tuberosum HOM05D003866 ORTHO05D004508 3.9e-93 345.5 227 72.7
Potri.010G206900 Populus trichocarpa HOM05D003866 ORTHO05D004508 5.2e-93 345.1 227 72.7
Ciclev10022066m.g Citrus clementina HOM05D003866 ORTHO05D004508 6.7e-93 344.7 228 71.5
Lj1C0G2 Lonicera japonica HOM05D003866 ORTHO05D004508 1.1e-92 344.0 240 70.4
Nitab4.5_0004737g0020 Nicotiana tabacum HOM05D003866 ORTHO05D004508 1.1e-92 344.0 227 72.2
Actinidia24328 Actinidia chinensis HOM05D003866 ORTHO05D004508 1.5e-92 343.6 229 72.9
RcHm_v2.0_Chr5g0006471 Rosa chinensis HOM05D003866 ORTHO05D004508 2.0e-92 343.2 228 73.2
SGA_v2.0_scaffold1G00383 Striga asiatica HOM05D003866 ORTHO05D004508 2.0e-92 343.2 229 72.9
Solyc11g013460.2 Solanum lycopersicum HOM05D003866 ORTHO05D004508 2.6e-92 342.8 232 71.6
FAN15G0670 Fragaria x ananassa HOM05D003866 ORTHO05D004508 3.3e-92 342.4 229 73.4
RcHm_v2.0_Chr6g0293371 Rosa chinensis HOM05D003866 ORTHO05D004508 4.4e-92 342.0 228 73.7
SalBow2G1869 Salvia bowleyana HOM05D003866 ORTHO05D004508 7.4e-92 341.3 235 70.6
Migut.I00105 Erythranthe guttata HOM05D003866 ORTHO05D004508 2.8e-91 339.3 227 72.2
Peaxi162Scf00140g01011 Petunia axillaris HOM05D003866 ORTHO05D004508 3.7e-91 339.0 228 71.5
Glyma.19G209400 Glycine max HOM05D003866 ORTHO05D004508 4.8e-91 338.6 223 71.7
FvH4_3g05411 Fragaria vesca HOM05D003866 ORTHO05D004508 6.3e-91 338.2 228 73.2
Cpa.g.sc11.50 Carica papaya HOM05D003866 ORTHO05D004508 8.2e-91 337.8 233 70.0
Nitab4.5_0000051g0210 Nicotiana tabacum HOM05D003866 ORTHO05D004508 8.2e-91 337.8 227 71.8
Aqoxy5G00709 Aquilegia oxysepala HOM05D003866 ORTHO05D004508 1.1e-90 337.4 228 69.7
MBI19_g41921_MAGBIO Magnolia biondii HOM05D003866 ORTHO05D004508 1.4e-90 337.0 229 69.0
DCAR_024209 Daucus carota HOM05D003866 ORTHO05D004508 1.8e-90 336.7 229 70.7
Medtr2g014120 Medicago truncatula HOM05D003866 ORTHO05D004508 1.8e-90 336.7 228 69.7
FvH4_2g25231 Fragaria vesca HOM05D003866 ORTHO05D004508 2.4e-90 336.3 228 72.4
Glyma.03G212300 Glycine max HOM05D003866 ORTHO05D004508 2.4e-90 336.3 223 70.0
Medtr7g108540 Medicago truncatula HOM05D003866 ORTHO05D004508 2.4e-90 336.3 228 69.7
arahy.Tifrunner.gnm1.ann1.AT77GA Arachis hypogaea HOM05D003866 ORTHO05D004508 5.3e-90 335.1 230 70.0
FAN11G1587 Fragaria x ananassa HOM05D003866 ORTHO05D004508 7.0e-90 334.7 258 66.3
Phvul.001G205200 Phaseolus vulgaris HOM05D003866 ORTHO05D004508 7.0e-90 334.7 223 69.5
TAR365G0487 Trochodendron aralioides HOM05D003866 ORTHO05D004508 1.2e-89 334.0 228 70.6
FvH4_7g06070 Fragaria vesca HOM05D003866 ORTHO05D004508 1.6e-89 333.6 228 71.1
