Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 1.5e-77 292.7 148 100.0
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 1.5e-77 292.7 148 100.0
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 5.2e-65 251.1 148 93.2
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 2.9e-60 235.3 150 83.3
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 5.5e-59 231.1 147 85.0
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 1.6e-58 229.6 145 84.1
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 3.6e-58 228.4 145 80.7
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 1.8e-57 226.1 145 83.4
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 3.0e-57 225.3 144 81.9
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 1.2e-56 223.4 144 81.2
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 1.5e-56 223.0 146 80.8
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 1.5e-56 223.0 144 81.9
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 2.6e-56 222.2 144 81.2
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 2.6e-56 222.2 145 81.4
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 2.6e-56 222.2 137 83.2
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 4.4e-56 221.5 148 81.8
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 1.7e-55 219.5 144 79.2
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 1.7e-55 219.5 146 79.5
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 6.3e-55 217.6 146 77.4
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 8.2e-55 217.2 147 79.6
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.1e-54 216.9 146 79.5
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 1.4e-54 216.5 149 78.5
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 1.8e-54 216.1 144 78.5
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 1.8e-54 216.1 145 77.9
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 2.4e-54 215.7 147 78.2
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 5.3e-54 214.5 144 77.1
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 1.2e-53 213.4 145 78.6
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 2.0e-53 212.6 168 73.2
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 2.0e-53 212.6 145 78.6
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 2.7e-53 212.2 147 76.9
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 4.5e-53 211.5 144 77.1
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 7.7e-53 210.7 144 75.0
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 1.3e-52 209.9 146 78.1
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 1.7e-52 209.5 146 76.7
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 2.2e-52 209.1 147 78.9
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 2.2e-52 209.1 145 75.2
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 2.2e-52 209.1 150 74.7
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 2.2e-52 209.1 150 74.7
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 2.2e-52 209.1 150 74.7
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 2.2e-52 209.1 147 76.9
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 2.9e-52 208.8 144 75.0
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 2.9e-52 208.8 147 76.2
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 2.9e-52 208.8 145 76.6
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 3.8e-52 208.4 150 76.0
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 3.8e-52 208.4 148 76.4
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 3.8e-52 208.4 148 75.7
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 5.0e-52 208.0 144 76.4
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 5.0e-52 208.0 147 74.1
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 6.5e-52 207.6 133 79.7
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 6.5e-52 207.6 146 74.7
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 6.5e-52 207.6 146 74.7
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 6.5e-52 207.6 156 69.2
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 6.5e-52 207.6 146 75.3
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 8.5e-52 207.2 144 76.4
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 1.1e-51 206.8 148 76.4
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 1.1e-51 206.8 144 78.5
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 1.1e-51 206.8 147 77.6
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 1.5e-51 206.5 148 73.6
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.5e-51 206.5 144 75.7
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 1.5e-51 206.5 146 76.0
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 1.9e-51 206.1 146 78.1
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 3.2e-51 205.3 147 74.1
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 3.2e-51 205.3 148 73.0
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 3.2e-51 205.3 142 76.8
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 3.2e-51 205.3 142 76.8
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 4.2e-51 204.9 141 73.8
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 5.5e-51 204.5 145 75.2
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 7.2e-51 204.1 130 80.0
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 7.2e-51 204.1 148 73.6
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 7.2e-51 204.1 151 74.2
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 9.4e-51 203.8 135 80.0
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 9.4e-51 203.8 150 75.3
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 9.4e-51 203.8 148 74.3
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 1.2e-50 203.4 147 75.5
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 1.2e-50 203.4 149 72.5
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 1.2e-50 203.4 147 74.8
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 1.6e-50 203.0 137 76.6
