Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0162291 Helianthus annuus HOM05D004527 ORTHO05D005335 5.8e-40 167.2 87 100.0
Gohir.A11G211900 Gossypium hirsutum HOM05D004527 ORTHO05D005335 6.0e-13 77.4 86 53.5
HanXRQChr14g0447741 Helianthus annuus HOM05D004527 ORTHO05D005335 5.3e-09 64.3 65 61.5
AUR62004034 Chenopodium quinoa HOM05D004527 ORTHO05D005335 1.2e-08 63.2 93 46.2
Lsat_1_v5_gn_2_80060 Lactuca sativa HOM05D004527 ORTHO05D005335 2.6e-08 62.0 66 59.1
HanXRQChr11g0323561 Helianthus annuus HOM05D004527 ORTHO05D005335 9.9e-08 60.1 65 56.9
Haze_15019 Corylus avellana HOM05D004527 ORTHO05D005335 2.9e-07 58.5 114 37.7
Lsat_1_v5_gn_3_85800 Lactuca sativa HOM05D004527 ORTHO05D005335 4.9e-07 57.8 65 56.9
Lsat_1_v5_gn_4_158441 Lactuca sativa HOM05D004527 ORTHO05D005335 4.9e-07 57.8 65 53.8
MSTRG.15342 Avicennia marina HOM05D004527 ORTHO05D005335 6.4e-07 57.4 63 54.0
MSTRG.3484 Avicennia marina HOM05D004527 ORTHO05D005335 8.4e-07 57.0 37 78.4
SalBow3G2616 Salvia bowleyana HOM05D004527 ORTHO05D005335 8.4e-07 57.0 63 55.6
CSS0027520 Camellia sinensis var. sinensis HOM05D004527 ORTHO05D005335 1.4e-06 56.2 66 51.5
CSS0031628 Camellia sinensis var. sinensis HOM05D004527 ORTHO05D005335 1.4e-06 56.2 66 51.5
SGA_v2.0_scaffold269G46278 Striga asiatica HOM05D004527 ORTHO05D005335 1.4e-06 56.2 65 52.3
Eucgr.I00670 Eucalyptus grandis HOM05D004527 ORTHO05D005335 1.9e-06 55.8 70 48.6
Peaxi162Scf00096g00187 Petunia axillaris HOM05D004527 ORTHO05D005335 1.9e-06 55.8 65 56.9
Sed0004587 Sechium edule HOM05D004527 ORTHO05D005335 1.9e-06 55.8 37 75.7
ClCG01G017820 Citrullus lanatus HOM05D004527 ORTHO05D005335 2.4e-06 55.5 37 73.0
MELO3C007658.2 Cucumis melo HOM05D004527 ORTHO05D005335 2.4e-06 55.5 37 73.0
CsaV3_6G044360 Cucumis sativus L. HOM05D004527 ORTHO05D005335 2.4e-06 55.5 37 73.0
Migut.L00429 Erythranthe guttata HOM05D004527 ORTHO05D005335 2.4e-06 55.5 63 55.6
Cc07_g07400 Coffea canephora HOM05D004527 ORTHO05D005335 3.2e-06 55.1 63 54.0
FvH4_1g18280 Fragaria vesca HOM05D004527 ORTHO05D005335 4.2e-06 54.7 63 54.0
FAN19G0418 Fragaria x ananassa HOM05D004527 ORTHO05D005335 4.2e-06 54.7 63 54.0
FAN23G2001 Fragaria x ananassa HOM05D004527 ORTHO05D005335 4.2e-06 54.7 63 54.0
RcHm_v2.0_Chr2g0108871 Rosa chinensis HOM05D004527 ORTHO05D005335 4.2e-06 54.7 63 54.0
FAN26G2218 Fragaria x ananassa HOM05D004527 ORTHO05D005335 5.4e-06 54.3 63 52.4
Nitab4.5_0000776g0070 Nicotiana tabacum HOM05D004527 ORTHO05D005335 5.4e-06 54.3 65 56.9
Oeu034346.1 Olea europaea HOM05D004527 ORTHO05D005335 5.4e-06 54.3 63 52.4
Solyc02g092040.1 Solanum lycopersicum HOM05D004527 ORTHO05D005335 5.4e-06 54.3 63 52.4
Sopen02g036620 Solanum pennellii HOM05D004527 ORTHO05D005335 5.4e-06 54.3 63 52.4
MSTRG.2802 Avicennia marina HOM05D004527 ORTHO05D005335 7.1e-06 53.9 63 52.4
Duzib147G0417 Durio zibethinus HOM05D004527 ORTHO05D005335 7.1e-06 53.9 63 52.4
Lalb_Chr16g0379001 Lupinus albus HOM05D004527 ORTHO05D005335 7.1e-06 53.9 66 53.0
Thecc.01G076900 Theobroma cacao HOM05D004527 ORTHO05D005335 7.1e-06 53.9 63 54.0
TAR381G1318 Trochodendron aralioides HOM05D004527 ORTHO05D005335 7.1e-06 53.9 37 73.0
GSVIVG01007390001 Vitis vinifera HOM05D004527 ORTHO05D005335 7.1e-06 53.9 37 70.3
COL.COLO4_11620 Corchorus olitorius HOM05D004527 ORTHO05D005335 9.3e-06 53.5 37 75.7
DCAR_025824 Daucus carota HOM05D004527 ORTHO05D005335 9.3e-06 53.5 37 70.3
Duzib264G0041 Durio zibethinus HOM05D004527 ORTHO05D005335 9.3e-06 53.5 37 75.7
Gohir.A02G149500 Gossypium hirsutum HOM05D004527 ORTHO05D005335 9.3e-06 53.5 63 52.4
Gohir.D03G030300 Gossypium hirsutum HOM05D004527 ORTHO05D005335 9.3e-06 53.5 63 52.4
Gohir.D11G211000 Gossypium hirsutum HOM05D004527 ORTHO05D005335 9.3e-06 53.5 37 75.7
Gohir.D12G077300 Gossypium hirsutum HOM05D004527 ORTHO05D005335 9.3e-06 53.5 63 52.4
Gorai.003G032400 Gossypium raimondii HOM05D004527 ORTHO05D005335 9.3e-06 53.5 63 52.4
Gorai.007G226700 Gossypium raimondii HOM05D004527 ORTHO05D005335 9.3e-06 53.5 37 75.7
Gorai.008G086100 Gossypium raimondii HOM05D004527 ORTHO05D005335 9.3e-06 53.5 63 52.4


User provided reference genes

Program Settings