Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0150591 Helianthus annuus HOM05D005689 ORTHO05D007060 7.3e-36 153.3 74 100.0
Eucgr.I01435 Eucalyptus grandis HOM05D005689 ORTHO05D007060 6.7e-13 77.0 46 80.4
Nitab4.5_0003698g0100 Nicotiana tabacum HOM05D005689 ORTHO05D007060 6.7e-13 77.0 51 70.6
Cfa005260 Carpinus fangiana HOM05D005689 ORTHO05D007060 8.7e-13 76.6 46 78.3
FAN15G3340 Fragaria x ananassa HOM05D005689 ORTHO05D007060 8.7e-13 76.6 58 67.2
unitig_0.g36 Utricularia gibba HOM05D005689 ORTHO05D007060 1.9e-12 75.5 51 70.6
Ah.01g023120 Amaranthus hybridus HOM05D005689 ORTHO05D007060 2.5e-12 75.1 45 77.8
MELO3C013345.2 Cucumis melo HOM05D005689 ORTHO05D007060 3.3e-12 74.7 45 77.8
Oeu019918.2 Olea europaea HOM05D005689 ORTHO05D007060 4.3e-12 74.3 52 67.3
BcaNung01978 Brassica carinata HOM05D005689 ORTHO05D007060 5.6e-12 73.9 59 62.7
A06p48990 Brassica napus HOM05D005689 ORTHO05D007060 7.4e-12 73.6 59 62.7
C07p63680 Brassica napus HOM05D005689 ORTHO05D007060 7.4e-12 73.6 59 62.7
BolC7t46781H Brassica oleracea HOM05D005689 ORTHO05D007060 7.4e-12 73.6 59 62.7
BraA06t27765Z Brassica rapa HOM05D005689 ORTHO05D007060 7.4e-12 73.6 59 62.7
CANSAT25G1424 Cannabis sativa HOM05D005689 ORTHO05D007060 7.4e-12 73.6 55 65.5
Thecc.02G057800 Theobroma cacao HOM05D005689 ORTHO05D007060 7.4e-12 73.6 44 77.3
MSTRG.19983 Avicennia marina HOM05D005689 ORTHO05D007060 9.6e-12 73.2 45 75.6
ECA233G5373 Erigeron canadensis HOM05D005689 ORTHO05D007060 9.6e-12 73.2 44 79.5
HanXRQChr03g0080211 Helianthus annuus HOM05D005689 ORTHO05D007060 9.6e-12 73.2 44 79.5
Lsat_1_v5_gn_8_123161 Lactuca sativa HOM05D005689 ORTHO05D007060 9.6e-12 73.2 44 79.5
Lalb_Chr21g0306961 Lupinus albus HOM05D005689 ORTHO05D007060 9.6e-12 73.2 55 63.6
Actinidia20518 Actinidia chinensis HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
arahy.Tifrunner.gnm1.ann1.9U6RFS Arachis hypogaea HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
arahy.Tifrunner.gnm1.ann1.B1HGXN Arachis hypogaea HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
CSS0016500 Camellia sinensis var. sinensis HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Cpa.g.sc20.100 Carica papaya HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
CiPaw.06G120900 Carya illinoinensis HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
CDE02G0259 Ceratophyllum demersum HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 75.0
Ca_08042_v3 Cicer arietinum L. HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
ClCG02G003990 Citrullus lanatus HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Cc09_g09830 Coffea canephora HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
CsaV3_7G001110 Cucumis sativus L. HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Migut.B00070 Erythranthe guttata HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Glyma.09G245600 Glycine max HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Glyma.18G247400 Glycine max HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Lj1g0014054 Lotus japonicus HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Medtr7g081040 Medicago truncatula HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Nitab4.5_0000283g0450 Nicotiana tabacum HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Peaxi162Scf00362g00537 Petunia axillaris HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Phvul.008G049900 Phaseolus vulgaris HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Psat3g100360 Pisum sativum HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Potri.009G136800 Populus trichocarpa HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
