Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 3.3e-92 342.0 217 100.0
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 2.3e-61 239.6 184 66.8
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 8.4e-48 194.5 205 66.8
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 4.2e-47 192.2 176 63.6
Lsat_1_v5_gn_1_2860 Lactuca sativa HOM05D004728 ORTHO05D002375 1.0e-45 187.6 194 61.3
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 7.1e-31 138.3 132 62.9
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.1e-20 104.4 150 38.7
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 1.2e-17 94.4 183 36.6
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 1.5e-17 94.0 137 46.7
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 5.0e-16 89.0 123 38.2
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 8.5e-16 88.2 132 45.5
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.1e-15 87.8 142 34.5
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 7.2e-15 85.1 178 37.1
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.1e-14 83.6 135 47.4
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 4.6e-14 82.4 106 53.8
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 7.9e-14 81.6 132 41.7
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.0e-13 81.3 132 39.4
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 1.0e-13 81.3 183 37.7
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.3e-13 80.1 126 46.0
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.3e-13 80.1 119 37.8
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 5.1e-13 79.0 137 42.3
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 8.8e-13 78.2 132 41.7
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 1.1e-12 77.8 125 35.2
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 1.5e-12 77.4 147 42.9
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 2.6e-12 76.6 133 42.1
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 4.4e-12 75.9 124 41.1
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.4e-12 75.9 124 41.1
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 9.7e-12 74.7 160 34.4
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.3e-11 74.3 147 38.1
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.7e-11 73.9 129 41.1
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 1.7e-11 73.9 177 37.3
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 1.7e-11 73.9 119 41.2
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 2.2e-11 73.6 175 37.7
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 2.2e-11 73.6 121 43.8
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 2.2e-11 73.6 125 40.8
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 2.8e-11 73.2 129 42.6
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.8e-11 73.2 133 45.9
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 2.8e-11 73.2 127 45.7
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 3.7e-11 72.8 127 40.9
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 6.3e-11 72.0 127 42.5
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 8.2e-11 71.6 167 36.5
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.1e-10 71.2 127 38.6
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 1.4e-10 70.9 129 43.4
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.8e-10 70.5 155 38.7
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.8e-10 70.5 123 38.2
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.8e-10 70.5 107 43.9
Lsat_1_v5_gn_1_2800 Lactuca sativa HOM05D037404 ORTHO05D035140 2.4e-10 70.1 105 38.1
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 3.1e-10 69.7 103 33.0
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 3.1e-10 69.7 110 42.7
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 3.1e-10 69.7 99 34.3
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 4.1e-10 69.3 121 30.6
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 4.1e-10 69.3 121 30.6
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 4.1e-10 69.3 98 46.9
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 5.3e-10 68.9 125 38.4
ECA232G1403 Erigeron canadensis HOM05D000469 ORTHO05D000131 5.3e-10 68.9 125 40.8
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 5.3e-10 68.9 104 47.1
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 6.9e-10 68.6 126 38.9
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 9.1e-10 68.2 106 46.2
HanXRQChr17g0556291 Helianthus annuus HOM05D004728 ORTHO05D002375 9.1e-10 68.2 141 30.5
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.5e-09 67.4 106 46.2
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 1.5e-09 67.4 177 35.6
