Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0161191 Helianthus annuus HOM05D000343 ORTHO05D220318 6.8e-50 200.3 97 100.0
HanXRQChr13g0405911 Helianthus annuus HOM05D000343 ORTHO05D000975 3.5e-22 108.2 73 76.7
Lsat_1_v5_gn_1_66140 Lactuca sativa HOM05D000343 ORTHO05D000975 2.8e-19 98.6 73 67.1
ECA248G1604 Erigeron canadensis HOM05D000343 ORTHO05D000975 1.3e-16 89.7 73 63.0
HanXRQChr07g0206351 Helianthus annuus HOM05D000343 ORTHO05D000975 8.7e-13 77.0 73 58.9
ECA233G4619 Erigeron canadensis HOM05D000343 ORTHO05D000975 2.5e-12 75.5 74 56.8
GSVIVG01025299001 Vitis vinifera HOM05D000343 ORTHO05D000975 6.3e-11 70.9 74 54.1
CSS0009029 Camellia sinensis var. sinensis HOM05D000343 ORTHO05D000975 2.4e-10 68.9 74 47.3
CSS0023767 Camellia sinensis var. sinensis HOM05D000343 ORTHO05D000975 2.4e-10 68.9 74 47.3
CiPaw.13G162900 Carya illinoinensis HOM05D000343 ORTHO05D000975 5.3e-10 67.8 74 50.0
DCAR_031554 Daucus carota HOM05D000343 ORTHO05D000975 9.0e-10 67.0 73 47.9
Nitab4.5_0000492g0070 Nicotiana tabacum HOM05D000343 ORTHO05D000975 1.2e-09 66.6 74 48.6
Solyc11g062100.1 Solanum lycopersicum HOM05D000343 ORTHO05D000975 1.2e-09 66.6 74 48.6
Sopen11g024070 Solanum pennellii HOM05D000343 ORTHO05D000975 1.2e-09 66.6 74 48.6
TWI60G0842 Tripterygium wilfordii HOM05D000343 ORTHO05D000975 1.2e-09 66.6 71 50.7
Haze_23105 Corylus avellana HOM05D000343 ORTHO05D000975 1.5e-09 66.2 74 48.6
Haze_23109 Corylus avellana HOM05D000343 ORTHO05D000975 1.5e-09 66.2 74 48.6
Peaxi162Scf00029g02812 Petunia axillaris HOM05D000343 ORTHO05D000975 1.5e-09 66.2 74 47.3
Sabra01G0013500 Salix brachista HOM05D000343 ORTHO05D000975 2.0e-09 65.9 73 46.6
Hund22138 Selenicereus undatus HOM05D000343 ORTHO05D000975 2.0e-09 65.9 74 50.0
EL10Ac4g10294 Beta vulgaris HOM05D000343 ORTHO05D000975 2.6e-09 65.5 107 37.4
PGR119G1454 Punica granatum HOM05D000343 ORTHO05D000975 2.6e-09 65.5 74 47.3
Prupe.4G243400 Prunus persica HOM05D000343 ORTHO05D000975 3.4e-09 65.1 73 49.3
QL01p005178 Quercus lobata HOM05D000343 ORTHO05D000975 3.4e-09 65.1 74 47.3
TWI34G0758 Tripterygium wilfordii HOM05D000343 ORTHO05D000975 3.4e-09 65.1 72 48.6
Ah.04g161880 Amaranthus hybridus HOM05D000343 ORTHO05D000975 4.5e-09 64.7 74 48.6
CAN.G145.3 Capsicum annuum HOM05D000343 ORTHO05D000975 4.5e-09 64.7 74 48.6
Nitab4.5_0002026g0010 Nicotiana tabacum HOM05D000343 ORTHO05D000975 4.5e-09 64.7 71 49.3
MD11G1199600 Malus domestica HOM05D000343 ORTHO05D000975 5.9e-09 64.3 74 50.0
Sc09g0000590 Simmondsia chinensis HOM05D000343 ORTHO05D000975 1.0e-08 63.5 74 45.9
Hma1.2p1_0027F.1_g017130 Hydrangea macrophylla HOM05D000343 ORTHO05D000975 1.3e-08 63.2 73 52.1
Aqoxy2G00121 Aquilegia oxysepala HOM05D000343 ORTHO05D000975 1.7e-08 62.8 74 41.9
Potri.001G019100 Populus trichocarpa HOM05D000343 ORTHO05D000975 2.2e-08 62.4 73 45.2