Nn4g25882 Nelumbo nucifera HOM05D003866 ORTHO05D004508 2.0e-89 333.2 223 72.2
CsaV3_4G000530 Cucumis sativus L. HOM05D003866 ORTHO05D004508 2.6e-89 332.8 227 66.5
Manes.13G006100 Manihot esculenta HOM05D003866 ORTHO05D004508 3.5e-89 332.4 229 69.4
Psat3g022720 Pisum sativum HOM05D003866 ORTHO05D004508 3.5e-89 332.4 227 70.0
TPR.G9596 Trifolium pratense HOM05D003866 ORTHO05D004508 3.5e-89 332.4 227 69.2
unitig_8.g3710 Utricularia gibba HOM05D003866 ORTHO05D004508 3.5e-89 332.4 223 70.9
AL4G21480 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 5.9e-89 331.6 228 68.9
AT2G27490 Arabidopsis thaliana HOM05D003866 ORTHO05D004508 5.9e-89 331.6 228 68.4
CAN.G337.118 Capsicum annuum HOM05D003866 ORTHO05D004508 1.0e-88 330.9 227 70.0
RcHm_v2.0_Chr7g0221651 Rosa chinensis HOM05D003866 ORTHO05D004508 1.0e-88 330.9 228 69.7
VMungo1383G2803 Vigna mungo HOM05D003866 ORTHO05D004508 1.0e-88 330.9 224 69.6
PGSC0003DMG400027790 Solanum tuberosum HOM05D003866 ORTHO05D004508 1.7e-88 330.1 227 70.0
BcaB01g03075 Brassica carinata HOM05D003866 ORTHO05D004508 2.2e-88 329.7 228 68.9
Thhalv10017203m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 2.9e-88 329.3 228 68.9
Sabra08G0038800 Salix brachista HOM05D003866 ORTHO05D004508 3.8e-88 328.9 233 68.7
Sed0016300 Sechium edule HOM05D003866 ORTHO05D004508 3.8e-88 328.9 227 67.0
FAN27G2002 Fragaria x ananassa HOM05D003866 ORTHO05D004508 6.5e-88 328.2 229 71.6
Manes.12G006300 Manihot esculenta HOM05D003866 ORTHO05D004508 6.5e-88 328.2 229 69.4
Sp4g10360 Schrenkiella parvula HOM05D003866 ORTHO05D004508 6.5e-88 328.2 228 67.1
TAR365G0990 Trochodendron aralioides HOM05D003866 ORTHO05D004508 8.5e-88 327.8 218 72.9
BolC3t15527H Brassica oleracea HOM05D003866 ORTHO05D004508 1.1e-87 327.4 228 67.5
Prupe.6G179600 Prunus persica HOM05D003866 ORTHO05D004508 1.1e-87 327.4 223 70.9
EL10Ac4g07959 Beta vulgaris HOM05D003866 ORTHO05D004508 2.5e-87 326.2 228 69.3
A03p26580 Brassica napus HOM05D003866 ORTHO05D004508 2.5e-87 326.2 228 67.1
BcaC01g04944 Brassica carinata HOM05D003866 ORTHO05D004508 3.2e-87 325.9 228 67.1
C03p31840 Brassica napus HOM05D003866 ORTHO05D004508 4.2e-87 325.5 228 66.7
Aa31LG5G8830 Aethionema arabicum HOM05D003866 ORTHO05D004508 5.5e-87 325.1 229 67.7
A07p18280 Brassica napus HOM05D003866 ORTHO05D004508 9.4e-87 324.3 226 67.7
Hund18125 Selenicereus undatus HOM05D003866 ORTHO05D004508 1.2e-86 323.9 227 69.6
BraA03t11870Z Brassica rapa HOM05D003866 ORTHO05D004508 1.6e-86 323.6 228 66.7
