Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 1.9e-86 322.4 158 100.0
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.9e-86 322.4 158 100.0
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 9.0e-76 287.0 162 90.7
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 9.4e-73 276.9 161 87.6
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 3.3e-70 268.5 157 84.1
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 1.1e-68 263.5 157 85.4
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 5.3e-68 261.2 161 84.5
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.3e-68 261.2 161 82.0
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 9.1e-68 260.4 155 85.8
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 1.2e-67 260.0 155 84.5
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.5e-67 259.6 161 81.4
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 3.4e-67 258.5 160 81.9
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.9e-67 257.7 161 80.1
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 1.7e-66 256.1 161 81.4
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 2.2e-66 255.8 161 80.1
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.9e-66 255.4 157 82.2
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 5.0e-66 254.6 161 81.4
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 5.0e-66 254.6 158 82.9
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 5.0e-66 254.6 160 81.2
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 8.5e-66 253.8 157 81.5
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.4e-65 253.1 161 82.0
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 2.5e-65 252.3 160 82.5
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 4.2e-65 251.5 161 82.0
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 9.4e-65 250.4 158 79.7
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 9.4e-65 250.4 160 80.0
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.2e-64 250.0 156 80.8
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.6e-64 249.6 158 79.1
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 2.7e-64 248.8 157 80.9
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.0e-63 246.9 160 81.2
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 1.4e-63 246.5 158 78.5
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.8e-63 246.1 160 78.1
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 3.9e-63 245.0 145 84.8
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 5.1e-63 244.6 160 78.1
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 5.1e-63 244.6 164 79.9
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 1.1e-62 243.4 157 77.7
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.1e-62 243.4 160 80.0
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.5e-62 243.0 158 78.5
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.5e-62 243.0 158 78.5
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 1.5e-62 243.0 158 80.4
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.0e-62 242.7 159 79.9
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.6e-62 242.3 153 81.7
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 2.6e-62 242.3 159 78.0
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 3.3e-62 241.9 158 77.2
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 5.7e-62 241.1 160 75.6
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 9.7e-62 240.4 159 78.0
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 9.7e-62 240.4 159 78.0
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 9.7e-62 240.4 159 78.0
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 1.3e-61 240.0 161 78.3
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 1.3e-61 240.0 160 75.6
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.3e-61 240.0 160 75.6
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 1.3e-61 240.0 159 78.0
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.7e-61 239.6 152 82.2
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 2.2e-61 239.2 159 76.7
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.2e-61 239.2 157 77.7
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.8e-61 238.8 158 77.2
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 2.8e-61 238.8 161 78.3
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 3.7e-61 238.4 159 76.1
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 3.7e-61 238.4 160 76.9
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 6.3e-61 237.7 159 76.7
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 6.3e-61 237.7 147 79.6
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 8.2e-61 237.3 159 75.5
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 1.1e-60 236.9 159 76.7
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.1e-60 236.9 159 76.1
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 2.4e-60 235.7 161 75.2
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 2.4e-60 235.7 161 74.5
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.4e-60 235.7 160 76.9
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 7.0e-60 234.2 147 78.9
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 7.0e-60 234.2 159 74.8
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 1.2e-59 233.4 161 75.2
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 1.2e-59 233.4 161 72.7
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 1.6e-59 233.0 159 75.5
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 1.6e-59 233.0 160 76.9
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 1.6e-59 233.0 162 76.5
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 6.5e-58 227.6 159 74.8
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.9e-57 226.1 159 73.0
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 9.4e-57 223.8 184 66.3
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 6.1e-56 221.1 149 74.5
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 1.4e-55 219.9 162 73.5
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 1.4e-55 219.9 147 75.5
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 8.8e-55 217.2 161 72.7
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 1.1e-54 216.9 158 74.1
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 4.4e-54 214.9 158 74.1
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.1e-52 210.3 145 73.8
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 4.1e-52 208.4 132 79.5
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 5.3e-52 208.0 158 72.2
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 1.7e-50 203.0 250 51.2
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 4.2e-49 198.4 150 66.7
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 5.5e-49 198.0 158 70.3
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 5.7e-46 188.0 157 68.8
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 2.8e-45 185.7 161 66.5
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 4.5e-43 178.3 157 66.9
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 1.0e-42 177.2 158 67.1
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 1.3e-42 176.8 158 67.1
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 2.2e-42 176.0 158 67.1
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 2.2e-42 176.0 158 67.1
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 2.5e-41 172.6 148 68.2
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 2.1e-40 169.5 117 74.4
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 6.1e-40 167.9 107 80.4
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 2.0e-35 152.9 141 62.4
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 5.9e-35 151.4 142 63.4
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 5.9e-35 151.4 142 63.4
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 7.7e-35 151.0 141 61.7
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 2.3e-34 149.4 142 62.0
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 2.3e-34 149.4 142 62.0
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 5.6e-33 144.8 145 53.1
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 1.4e-28 130.2 79 84.8
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 9.2e-28 127.5 139 48.2
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.2e-27 127.1 137 48.9
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 2.5e-25 119.4 104 62.5
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 2.3e-23 112.8 129 54.3
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 3.7e-21 105.5 79 68.4
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 8.3e-21 104.4 80 66.2
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 8.3e-21 104.4 80 66.2
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 1.4e-20 103.6 57 86.0
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.4e-20 103.6 76 71.1
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.5e-19 99.0 55 87.3
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 6.6e-18 94.7 78 69.2
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 4.3e-17 92.0 51 82.4
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.8e-14 81.6 69 65.2
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 5.8e-14 81.6 67 65.7
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 2.7e-11 72.8 50 70.0


User provided reference genes

Program Settings