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 2.0e-09 67.0 183 35.0
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 3.4e-09 66.2 188 34.6
Hund23288 Selenicereus undatus HOM05D004728 ORTHO05D002375 3.4e-09 66.2 156 37.2
SalBow3G1954 Salvia bowleyana HOM05D004728 ORTHO05D002375 4.5e-09 65.9 109 43.1
Glyma.02G210100 Glycine max HOM05D012119 ORTHO05D002375 5.9e-09 65.5 130 31.5
FAN26G2532 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.0e-08 64.7 93 46.2
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 1.3e-08 64.3 183 27.9
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 2.2e-08 63.5 125 37.6
arahy.Tifrunner.gnm1.ann1.69RQXC Arachis hypogaea HOM05D012119 ORTHO05D002375 2.9e-08 63.2 152 36.8
Oeu002157.4 Olea europaea HOM05D004728 ORTHO05D002375 2.9e-08 63.2 110 42.7
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 2.9e-08 63.2 94 50.0
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.8e-08 62.8 192 32.3
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 3.8e-08 62.8 124 41.9
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 3.8e-08 62.8 108 42.6
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 5.0e-08 62.4 124 32.3
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 5.0e-08 62.4 106 44.3
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 5.0e-08 62.4 173 34.7
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 5.0e-08 62.4 186 33.3
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 6.5e-08 62.0 116 42.2
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 6.5e-08 62.0 129 40.3
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.5e-08 62.0 192 31.8
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 6.5e-08 62.0 102 33.3
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 8.5e-08 61.6 150 28.7
MELO3C011050.2 Cucumis melo HOM05D039494 ORTHO05D002375 1.1e-07 61.2 161 28.6
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.1e-07 61.2 109 45.0
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 1.1e-07 61.2 127 40.2
Lj4A95G11 Lonicera japonica HOM05D004728 ORTHO05D002375 1.4e-07 60.8 106 48.1
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 1.4e-07 60.8 129 38.0
SGA_v2.0_scaffold48G17928 Striga asiatica HOM05D004728 ORTHO05D002375 1.4e-07 60.8 117 41.0
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 1.4e-07 60.8 136 39.7
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.9e-07 60.5 192 32.3
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 2.5e-07 60.1 102 45.1
Nitab4.5_0002996g0010 Nicotiana tabacum HOM05D019315 ORTHO05D002375 3.2e-07 59.7 191 36.1
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 3.2e-07 59.7 104 45.2
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 4.2e-07 59.3 122 27.0
TAR376G0441 Trochodendron aralioides HOM05D004728 ORTHO05D002375 4.2e-07 59.3 142 37.3
Migut.H02321 Erythranthe guttata HOM05D004728 ORTHO05D002375 7.2e-07 58.5 105 41.9
Lj4C95T1 Lonicera japonica HOM05D004728 ORTHO05D002375 7.2e-07 58.5 42 64.3
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 9.4e-07 58.2 132 39.4
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 9.4e-07 58.2 169 34.9
SGA_v2.0_scaffold115G32157 Striga asiatica HOM05D004728 ORTHO05D002375 9.4e-07 58.2 111 43.2
CANSAT25G2000 Cannabis sativa HOM05D004728 ORTHO05D002375 1.2e-06 57.8 89 48.3
ECA232G3092 Erigeron canadensis HOM05D004728 ORTHO05D045252 1.2e-06 57.8 113 37.2
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 1.6e-06 57.4 104 26.9
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 1.6e-06 57.4 102 43.1
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 2.1e-06 57.0 110 39.1
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 2.7e-06 56.6 184 28.8
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 2.7e-06 56.6 105 41.0
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 2.7e-06 56.6 103 40.8
MD15G1317800 Malus domestica HOM05D004728 ORTHO05D002375 3.6e-06 56.2 109 42.2
PSO541G3905 Papaver somniferum HOM05D015253 ORTHO05D023059 3.6e-06 56.2 89 33.7
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 3.6e-06 56.2 103 42.7
Solyc05g051450.2 Solanum lycopersicum HOM05D019315 ORTHO05D002375 3.6e-06 56.2 97 47.4
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 4.7e-06 55.8 158 36.7
Cc07_g14530 Coffea canephora HOM05D004728 ORTHO05D002375 4.7e-06 55.8 186 30.6
PSO675G1823 Papaver somniferum HOM05D015253 ORTHO05D023059 4.7e-06 55.8 89 34.8
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 6.1e-06 55.5 121 33.1
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 7.9e-06 55.1 188 29.3
Peaxi162Scf00044g01721 Petunia axillaris HOM05D019315 ORTHO05D002375 7.9e-06 55.1 109 44.0


User provided reference genes

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