CARHR120140 Cardamine hirsuta HOM05D003866 ORTHO05D004508 2.7e-86 322.8 228 67.5
Duzib133G0502 Durio zibethinus HOM05D003866 ORTHO05D004508 8.0e-86 321.2 228 66.7
PGR031G3621 Punica granatum HOM05D003866 ORTHO05D004508 8.0e-86 321.2 263 61.2
COL.COLO4_23391 Corchorus olitorius HOM05D003866 ORTHO05D004508 1.0e-85 320.9 233 66.1
Gohir.D12G010300 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.0e-85 320.9 227 67.4
Gohir.A12G010200 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.4e-85 320.5 228 67.1
PSO832G2724 Papaver somniferum HOM05D003866 ORTHO05D004508 1.4e-85 320.5 227 69.2
Gorai.008G010300 Gossypium raimondii HOM05D003866 ORTHO05D004508 1.8e-85 320.1 228 67.1
AUR62022186 Chenopodium quinoa HOM05D003866 ORTHO05D004508 2.3e-85 319.7 228 69.3
PSO210G0692 Papaver somniferum HOM05D003866 ORTHO05D004508 4.0e-85 318.9 227 70.0
Gohir.D04G003400 Gossypium hirsutum HOM05D003866 ORTHO05D004508 8.8e-85 317.8 228 65.8
FAN24G3471 Fragaria x ananassa HOM05D003866 ORTHO05D004508 1.5e-84 317.0 202 76.2
Gorai.012G004500 Gossypium raimondii HOM05D003866 ORTHO05D004508 2.0e-84 316.6 228 65.4
Thhalv10017190m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 3.3e-84 315.8 228 65.8
AUR62031891 Chenopodium quinoa HOM05D003866 ORTHO05D004508 9.7e-84 314.3 228 68.4
Os01g0360600 Oryza sativa ssp. japonica HOM05D003866 ORTHO05D004508 1.7e-83 313.5 227 63.0
ATR0706G042 Amborella trichopoda HOM05D003866 ORTHO05D004508 4.8e-83 312.0 223 66.4
ClCG10G010790 Citrullus lanatus HOM05D003866 ORTHO05D004508 2.4e-82 309.7 310 51.0
Sp4g10280 Schrenkiella parvula HOM05D003866 ORTHO05D004508 9.1e-82 307.8 228 65.4
Zm00001eb041190 Zea mays HOM05D003866 ORTHO05D004508 1.2e-81 307.4 227 63.4
Carub.0004s0812 Capsella rubella HOM05D003866 ORTHO05D004508 1.0e-80 304.3 204 70.1
FAN10G2101 Fragaria x ananassa HOM05D003866 ORTHO05D004508 1.9e-79 300.1 228 66.2
BcaB02g10095 Brassica carinata HOM05D003866 ORTHO05D004508 1.6e-78 297.0 229 62.9
arahy.Tifrunner.gnm1.ann1.9DBC1D Arachis hypogaea HOM05D003866 ORTHO05D004508 4.7e-78 295.4 233 64.8
CDE09G0414 Ceratophyllum demersum HOM05D003866 ORTHO05D004508 8.0e-78 294.7 221 62.4
Thecc.01G295900 Theobroma cacao HOM05D003866 ORTHO05D004508 2.6e-76 289.7 214 63.1
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 4.4e-76 288.9 192 72.9
Sabra10G0159700 Salix brachista HOM05D003866 ORTHO05D002218 1.1e-74 284.3 197 70.1
RcHm_v2.0_Chr1g0333581 Rosa chinensis HOM05D003866 ORTHO05D004508 3.1e-74 282.7 231 62.3
