Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0163831 Helianthus annuus HOM05D006871 ORTHO05D008544 7.8e-106 387.1 192 100.0
Lsat_1_v5_gn_8_53460 Lactuca sativa HOM05D006871 ORTHO05D008544 1.1e-96 356.7 192 93.8
ECA236G5112 Erigeron canadensis HOM05D006871 ORTHO05D008544 5.6e-88 327.8 192 86.5
Dinv33046 Davidia involucrata HOM05D006871 ORTHO05D008544 3.9e-81 305.1 190 78.9
CSS0020652 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 8.7e-81 303.9 189 77.2
CSS0035923 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 1.5e-80 303.1 189 77.2
vmacro02459 Vaccinium macrocarpon HOM05D006871 ORTHO05D008544 1.7e-76 289.7 191 74.9
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla HOM05D006871 ORTHO05D008544 4.2e-75 285.0 190 73.7
Actinidia24342 Actinidia chinensis HOM05D006871 ORTHO05D008544 9.3e-75 283.9 190 74.2
Actinidia32224 Actinidia chinensis HOM05D006871 ORTHO05D008544 1.2e-74 283.5 191 74.9
Potri.014G130400 Populus trichocarpa HOM05D006871 ORTHO05D008544 3.5e-74 282.0 191 74.3
MSTRG.18162 Avicennia marina HOM05D006871 ORTHO05D008544 4.6e-74 281.6 189 73.0
PGSC0003DMG400011375 Solanum tuberosum HOM05D006871 ORTHO05D008544 6.0e-74 281.2 197 75.1
Cfa005931 Carpinus fangiana HOM05D006871 ORTHO05D008544 7.9e-74 280.8 196 71.4
SalBow3G3208 Salvia bowleyana HOM05D006871 ORTHO05D008544 7.9e-74 280.8 189 73.0
Thecc.01G298700 Theobroma cacao HOM05D006871 ORTHO05D008544 7.9e-74 280.8 193 71.5
Atru.chr5.1162 Acer truncatum HOM05D006871 ORTHO05D008544 1.0e-73 280.4 189 73.5
PSO210G5360 Papaver somniferum HOM05D006871 ORTHO05D008544 1.8e-73 279.6 190 71.1
PSO832G2873 Papaver somniferum HOM05D006871 ORTHO05D008544 1.8e-73 279.6 190 71.1
Sabra14G0097000 Salix brachista HOM05D006871 ORTHO05D008544 1.8e-73 279.6 191 73.8
Gohir.A08G101400 Gossypium hirsutum HOM05D006871 ORTHO05D008544 2.3e-73 279.3 192 71.9
Oeu032105.1 Olea europaea HOM05D006871 ORTHO05D008544 2.3e-73 279.3 189 72.0
Duzib133G1442 Durio zibethinus HOM05D006871 ORTHO05D008544 3.0e-73 278.9 192 71.4
Lj2A1192T47 Lonicera japonica HOM05D006871 ORTHO05D008544 3.9e-73 278.5 191 74.9
Gohir.D08G084900 Gossypium hirsutum HOM05D006871 ORTHO05D008544 5.1e-73 278.1 192 71.9
Rhsim13G0011300 Rhododendron simsii HOM05D000121 ORTHO05D000102 6.7e-73 277.7 188 73.9
Duzib138G1907 Durio zibethinus HOM05D006871 ORTHO05D008544 8.7e-73 277.3 193 70.5
Cpa.g.sc9.224 Carica papaya HOM05D000121 ORTHO05D000102 1.1e-72 276.9 198 70.2
Solyc09g075030.3 Solanum lycopersicum HOM05D006871 ORTHO05D008544 1.5e-72 276.6 198 73.7
GSVIVG01027991001 Vitis vinifera HOM05D006871 ORTHO05D008544 1.5e-72 276.6 196 69.4
Haze_04913 Corylus avellana HOM05D006871 ORTHO05D008544 1.9e-72 276.2 196 69.9
COL.COLO4_23360 Corchorus olitorius HOM05D006871 ORTHO05D008544 2.5e-72 275.8 186 73.1
Manes.05G063100 Manihot esculenta HOM05D006871 ORTHO05D008544 2.5e-72 275.8 190 71.6
Nitab4.5_0002469g0070 Nicotiana tabacum HOM05D006871 ORTHO05D008544 3.3e-72 275.4 194 73.2
SGA_v2.0_scaffold1G00373 Striga asiatica HOM05D001198 ORTHO05D008544 5.6e-72 274.6 189 72.0
Ciclev10022428m.g Citrus clementina HOM05D006871 ORTHO05D008544 7.4e-72 274.2 188 75.0
TWI14G0013 Tripterygium wilfordii HOM05D006871 ORTHO05D008544 7.4e-72 274.2 189 73.5
AUR62033118 Chenopodium quinoa HOM05D006871 ORTHO05D008544 1.3e-71 273.5 192 67.7
Sopen09g029850 Solanum pennellii HOM05D006871 ORTHO05D008544 1.6e-71 273.1 198 73.2
TAR633G1007 Trochodendron aralioides HOM05D006871 ORTHO05D008544 1.6e-71 273.1 193 70.5
