Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 9.2e-173 610.1 310 100.0
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 2.9e-134 482.3 312 78.2
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 2.5e-130 469.2 310 77.1
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.1e-114 417.2 311 67.5
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.1e-114 417.2 311 67.5
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 7.4e-114 414.5 316 66.8
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 2.0e-111 406.4 313 66.5
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 2.9e-110 402.5 311 65.9
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 5.5e-109 398.3 315 65.1
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 1.6e-108 396.7 308 66.6
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 7.9e-108 394.4 304 66.1
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 1.0e-107 394.0 306 64.4
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 1.3e-107 393.7 319 63.9
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 1.8e-107 393.3 314 63.7
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 5.1e-107 391.7 303 67.0
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 6.7e-107 391.3 300 65.7
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 8.7e-107 391.0 307 62.5
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 1.5e-106 390.2 300 66.7
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 1.9e-106 389.8 306 64.7
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.9e-106 389.8 316 63.6
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 1.9e-106 389.8 317 64.4
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 2.5e-106 389.4 313 63.9
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 3.3e-106 389.0 311 65.0
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 4.3e-106 388.7 311 64.0
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 9.7e-106 387.5 319 62.7
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 9.7e-106 387.5 319 62.4
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 2.2e-105 386.3 311 62.1
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 2.2e-105 386.3 305 63.6
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 2.2e-105 386.3 314 63.1
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 2.2e-105 386.3 311 62.1
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 2.2e-105 386.3 314 62.1
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 2.8e-105 386.0 311 64.3
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 1.8e-104 383.3 317 62.5
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 1.8e-104 383.3 313 63.6
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 5.3e-104 381.7 299 63.2
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 6.9e-104 381.3 312 63.5
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 6.9e-104 381.3 312 63.1
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 2.6e-103 379.4 346 59.5
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 1.0e-102 377.5 311 61.1
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 8.5e-102 374.4 306 64.1
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 1.1e-101 374.0 264 71.2
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 1.1e-101 374.0 280 67.9
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 1.4e-101 373.6 339 59.6
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 5.5e-101 371.7 316 61.4
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 5.5e-101 371.7 321 59.8
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 1.2e-100 370.5 311 61.4
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 1.2e-100 370.5 308 63.0
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.2e-100 370.5 307 60.6
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 1.6e-100 370.2 283 64.0
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 2.7e-100 369.4 261 70.9
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 6.1e-100 368.2 262 71.0
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 6.1e-100 368.2 306 60.8
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 6.1e-100 368.2 309 60.5
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 7.9e-100 367.9 262 70.6
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 2.3e-99 366.3 312 62.5
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 3.9e-99 365.5 277 67.1
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 6.7e-99 364.8 311 61.4
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 1.1e-98 364.0 309 60.8
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 1.9e-98 363.2 304 63.5
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 1.9e-98 363.2 261 70.9
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 1.9e-98 363.2 309 61.2
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 3.3e-98 362.5 264 68.9
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 4.3e-98 362.1 315 59.7
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 9.7e-98 360.9 260 69.6
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 1.3e-97 360.5 304 60.2
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 2.2e-97 359.8 300 60.0
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.2e-97 359.8 300 61.0
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.7e-97 359.0 300 61.0
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 3.1e-96 355.9 304 60.5
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 4.1e-96 355.5 257 70.0
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 4.1e-96 355.5 261 69.0
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 5.3e-96 355.1 311 58.8
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 6.9e-96 354.8 306 61.1
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 1.2e-95 354.0 304 60.9
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 1.5e-95 353.6 253 68.0
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 4.5e-95 352.1 304 58.6
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 7.7e-95 351.3 311 59.5
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 3.8e-94 349.0 262 67.6
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 3.8e-94 349.0 262 67.6
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.8e-94 349.0 294 61.6
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 9.4e-93 344.4 306 58.8
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 6.1e-92 341.7 334 55.1
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 6.1e-92 341.7 308 57.5
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 1.0e-91 340.9 295 61.0
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 1.0e-91 340.9 263 65.0
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 5.1e-91 338.6 251 67.3
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 1.1e-90 337.4 303 59.4
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 6.9e-88 328.2 312 54.8
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 9.1e-88 327.8 258 63.6
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 1.2e-87 327.4 275 60.4
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 2.6e-87 326.2 267 61.4
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 8.5e-86 321.2 263 64.6
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 1.1e-85 320.9 312 57.1
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 3.2e-85 319.3 316 54.1
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 3.1e-80 302.8 330 52.4
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 8.5e-78 294.7 232 65.9
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 1.1e-77 294.3 257 59.5
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 2.1e-76 290.0 350 48.0
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 1.2e-74 284.3 264 58.7
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 7.0e-72 275.0 254 59.1
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 9.1e-72 274.6 260 52.3
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 2.0e-71 273.5 380 47.1
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.1e-68 263.5 204 68.1
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 3.0e-67 259.6 190 66.3
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 2.6e-66 256.5 260 52.3
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 8.6e-62 241.5 176 68.2
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 9.5e-61 238.0 165 70.3
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 8.0e-60 235.0 259 49.0
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 2.3e-59 233.4 262 47.3
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 8.9e-59 231.5 164 71.3
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 4.5e-55 219.2 269 42.0
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.2e-51 205.7 146 69.9
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 1.1e-48 198.0 158 63.3
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 1.9e-45 187.2 204 53.9
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 4.9e-33 146.0 277 33.2
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 7.1e-32 142.1 144 51.4
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.5e-29 133.7 153 52.9
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 4.3e-29 132.9 163 49.1
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 7.3e-29 132.1 167 49.1
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 3.6e-28 129.8 119 54.6
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 4.7e-28 129.4 186 43.5
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 4.0e-27 126.3 281 34.2
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 3.8e-25 119.8 210 36.2
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 4.9e-25 119.4 84 66.7
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.9e-22 109.8 95 61.1
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 2.5e-21 107.1 95 57.9
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 3.6e-20 103.2 79 62.0
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 2.6e-18 97.1 66 68.2
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 3.4e-18 96.7 126 45.2
MCO06G261 Micromonas commoda HOM05D005938 ORTHO05D044307 4.6e-07 59.7 150 28.7


User provided reference genes

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