QL11p051049 Quercus lobata HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Sabra09G0106300 Salix brachista HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Sed0024195 Sechium edule HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Hund06443 Selenicereus undatus HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Solyc01g111690.3 Solanum lycopersicum HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
Sopen01g053730 Solanum pennellii HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
PGSC0003DMG400006181 Solanum tuberosum HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
TPR.G32114 Trifolium pratense HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
vmacro02282 Vaccinium macrocarpon HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
VMungo1383G2472 Vigna mungo HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
GSVIVG01024004001 Vitis vinifera HOM05D005689 ORTHO05D007060 1.3e-11 72.8 44 77.3
EL10Ac9g21356 Beta vulgaris HOM05D005689 ORTHO05D007060 1.6e-11 72.4 44 75.0
CiPaw.05G083600 Carya illinoinensis HOM05D005689 ORTHO05D007060 1.6e-11 72.4 44 75.0
Dinv41928 Davidia involucrata HOM05D005689 ORTHO05D007060 1.6e-11 72.4 44 75.0
Thhalv10026520m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 1.6e-11 72.4 44 75.0
PGR142G2796 Punica granatum HOM05D005689 ORTHO05D007060 1.6e-11 72.4 44 75.0
SalBow5G2226 Salvia bowleyana HOM05D005689 ORTHO05D007060 1.6e-11 72.4 46 71.7
THA.LOC104824758 Tarenaya hassleriana HOM05D005689 ORTHO05D007060 1.6e-11 72.4 44 75.0
TWI31G0315 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 1.6e-11 72.4 44 75.0
Aqoxy6G02106 Aquilegia oxysepala HOM05D005689 ORTHO05D007060 2.1e-11 72.0 44 75.0
Nn6g31939 Nelumbo nucifera HOM05D005689 ORTHO05D007060 2.1e-11 72.0 44 75.0
Duzib132G1056 Durio zibethinus HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
Duzib248G0128 Durio zibethinus HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
FvH4_2g15500 Fragaria vesca HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
FAN20G0310 Fragaria x ananassa HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
FAN24G0830 Fragaria x ananassa HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
FAN27G1498 Fragaria x ananassa HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
Gohir.A03G205500 Gossypium hirsutum HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
Gohir.D02G226800 Gossypium hirsutum HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
Gorai.005G254700 Gossypium raimondii HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
MD05G1123300 Malus domestica HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
MD10G1126300 Malus domestica HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
PSO541G0653 Papaver somniferum HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 72.7
PSO675G8512 Papaver somniferum HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 72.7
Prupe.8G167200 Prunus persica HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
RcHm_v2.0_Chr6g0278501 Rosa chinensis HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
Sc18g0006380 Simmondsia chinensis HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 75.0
Zm00001eb331790 Zea mays HOM05D005689 ORTHO05D007060 2.8e-11 71.6 44 72.7
Aa31LG6G16620 Aethionema arabicum HOM05D005689 ORTHO05D007060 3.7e-11 71.2 44 72.7