Sc05g0003970 Simmondsia chinensis HOM05D006871 ORTHO05D008544 2.8e-71 272.3 189 71.4
Migut.D00207 Erythranthe guttata HOM05D006871 ORTHO05D008544 4.8e-71 271.6 189 70.9
CiPaw.07G107300 Carya illinoinensis HOM05D006871 ORTHO05D008544 8.2e-71 270.8 192 70.8
PGR119G1195 Punica granatum HOM05D006871 ORTHO05D008544 8.2e-71 270.8 199 66.8
PGR119G1688 Punica granatum HOM05D006871 ORTHO05D008544 8.2e-71 270.8 199 66.8
Peaxi162Scf00001g00482 Petunia axillaris HOM05D006871 ORTHO05D008544 1.1e-70 270.4 190 71.6
unitig_0.g659 Utricularia gibba HOM05D006871 ORTHO05D008544 1.8e-70 269.6 188 69.1
Nitab4.5_0011307g0010 Nicotiana tabacum HOM05D006871 ORTHO05D008544 2.4e-70 269.2 194 71.1
BcaC05g24587 Brassica carinata HOM05D006871 ORTHO05D008544 5.8e-69 264.6 196 67.9
C05p01490 Brassica napus HOM05D006871 ORTHO05D008544 5.8e-69 264.6 196 67.9
BraA10t42428Z Brassica rapa HOM05D006871 ORTHO05D008544 7.6e-69 264.2 196 67.9
EL10Ac7g17459 Beta vulgaris HOM05D006871 ORTHO05D008544 1.0e-68 263.8 192 67.2
BolC5t28931H Brassica oleracea HOM05D006871 ORTHO05D008544 1.7e-68 263.1 196 67.3
A10p01520 Brassica napus HOM05D006871 ORTHO05D008544 2.9e-68 262.3 196 67.3
Thhalv10008837m.g Eutrema salsugineum HOM05D006871 ORTHO05D008544 2.9e-68 262.3 194 68.0
Gorai.004G089300 Gossypium raimondii HOM05D006871 ORTHO05D008544 6.5e-68 261.2 225 61.3
Cc09_g05510 Coffea canephora HOM05D006871 ORTHO05D008544 1.1e-67 260.4 188 68.1
Lalb_Chr18g0047051 Lupinus albus HOM05D006871 ORTHO05D008544 1.9e-67 259.6 191 67.0
Prupe.8G259900 Prunus persica HOM05D006871 ORTHO05D008544 1.9e-67 259.6 192 68.8
Aqoxy5G00741 Aquilegia oxysepala HOM05D006871 ORTHO05D008544 4.2e-67 258.5 189 69.3
CANSAT25G1157 Cannabis sativa HOM05D006871 ORTHO05D008544 4.2e-67 258.5 195 67.2
CANSAT25G3267 Cannabis sativa HOM05D006871 ORTHO05D008544 4.2e-67 258.5 195 67.2
Sp1g01860 Schrenkiella parvula HOM05D006871 ORTHO05D008544 4.2e-67 258.5 194 67.5
CAN.G339.16 Capsicum annuum HOM05D006871 ORTHO05D008544 9.3e-67 257.3 188 73.4
BcaB03g15758 Brassica carinata HOM05D006871 ORTHO05D008544 1.6e-66 256.5 195 67.7
THA.LOC104815930 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 2.7e-66 255.8 194 65.5
CARHR002210 Cardamine hirsuta HOM05D006871 ORTHO05D008544 6.0e-66 254.6 194 66.0
AL1G12280 Arabidopsis lyrata HOM05D006871 ORTHO05D008544 1.0e-65 253.8 194 66.0
THA.LOC104801274 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 1.0e-65 253.8 195 64.1
AT1G02870 Arabidopsis thaliana HOM05D006871 ORTHO05D008544 1.3e-65 253.4 193 66.3
MELO3C016009.2 Cucumis melo HOM05D006871 ORTHO05D008544 1.3e-65 253.4 194 66.0
MD11G1313700 Malus domestica HOM05D006871 ORTHO05D008544 1.3e-65 253.4 194 64.9
RcHm_v2.0_Chr6g0293791 Rosa chinensis HOM05D006871 ORTHO05D008544 1.8e-65 253.1 193 65.8
ClCG09G005940 Citrullus lanatus HOM05D006871 ORTHO05D008544 8.7e-65 250.8 192 64.1
Aa31LG1G9720 Aethionema arabicum HOM05D006871 ORTHO05D008544 2.5e-64 249.2 194 64.9
Hund18131 Selenicereus undatus HOM05D006871 ORTHO05D008544 2.5e-64 249.2 230 56.5
CsaV3_7G029180 Cucumis sativus L. HOM05D006871 ORTHO05D008544 9.7e-64 247.3 192 65.1
QL12p027406 Quercus lobata HOM05D006871 ORTHO05D008544 1.6e-63 246.5 183 69.4
Sed0022553 Sechium edule HOM05D006871 ORTHO05D008544 1.6e-63 246.5 194 63.9
CiPaw.08G096300 Carya illinoinensis HOM05D006871 ORTHO05D008544 3.7e-63 245.4 189 66.7