Gohir.D05G071500 Gossypium hirsutum HOM05D000343 ORTHO05D000975 2.9e-08 62.0 73 45.2
MBI04_g13627_MAGBIO Magnolia biondii HOM05D000343 ORTHO05D000975 2.9e-08 62.0 77 45.5
Manes.14G001600 Manihot esculenta HOM05D000343 ORTHO05D000975 2.9e-08 62.0 74 45.9
RcHm_v2.0_Chr5g0053501 Rosa chinensis HOM05D000343 ORTHO05D000975 2.9e-08 62.0 70 50.0
TAR623G0023 Trochodendron aralioides HOM05D000343 ORTHO05D000975 2.9e-08 62.0 74 45.9
FAN25G2303 Fragaria x ananassa HOM05D000343 ORTHO05D000975 3.8e-08 61.6 73 50.7
Gorai.009G072500 Gossypium raimondii HOM05D000343 ORTHO05D000975 3.8e-08 61.6 73 45.2
FvH4_3g29190 Fragaria vesca HOM05D000343 ORTHO05D000975 5.0e-08 61.2 73 50.7
FAN11G2881 Fragaria x ananassa HOM05D000343 ORTHO05D000975 5.0e-08 61.2 73 50.7
Gohir.A05G068500 Gossypium hirsutum HOM05D000343 ORTHO05D000975 5.0e-08 61.2 73 45.2
Ciclev10014148m.g Citrus clementina HOM05D000343 ORTHO05D000975 1.4e-07 59.7 73 47.9
Actinidia23960 Actinidia chinensis HOM05D000343 ORTHO05D000975 1.9e-07 59.3 74 44.6
Oeu052356.1 Olea europaea HOM05D000343 ORTHO05D000975 2.5e-07 58.9 74 45.9
CANSAT54G0867 Cannabis sativa HOM05D000343 ORTHO05D000975 3.2e-07 58.5 76 42.1
Dinv22192 Davidia involucrata HOM05D000343 ORTHO05D000975 3.2e-07 58.5 71 42.3
Eucgr.J00786 Eucalyptus grandis HOM05D000343 ORTHO05D000975 3.2e-07 58.5 74 41.9
Nn7g36154 Nelumbo nucifera HOM05D000343 ORTHO05D000975 3.2e-07 58.5 74 41.9
SGA_v2.0_scaffold247G44860 Striga asiatica HOM05D000343 ORTHO05D000975 4.2e-07 58.2 74 44.6
Actinidia06329 Actinidia chinensis HOM05D000343 ORTHO05D038165 7.2e-07 57.4 74 44.6
COL.COLO4_24855 Corchorus olitorius HOM05D000343 ORTHO05D000975 7.2e-07 57.4 73 46.6
Thecc.09G229000 Theobroma cacao HOM05D000343 ORTHO05D000975 7.2e-07 57.4 70 45.7
AUR62019275 Chenopodium quinoa HOM05D000343 ORTHO05D000975 9.3e-07 57.0 75 44.0
AUR62019277 Chenopodium quinoa HOM05D000343 ORTHO05D000975 9.3e-07 57.0 75 44.0
Atru.chr3.2607 Acer truncatum HOM05D000343 ORTHO05D000975 1.2e-06 56.6 74 44.6
Actinidia16318 Actinidia chinensis HOM05D000343 ORTHO05D000975 1.2e-06 56.6 54 53.7
vmacro04198 Vaccinium macrocarpon HOM05D000343 ORTHO05D000975 1.2e-06 56.6 74 40.5
Rhsim01G0191000 Rhododendron simsii HOM05D000343 ORTHO05D000975 1.6e-06 56.2 53 54.7
vmacro12715 Vaccinium macrocarpon HOM05D000343 ORTHO05D000975 1.6e-06 56.2 71 43.7
Cc00_g07800 Coffea canephora HOM05D000343 ORTHO05D000975 2.1e-06 55.8 72 47.2
Duzib170G1006 Durio zibethinus HOM05D000343 ORTHO05D000975 2.7e-06 55.5 73 41.1
Lj2A645T22 Lonicera japonica HOM05D000343 ORTHO05D000975 3.6e-06 55.1 74 43.2
Rhsim13G0223200 Rhododendron simsii HOM05D000343 ORTHO05D000975 4.6e-06 54.7 74 41.9
Lj2A636T18 Lonicera japonica HOM05D000343 ORTHO05D000975 6.1e-06 54.3 74 43.2
Migut.D00585 Erythranthe guttata HOM05D000343 ORTHO05D000975 7.9e-06 53.9 74 44.6


User provided reference genes

Program Settings