CAN.G588.89 Capsicum annuum HOM05D005689 ORTHO05D007060 3.7e-11 71.2 44 75.0
Ciclev10029529m.g Citrus clementina HOM05D005689 ORTHO05D007060 3.7e-11 71.2 44 75.0
Hma1.2p1_0032F.1_g019300 Hydrangea macrophylla HOM05D005689 ORTHO05D007060 3.7e-11 71.2 44 75.0
Os09g0541500 Oryza sativa ssp. japonica HOM05D005689 ORTHO05D007060 3.7e-11 71.2 44 70.5
Sp7g37220 Schrenkiella parvula HOM05D005689 ORTHO05D007060 3.7e-11 71.2 44 72.7
Atru.chr5.3380 Acer truncatum HOM05D005689 ORTHO05D007060 4.8e-11 70.9 44 75.0
AL4G10060 Arabidopsis lyrata HOM05D005689 ORTHO05D007060 4.8e-11 70.9 44 72.7
Manes.04G071800 Manihot esculenta HOM05D005689 ORTHO05D007060 4.8e-11 70.9 44 75.0
SGA_v2.0_scaffold80G25838 Striga asiatica HOM05D005689 ORTHO05D007060 4.8e-11 70.9 44 75.0
AT2G20930 Arabidopsis thaliana HOM05D005689 ORTHO05D007060 1.1e-10 69.7 44 70.5
Carub.0004s0002 Capsella rubella HOM05D005689 ORTHO05D007060 1.1e-10 69.7 44 70.5
CARHR174210 Cardamine hirsuta HOM05D005689 ORTHO05D007060 1.1e-10 69.7 44 70.5
Sp4g00120 Schrenkiella parvula HOM05D005689 ORTHO05D007060 1.1e-10 69.7 44 70.5
BcaB08g34950 Brassica carinata HOM05D005689 ORTHO05D007060 1.4e-10 69.3 44 68.2
BcaC07g41181 Brassica carinata HOM05D005689 ORTHO05D007060 1.4e-10 69.3 44 68.2
A09p58620 Brassica napus HOM05D005689 ORTHO05D007060 1.4e-10 69.3 44 68.2
C08p41910 Brassica napus HOM05D005689 ORTHO05D007060 1.4e-10 69.3 44 68.2
BolC8t51754H Brassica oleracea HOM05D005689 ORTHO05D007060 1.4e-10 69.3 44 68.2
BraA09t41249Z Brassica rapa HOM05D005689 ORTHO05D007060 1.4e-10 69.3 44 68.2
SalBow1G8746 Salvia bowleyana HOM05D005689 ORTHO05D007060 1.4e-10 69.3 48 66.7
AUR62010026 Chenopodium quinoa HOM05D005689 ORTHO05D007060 1.8e-10 68.9 44 70.5
AUR62013016 Chenopodium quinoa HOM05D005689 ORTHO05D007060 1.8e-10 68.9 44 70.5
DCAR_003179 Daucus carota HOM05D005689 ORTHO05D007060 1.8e-10 68.9 44 70.5
Thhalv10000369m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 1.8e-10 68.9 59 59.3
MBI12_g17551_MAGBIO Magnolia biondii HOM05D005689 ORTHO05D007060 1.8e-10 68.9 44 70.5
Actinidia00628 Actinidia chinensis HOM05D005689 ORTHO05D007060 2.4e-10 68.6 44 72.7
TWI75G0361 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 3.1e-10 68.2 44 70.5
DCAR_030423 Daucus carota HOM05D005689 ORTHO05D007060 5.3e-10 67.4 44 70.5
TAR376G1105 Trochodendron aralioides HOM05D005689 ORTHO05D007060 9.0e-10 66.6 44 68.2
HPP92_012947 Vanilla planifolia HOM05D005689 ORTHO05D007060 1.2e-09 66.2 59 50.8
SEGI_29883 Sequoiadendron giganteum HOM05D005689 ORTHO05D007060 2.0e-09 65.5 48 58.3
Sed0010745 Sechium edule HOM05D005689 ORTHO05D007060 2.6e-09 65.1 44 70.5
Mapoly0010s0009 Marchantia polymorpha HOM05D005689 ORTHO05D007060 4.5e-09 64.3 44 65.9
BcaC07g41184 Brassica carinata HOM05D005689 ORTHO05D007060 8.4e-08 60.1 37 73.0
Pp3c12_10830 Physcomitrium patens HOM05D005689 ORTHO05D007060 5.5e-07 57.4 44 54.5
Nitab4.5_0000079g0270 Nicotiana tabacum HOM05D005689 ORTHO05D007060 7.1e-07 57.0 33 81.8
SMO228G0084 Selaginella moellendorffii HOM05D005689 ORTHO05D007060 7.1e-07 57.0 44 56.8
Pp3c13_19460 Physcomitrium patens HOM05D005689 ORTHO05D007060 9.3e-07 56.6 44 54.5
SalBow5G0288 Salvia bowleyana HOM05D005689 ORTHO05D007060 1.2e-06 56.2 39 66.7
Aa31LG7G15690 Aethionema arabicum HOM05D005689 ORTHO05D007060 1.6e-06 55.8 34 73.5
ATR0315G041 Amborella trichopoda HOM05D005689 ORTHO05D007060 7.9e-06 53.5 33 72.7


User provided reference genes

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