Carub.0001s0199 Capsella rubella HOM05D006871 ORTHO05D008544 4.8e-63 245.0 194 63.9
Eucgr.H01153 Eucalyptus grandis HOM05D006871 ORTHO05D008544 1.1e-62 243.8 205 62.9
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea HOM05D006871 ORTHO05D008544 2.4e-62 242.7 191 67.0
C08p00260 Brassica napus HOM05D006871 ORTHO05D008544 2.4e-62 242.7 196 65.3
BolC8t46828H Brassica oleracea HOM05D006871 ORTHO05D008544 5.3e-62 241.5 193 65.8
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea HOM05D006871 ORTHO05D008544 1.2e-61 240.4 191 66.0
AUR62008650 Chenopodium quinoa HOM05D006871 ORTHO05D008544 2.0e-61 239.6 275 47.6
FvH4_2g25580 Fragaria vesca HOM05D006871 ORTHO05D008544 5.0e-60 235.0 193 61.1
CDE05G0468 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 1.1e-59 233.8 184 64.1
FAN20G2591 Fragaria x ananassa HOM05D006871 ORTHO05D008544 1.4e-59 233.4 193 60.6
FAN27G2794 Fragaria x ananassa HOM05D006871 ORTHO05D008544 2.5e-59 232.6 193 61.1
Lj1g0003126 Lotus japonicus HOM05D006871 ORTHO05D008544 2.1e-58 229.6 191 62.3
ATR0796G034 Amborella trichopoda HOM05D006871 ORTHO05D008544 6.1e-58 228.0 190 63.2
Zm00001eb285510 Zea mays HOM05D006871 ORTHO05D008544 3.7e-55 218.8 182 61.0
Ca_10345_v3 Cicer arietinum L. HOM05D006871 ORTHO05D008544 1.5e-53 213.4 189 60.8
Os05g0367100 Oryza sativa ssp. japonica HOM05D006871 ORTHO05D008544 2.6e-53 212.6 186 58.6
VMungo0720G2524 Vigna mungo HOM05D006871 ORTHO05D008544 3.4e-53 212.2 190 59.5
Nn3g21461 Nelumbo nucifera HOM05D006871 ORTHO05D008544 4.5e-53 211.8 154 71.4
Phvul.007G143800 Phaseolus vulgaris HOM05D006871 ORTHO05D008544 5.9e-53 211.5 190 59.5
Glyma.10G018900 Glycine max HOM05D006871 ORTHO05D008544 1.0e-52 210.7 188 59.0
FAN24G1547 Fragaria x ananassa HOM05D006871 ORTHO05D008544 1.3e-52 210.3 187 58.3
Glyma.02G155400 Glycine max HOM05D006871 ORTHO05D008544 1.7e-52 209.9 189 58.7
Medtr1g088670 Medicago truncatula HOM05D006871 ORTHO05D008544 1.4e-51 206.8 189 59.3
Psat6g165000 Pisum sativum HOM05D006871 ORTHO05D008544 3.2e-51 205.7 189 59.3
HPP92_013720 Vanilla planifolia HOM05D006871 ORTHO05D008544 9.4e-51 204.1 186 57.5
BcaC07g36990 Brassica carinata HOM05D006871 ORTHO05D008544 3.1e-46 189.1 149 65.1
DCAR_002824 Daucus carota HOM05D006871 ORTHO05D008544 7.7e-37 157.9 112 67.9
Pp3c25_320 Physcomitrium patens HOM05D006871 ORTHO05D008544 1.2e-34 150.6 188 47.3
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis HOM05D006871 ORTHO05D008544 4.0e-33 145.6 182 42.9
MBI19_g13201_MAGBIO Magnolia biondii HOM05D006871 ORTHO05D008544 1.8e-30 136.7 115 62.6
CDE11G0846 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 2.1e-26 123.2 134 52.2
Mapoly0043s0113 Marchantia polymorpha HOM05D006871 ORTHO05D008544 5.2e-25 118.6 182 40.7
Psat1g156280 Pisum sativum HOM05D006871 ORTHO05D008544 9.5e-19 97.8 118 50.8
MD05G1198200 Malus domestica HOM05D006871 ORTHO05D008544 4.0e-17 92.4 54 72.2
Nitab4.5_0000119g0320 Nicotiana tabacum HOM05D006871 ORTHO05D008544 2.8e-15 86.3 46 87.0
CBR_g19096 Chara braunii HOM05D006871 ORTHO05D008544 4.5e-13 79.0 77 50.6
Cre17.g726650 Chlamydomonas reinhardtii HOM05D006871 ORTHO05D008544 1.7e-12 77.0 190 32.1
MCO15G582 Micromonas commoda HOM05D006871 ORTHO05D008544 3.8e-12 75.9 210 31.0
MD03G1286500 Malus domestica HOM05D006871 ORTHO05D008544 1.8e-09 67.0 35 80.0
RcHm_v2.0_Chr2g0134071 Rosa chinensis HOM05D006871 ORTHO05D008544 3.7e-07 59.3 60 53.3


User provided reference genes

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