SEGI_05441 Sequoiadendron giganteum HOM05D003866 ORTHO05D004508 7.0e-74 281.6 223 62.8
Gohir.A05G412600 Gossypium hirsutum HOM05D003866 ORTHO05D004508 7.7e-73 278.1 220 60.9
Hund18126 Selenicereus undatus HOM05D003866 ORTHO05D004508 4.7e-70 268.9 195 66.2
Actinidia32233 Actinidia chinensis HOM05D003866 ORTHO05D004508 4.9e-67 258.8 181 69.1
AL8G17300 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 4.5e-65 252.3 238 55.9
SGA_v2.0_scaffold25G10945 Striga asiatica HOM05D003866 ORTHO05D004508 1.7e-64 250.4 182 70.3
RcHm_v2.0_Chr1g0334201 Rosa chinensis HOM05D003866 ORTHO05D004508 5.2e-61 238.8 148 75.7
Pp3c2_13260 Physcomitrium patens HOM05D003866 ORTHO05D004508 4.4e-60 235.7 223 51.6
Mapoly0028s0053 Marchantia polymorpha HOM05D003866 ORTHO05D004508 2.9e-59 233.0 219 51.1
Nn4g25856 Nelumbo nucifera HOM05D003866 ORTHO05D004508 3.2e-58 229.6 213 55.9
Potri.008G053601 Populus trichocarpa HOM05D003866 ORTHO05D004508 1.0e-56 224.6 133 77.4
SMO144G0118 Selaginella moellendorffii HOM05D003866 ORTHO05D004508 5.0e-56 222.2 225 50.7
FAN25G0878 Fragaria x ananassa HOM05D003866 ORTHO05D004508 8.6e-56 221.5 144 72.2
AagrBONN_evm.TU.Sc2ySwM_228.2237 Anthoceros agrestis HOM05D003866 ORTHO05D004508 1.1e-55 221.1 220 50.0
FAN20G0831 Fragaria x ananassa HOM05D003866 ORTHO05D004508 3.7e-51 206.1 124 78.2
EL10Ac1g00209 Beta vulgaris HOM05D003866 ORTHO05D004508 6.6e-48 195.3 169 58.0
MD12G1063200 Malus domestica HOM05D003866 ORTHO05D004508 7.3e-47 191.8 144 63.2
Sc03g0003210 Simmondsia chinensis HOM05D003866 ORTHO05D004508 2.6e-44 183.3 143 64.3
BcaC02g10889 Brassica carinata HOM05D003866 ORTHO05D004508 5.8e-44 182.2 140 59.3
Carub.0001s3498 Capsella rubella HOM05D003866 ORTHO05D004508 9.9e-44 181.4 134 65.7
RcHm_v2.0_Chr1g0333491 Rosa chinensis HOM05D003866 ORTHO05D004508 6.4e-43 178.7 116 73.3
arahy.Tifrunner.gnm1.ann1.ZE4P1V Arachis hypogaea HOM05D003866 ORTHO05D004508 1.1e-42 177.9 147 60.5
SHI02446 Sapria himalayana HOM05D003866 ORTHO05D004508 1.6e-41 174.1 146 62.3
Zm00001eb341290 Zea mays HOM05D003866 ORTHO05D004508 3.5e-41 172.9 142 57.0
Cre10.g436150 Chlamydomonas reinhardtii HOM05D003866 ORTHO05D004508 1.5e-39 167.5 218 40.4
RcHm_v2.0_Chr4g0419041 Rosa chinensis HOM05D003866 ORTHO05D004508 1.2e-36 157.9 126 62.7
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 2.0e-36 157.1 183 44.3
arahy.Tifrunner.gnm1.ann1.86SF76 Arachis hypogaea HOM05D003866 ORTHO05D004508 4.2e-34 149.4 156 52.6
Oeu047454.1 Olea europaea HOM05D003866 ORTHO05D004508 2.7e-33 146.7 85 80.0
