Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 8.2e-96 353.6 165 100.0
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 3.5e-86 321.6 165 87.3
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 3.0e-82 308.5 163 83.4
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 8.8e-82 307.0 165 81.8
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 7.5e-81 303.9 165 80.6
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 1.1e-79 300.1 165 80.6
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 4.1e-79 298.1 163 79.8
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 5.4e-79 297.7 165 77.6
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 7.0e-79 297.4 165 79.4
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 9.1e-79 297.0 165 81.2
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 9.1e-79 297.0 165 81.2
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 9.1e-79 297.0 165 81.8
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 3.5e-78 295.0 162 81.5
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 3.5e-78 295.0 165 77.6
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 3.5e-78 295.0 165 79.4
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 3.5e-78 295.0 163 77.9
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 3.5e-78 295.0 165 78.8
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 1.3e-77 293.1 165 80.6
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 1.7e-77 292.7 165 78.2
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 1.7e-77 292.7 165 79.4
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 2.9e-77 292.0 166 78.3
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.8e-77 291.6 165 79.4
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 3.8e-77 291.6 165 80.0
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 3.8e-77 291.6 165 75.8
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 8.5e-77 290.4 166 78.3
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 1.1e-76 290.0 166 79.5
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 1.1e-76 290.0 165 79.4
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 1.5e-76 289.7 165 76.4
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 1.9e-76 289.3 165 78.8
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 2.5e-76 288.9 165 78.8
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 4.2e-76 288.1 165 77.0
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 4.2e-76 288.1 165 75.2
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 7.2e-76 287.3 165 75.8
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 7.2e-76 287.3 163 76.7
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 1.6e-75 286.2 164 75.6
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 3.6e-75 285.0 163 77.3
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 4.7e-75 284.6 164 79.3
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 4.7e-75 284.6 165 75.8
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 6.1e-75 284.3 165 76.4
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 8.0e-75 283.9 165 75.2
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 8.0e-75 283.9 165 75.2
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 8.0e-75 283.9 163 76.7
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 8.0e-75 283.9 165 75.8
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 8.0e-75 283.9 165 77.6
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 8.0e-75 283.9 161 76.4
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 1.0e-74 283.5 163 76.1
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 1.8e-74 282.7 165 74.5
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 2.3e-74 282.3 163 74.8
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 3.0e-74 282.0 165 74.5
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 4.0e-74 281.6 165 75.8
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 5.2e-74 281.2 165 74.5
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 5.2e-74 281.2 165 75.8
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 6.8e-74 280.8 165 74.5
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 6.8e-74 280.8 165 74.5
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 8.8e-74 280.4 165 74.5
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 1.2e-73 280.0 165 76.4
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 1.5e-73 279.6 165 75.2
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 2.0e-73 279.3 165 75.2
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 2.0e-73 279.3 166 76.5
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 2.6e-73 278.9 165 72.7
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 4.4e-73 278.1 165 73.9
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 9.8e-73 276.9 165 73.9
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 9.8e-73 276.9 165 73.3
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 2.8e-72 275.4 163 74.2
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 3.7e-72 275.0 165 73.9
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 4.9e-72 274.6 165 75.2
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 6.3e-72 274.2 166 74.1
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 8.3e-72 273.9 164 74.4
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 8.3e-72 273.9 165 75.8
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.4e-71 273.1 144 82.6
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 1.8e-71 272.7 165 73.9
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 4.1e-71 271.6 165 73.9
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 9.2e-71 270.4 165 74.5
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 5.9e-70 267.7 165 72.7
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 1.3e-69 266.5 158 74.7
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 3.8e-69 265.0 165 72.1
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 5.6e-68 261.2 165 71.5
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 4.7e-67 258.1 202 59.4
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 1.2e-65 253.4 162 66.7
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 2.4e-63 245.7 165 70.9
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 3.5e-62 241.9 126 87.3
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 4.6e-62 241.5 161 67.1
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 7.8e-62 240.7 164 67.1
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 6.8e-58 227.6 262 45.8
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 2.4e-55 219.2 154 63.6
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 7.8e-54 214.2 141 65.2
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 5.0e-53 211.5 117 78.6
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 1.5e-52 209.9 159 58.5
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 4.7e-51 204.9 113 81.4
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 1.5e-49 199.9 157 56.1
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 7.5e-49 197.6 159 57.9
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 4.6e-46 188.3 164 53.7
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 5.1e-37 158.3 84 83.3
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.9e-36 156.4 91 73.6
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 2.8e-35 152.5 82 81.7
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 1.8e-34 149.8 83 83.1
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 4.0e-34 148.7 91 70.3
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 1.2e-33 147.1 83 77.1
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.7e-32 143.3 82 76.8
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 2.9e-32 142.5 82 74.4
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 9.3e-31 137.5 92 66.3
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 1.2e-30 137.1 82 72.0
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 6.6e-29 131.3 82 69.5
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 2.8e-27 125.9 94 62.8
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 3.4e-17 92.4 69 65.2
COL.COLO4_26703 Corchorus olitorius HOM05D007259 ORTHO05D009158 1.5e-12 77.0 43 76.7
PRCOL_00005528 Prasinoderma coloniale HOM05D007259 ORTHO05D009158 3.8e-08 62.4 89 38.2


User provided reference genes

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