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 2.1e-50 202.6 145 75.2
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.1e-50 202.6 145 73.8
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 2.7e-50 202.2 146 74.7
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 2.7e-50 202.2 142 75.4
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 2.7e-50 202.2 114 88.6
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 3.6e-50 201.8 155 71.0
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 3.6e-50 201.8 146 72.6
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 3.6e-50 201.8 141 74.5
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 4.7e-50 201.4 149 75.2
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 4.7e-50 201.4 150 73.3
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 4.7e-50 201.4 147 76.9
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 6.1e-50 201.1 147 73.5
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 8.0e-50 200.7 143 76.9
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 8.0e-50 200.7 148 74.3
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 8.0e-50 200.7 142 74.6
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 1.0e-49 200.3 149 72.5
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 1.0e-49 200.3 111 91.0
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 1.0e-49 200.3 111 91.0
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 1.4e-49 199.9 146 72.6
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 1.4e-49 199.9 147 73.5
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 1.4e-49 199.9 149 74.5
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 1.8e-49 199.5 149 71.1
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 2.3e-49 199.1 149 71.1
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 4.0e-49 198.4 111 90.1
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 6.8e-49 197.6 145 75.9
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 2.6e-48 195.7 148 70.9
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 2.6e-48 195.7 145 69.7
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 3.4e-48 195.3 134 72.4
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 3.4e-48 195.3 144 74.3
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 3.4e-48 195.3 143 74.1
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 5.7e-48 194.5 147 70.1
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 5.7e-48 194.5 114 83.3
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 7.5e-48 194.1 113 85.0
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 9.8e-48 193.7 144 72.2
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 1.7e-47 193.0 172 63.4
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 2.2e-47 192.6 144 70.8
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 2.8e-47 192.2 114 84.2
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 4.8e-47 191.4 111 83.8
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 1.1e-46 190.3 144 72.2
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 3.1e-46 188.7 113 80.5
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 4.1e-46 188.3 118 80.5
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 7.0e-46 187.6 115 81.7
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 3.8e-44 181.8 223 52.5
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 5.5e-43 177.9 175 58.3
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 4.4e-40 168.3 204 50.0
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 5.7e-40 167.9 92 88.0
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 1.3e-39 166.8 90 90.0
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 2.8e-39 165.6 88 90.9
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 1.4e-38 163.3 88 88.6
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 1.6e-37 159.8 111 73.9
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 2.7e-37 159.1 108 76.9
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 8.9e-33 144.1 111 69.4
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 5.4e-30 134.8 122 57.4
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 1.2e-29 133.7 103 71.8
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 6.0e-29 131.3 109 62.4
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 2.5e-27 125.9 113 59.3
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 5.2e-25 118.2 145 51.0
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 1.2e-24 117.1 110 60.0
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 1.5e-24 116.7 63 92.1
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 4.1e-22 108.6 60 88.3
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 5.6e-19 98.2 74 63.5
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 5.6e-19 98.2 86 53.5
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 9.5e-19 97.4 89 58.4
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 5.8e-16 88.2 140 40.7
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 5.4e-14 81.6 113 43.4
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 2.3e-12 76.3 111 37.8
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 3.0e-12 75.9 63 58.7
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 4.7e-10 68.6 48 70.8
RcHm_v2.0_Chr2g0130991 Rosa chinensis HOM05D004802 ORTHO05D005591 2.4e-09 66.2 67 55.2
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 3.1e-09 65.9 35 88.6
BcaC02g11004 Brassica carinata HOM05D004802 ORTHO05D005591 6.4e-07 58.2 86 44.2
Cfa024847 Carpinus fangiana HOM05D004802 ORTHO05D005591 8.4e-07 57.8 80 42.5
PRCOL_00002926 Prasinoderma coloniale HOM05D004802 ORTHO05D005591 8.4e-07 57.8 90 44.4
C04p22280 Brassica napus HOM05D004802 ORTHO05D020149 1.1e-06 57.4 43 67.4
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 5.4e-06 55.1 62 53.2
BolC3t13075H Brassica oleracea HOM05D004802 ORTHO05D005591 7.1e-06 54.7 29 82.8


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