Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 4.6e-211 737.6 376 100.0
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 6.1e-171 604.4 378 83.3
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 1.1e-159 567.0 353 81.6
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 5.2e-146 521.5 377 73.2
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 5.4e-143 511.5 378 71.2
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 9.2e-143 510.8 373 71.3
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 3.5e-142 508.8 372 71.0
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 7.8e-142 507.7 372 71.2
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 7.8e-142 507.7 372 71.2
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 1.3e-141 506.9 373 72.1
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 2.9e-141 505.8 364 71.4
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 4.3e-140 501.9 372 69.9
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 7.3e-140 501.1 359 70.8
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 2.1e-139 499.6 309 78.6
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 3.6e-139 498.8 374 69.5
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 1.4e-138 496.9 368 70.9
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 1.4e-138 496.9 363 71.3
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 3.1e-138 495.7 352 72.2
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 5.2e-138 495.0 374 70.3
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 5.2e-138 495.0 362 70.7
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 6.8e-138 494.6 336 72.0
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 6.8e-138 494.6 354 71.8
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 6.8e-138 494.6 362 71.3
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 6.8e-138 494.6 341 73.9
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 8.9e-138 494.2 354 72.3
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 1.2e-137 493.8 369 68.8
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 1.5e-137 493.4 362 70.4
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 1.5e-137 493.4 374 68.4
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 2.0e-137 493.0 377 69.0
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 3.4e-137 492.3 369 68.8
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 5.8e-137 491.5 373 67.6
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 1.3e-136 490.3 375 69.6
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 1.7e-136 490.0 339 72.6
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 2.2e-136 489.6 378 67.5
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 8.3e-136 487.6 376 69.7
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 1.1e-135 487.3 375 68.5
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 2.4e-135 486.1 364 69.5
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 2.4e-135 486.1 342 72.5
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 2.4e-135 486.1 371 68.7
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 2.4e-135 486.1 378 68.3
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 3.2e-135 485.7 372 68.5
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 3.2e-135 485.7 374 67.9
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 4.1e-135 485.3 309 77.0
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 7.0e-135 484.6 374 67.9
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 9.2e-135 484.2 374 68.4
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 1.2e-134 483.8 329 72.9
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 1.2e-134 483.8 374 67.9
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 1.2e-134 483.8 353 69.7
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 2.0e-134 483.0 372 67.7
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 3.5e-134 482.3 378 68.0
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 1.0e-133 480.7 378 66.7
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 1.0e-133 480.7 378 68.5
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 1.3e-133 480.3 372 67.5
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 1.3e-133 480.3 372 67.2
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 2.3e-133 479.6 372 67.5
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 2.3e-133 479.6 376 67.6
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 3.9e-133 478.8 378 68.3
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 6.6e-133 478.0 376 67.6
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 8.6e-133 477.6 310 75.8
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 8.6e-133 477.6 380 65.5
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.1e-132 477.2 392 64.3
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 3.3e-132 475.7 310 75.5
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 4.3e-132 475.3 377 66.3
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 7.3e-132 474.6 360 67.2
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 2.8e-131 472.6 346 70.2
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 2.8e-131 472.6 338 69.5
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 3.6e-131 472.2 409 61.6
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 4.7e-131 471.9 379 64.9
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 8.9e-130 467.6 376 66.5
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 1.2e-129 467.2 341 70.1
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.6e-129 466.1 424 61.6
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 2.9e-128 462.6 379 64.9
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 2.4e-127 459.5 348 68.1
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 7.1e-127 458.0 310 73.5
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 7.1e-127 458.0 386 63.2
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 9.2e-127 457.6 340 67.4
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 7.8e-126 454.5 336 68.5
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 3.0e-125 452.6 280 78.2
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 2.5e-124 449.5 380 64.2
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 4.3e-124 448.7 351 65.0
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 2.1e-123 446.4 295 75.3
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 8.1e-123 444.5 378 61.1
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 3.1e-122 442.6 277 77.6
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 2.0e-121 439.9 336 67.0
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 4.4e-121 438.7 329 64.4
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 1.3e-120 437.2 379 60.9
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.2e-120 436.4 345 65.5
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 4.1e-119 432.2 277 76.2
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 3.9e-109 399.1 463 50.5
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 2.2e-104 383.3 249 75.1
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 1.5e-100 370.5 337 58.8
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.6e-99 367.1 272 66.9
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 6.2e-99 365.2 312 58.0
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 6.7e-93 345.1 278 59.0
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 1.9e-92 343.6 372 50.8
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 1.9e-92 343.6 372 50.8
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.5e-92 343.2 228 73.2
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 7.6e-89 331.6 201 81.6
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 6.5e-88 328.6 230 70.0
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.3e-84 315.8 251 63.3
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.2e-56 223.8 167 65.3
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 8.8e-45 185.3 168 61.9
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 1.2e-41 174.9 176 58.0
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 6.5e-40 169.1 125 72.0
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 8.0e-38 162.2 172 47.1
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 4.3e-31 139.8 153 54.2
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 3.6e-30 136.7 100 67.0
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.3e-27 128.3 85 74.1
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 8.3e-27 125.6 119 48.7
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 2.0e-17 94.4 84 60.7
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.5e-17 93.6 135 43.7
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 1.2e-06 58.5 48 62.5
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 1.2e-06 58.5 48 62.5


User provided reference genes

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