Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0163721 Helianthus annuus HOM05D004671 ORTHO05D005638 3.9e-54 214.5 107 100.0
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 2.5e-45 185.3 98 96.9
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 1.7e-41 172.6 94 93.6
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 1.7e-41 172.6 94 93.6
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 2.8e-28 128.6 70 94.3
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 2.9e-25 118.6 99 67.7
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 2.7e-23 112.1 96 65.6
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 1.8e-22 109.4 97 64.9
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 1.3e-14 83.2 90 52.2
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 8.7e-14 80.5 91 49.5
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 1.5e-13 79.7 91 48.4
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 1.5e-13 79.7 86 50.0
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 1.5e-13 79.7 86 50.0
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 1.5e-13 79.7 95 48.4
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.3e-12 76.6 91 48.4
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 2.8e-12 75.5 87 52.9
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 8.2e-12 73.9 77 58.4
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 8.2e-12 73.9 79 49.4
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 3.1e-11 72.0 84 47.6
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 5.3e-11 71.2 91 46.2
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 6.9e-11 70.9 95 48.4
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 9.0e-11 70.5 92 46.7
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 9.0e-11 70.5 88 50.0
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.2e-10 70.1 95 48.4
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 2.0e-10 69.3 86 48.8
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 2.6e-10 68.9 92 45.7
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 2.6e-10 68.9 92 50.0
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 3.4e-10 68.6 80 47.5
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 5.8e-10 67.8 75 56.0
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 1.3e-09 66.6 73 47.9
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 1.3e-09 66.6 84 45.2
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 2.2e-09 65.9 78 52.6
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 2.2e-09 65.9 78 52.6
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.8e-09 65.1 106 38.7
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 3.8e-09 65.1 92 41.3
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 4.9e-09 64.7 88 39.8
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 4.9e-09 64.7 80 47.5
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 8.4e-09 63.9 95 45.3
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 8.4e-09 63.9 95 45.3
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 1.4e-08 63.2 86 43.0
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 1.9e-08 62.8 80 52.5
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 4.2e-08 61.6 88 46.6
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 4.2e-08 61.6 89 43.8
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 5.5e-08 61.2 74 48.6
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.2e-07 60.1 71 52.1
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.2e-07 60.1 71 50.7
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 1.6e-07 59.7 90 44.4
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 2.1e-07 59.3 75 50.7
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 2.1e-07 59.3 92 43.5
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 2.7e-07 58.9 92 43.5
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 3.5e-07 58.5 91 45.1
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 4.6e-07 58.2 75 46.7
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 4.6e-07 58.2 89 40.4
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 6.0e-07 57.8 86 45.3
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 6.0e-07 57.8 83 47.0
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 6.0e-07 57.8 83 47.0
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 6.0e-07 57.8 83 47.0
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 6.0e-07 57.8 78 47.4
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 1.0e-06 57.0 84 46.4
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 1.3e-06 56.6 96 42.7
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 1.8e-06 56.2 88 45.5
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 1.8e-06 56.2 71 50.7
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 2.3e-06 55.8 75 49.3
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 5.1e-06 54.7 91 41.8
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 5.1e-06 54.7 87 44.8
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 6.7e-06 54.3 93 37.6
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 6.7e-06 54.3 90 44.4


User provided reference genes

Program Settings