HPP92_010697 Vanilla planifolia HOM05D001483 ORTHO05D001463 4.6e-33 146.0 197 42.1
BolC4t23901H Brassica oleracea HOM05D003866 ORTHO05D004508 1.3e-32 144.4 109 67.0
GSVIVG01010954001 Vitis vinifera HOM05D003866 ORTHO05D004508 3.3e-31 139.8 88 75.0
QL12p026964 Quercus lobata HOM05D003866 ORTHO05D004508 5.6e-31 139.0 85 75.3
BraA07t29544Z Brassica rapa HOM05D003866 ORTHO05D004508 7.3e-31 138.7 102 68.6
MSTRG.21619 Avicennia marina HOM05D003866 ORTHO05D004508 3.1e-29 133.3 91 70.3
Psat5g098240 Pisum sativum HOM05D001063 ORTHO05D000986 2.6e-28 130.2 135 51.1
BcaC02g10888 Brassica carinata HOM05D003866 ORTHO05D004508 3.4e-28 129.8 82 76.8
CAN.G174.11 Capsicum annuum HOM05D003866 ORTHO05D004508 9.9e-28 128.3 86 70.9
arahy.Tifrunner.gnm1.ann1.VNWS1A Arachis hypogaea HOM05D003866 ORTHO05D004508 1.3e-27 127.9 106 58.5
C04p24060 Brassica napus HOM05D003866 ORTHO05D004508 1.4e-26 124.4 95 66.3
ClCG10G010800 Citrullus lanatus HOM05D003866 ORTHO05D004508 1.9e-26 124.0 85 65.9
CAN.G255.6 Capsicum annuum HOM05D003866 ORTHO05D004508 4.6e-25 119.4 77 75.3
SEGI_13628 Sequoiadendron giganteum HOM05D003866 ORTHO05D004508 6.6e-24 115.5 86 66.3
QL12p026975 Quercus lobata HOM05D003866 ORTHO05D004508 9.6e-23 111.7 74 73.0
FvH4_3g05410 Fragaria vesca HOM05D003866 ORTHO05D004508 1.6e-22 110.9 79 69.6
CAN.G255.7 Capsicum annuum HOM05D003866 ORTHO05D004508 2.4e-21 107.1 106 54.7
FAN06G0461 Fragaria x ananassa HOM05D003866 ORTHO05D004508 2.4e-21 107.1 86 60.5
RcHm_v2.0_Chr6g0258301 Rosa chinensis HOM05D003866 ORTHO05D004508 3.4e-20 103.2 145 41.4
arahy.Tifrunner.gnm1.ann1.TVUZ4W Arachis hypogaea HOM05D003866 ORTHO05D004508 1.6e-17 94.4 100 54.0
DCAR_024210 Daucus carota HOM05D003866 ORTHO05D004508 3.5e-17 93.2 61 68.9
MD14G1128400 Malus domestica HOM05D003866 ORTHO05D004508 4.6e-17 92.8 55 74.5
RcHm_v2.0_Chr4g0419031 Rosa chinensis HOM05D003866 ORTHO05D004508 6.7e-16 89.0 85 57.6
PRCOL_00003268 Prasinoderma coloniale HOM05D003001 ORTHO05D003494 1.9e-15 87.4 184 29.3
ClCG10G010610 Citrullus lanatus HOM05D003866 ORTHO05D004508 8.1e-14 82.0 64 60.9
MCO11G607 Micromonas commoda HOM05D003866 ORTHO05D004508 8.1e-14 82.0 220 27.7
HanXRQChr04g0118191 Helianthus annuus HOM05D003866 ORTHO05D004508 1.4e-13 81.3 67 59.7
RcHm_v2.0_Chr1g0333451 Rosa chinensis HOM05D003866 ORTHO05D004508 5.3e-13 79.3 60 66.7
SHI02445 Sapria himalayana HOM05D003866 ORTHO05D004508 1.1e-10 71.6 49 67.3
Cre13.g586250 Chlamydomonas reinhardtii HOM05D003866 ORTHO05D004508 5.5e-10 69.3 187 26.7


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