Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0147931 Helianthus annuus HOM05D019035 ORTHO05D001012 7.9e-73 276.9 134 100.0
Lsat_1_v5_gn_0_7960 Lactuca sativa HOM05D019035 ORTHO05D001012 4.3e-18 95.1 74 59.5
ECA232G3895 Erigeron canadensis HOM05D019035 ORTHO05D001012 8.1e-17 90.9 74 60.8
Lsat_1_v5_gn_0_8000 Lactuca sativa HOM05D019035 ORTHO05D001012 8.1e-17 90.9 73 58.9
Lsat_1_v5_gn_0_7940 Lactuca sativa HOM05D019035 ORTHO05D001012 7.1e-13 77.8 66 57.6
HanXRQChr05g0147921 Helianthus annuus HOM05D019035 ORTHO05D001012 1.2e-12 77.0 72 52.8
Phvul.009G158000 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 1.1e-08 63.9 76 44.7
Nn7g38263 Nelumbo nucifera HOM05D001231 ORTHO05D001012 1.4e-08 63.5 68 42.6
Ca_17033_v3 Cicer arietinum L. HOM05D001231 ORTHO05D001012 3.1e-08 62.4 76 39.5
Nn7g38191 Nelumbo nucifera HOM05D001231 ORTHO05D001012 3.1e-08 62.4 68 42.6
Migut.E00740 Erythranthe guttata HOM05D001231 ORTHO05D001012 4.0e-08 62.0 70 47.1
Hund22171 Selenicereus undatus HOM05D001231 ORTHO05D001012 5.2e-08 61.6 74 37.8
Medtr8g070790 Medicago truncatula HOM05D001231 ORTHO05D001012 6.8e-08 61.2 73 43.8
Phvul.002G278600 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 6.8e-08 61.2 74 44.6
Glyma.05G198000 Glycine max HOM05D001231 ORTHO05D001012 1.2e-07 60.5 74 44.6
Glyma.06G160300 Glycine max HOM05D001231 ORTHO05D001012 1.2e-07 60.5 76 43.4
PGR102G0532 Punica granatum HOM05D001231 ORTHO05D001012 1.2e-07 60.5 74 40.5
CiPaw.04G178400 Carya illinoinensis HOM05D001231 ORTHO05D001012 1.5e-07 60.1 76 38.2
RcHm_v2.0_Chr7g0227171 Rosa chinensis HOM05D001231 ORTHO05D001012 1.5e-07 60.1 76 42.1
Sc20g0000730 Simmondsia chinensis HOM05D001231 ORTHO05D001012 1.5e-07 60.1 66 39.4
ECA233G3610 Erigeron canadensis HOM05D001231 ORTHO05D001012 2.0e-07 59.7 75 41.3
Hund02690 Selenicereus undatus HOM05D001231 ORTHO05D001012 2.0e-07 59.7 68 39.7
Sopen07g001020 Solanum pennellii HOM05D001231 ORTHO05D001012 2.0e-07 59.7 69 40.6
CSS0006682 Camellia sinensis var. sinensis HOM05D001231 ORTHO05D001012 2.6e-07 59.3 74 39.2
CSS0011856 Camellia sinensis var. sinensis HOM05D001231 ORTHO05D001012 2.6e-07 59.3 74 39.2
Manes.18G077618 Manihot esculenta HOM05D001231 ORTHO05D001012 3.4e-07 58.9 69 43.5
Nn7g38190 Nelumbo nucifera HOM05D001231 ORTHO05D001012 3.4e-07 58.9 68 42.6
PGSC0003DMG400015130 Solanum tuberosum HOM05D001231 ORTHO05D001012 3.4e-07 58.9 69 40.6
Psat7g040440 Pisum sativum HOM05D001231 ORTHO05D001012 5.8e-07 58.2 69 43.5
Actinidia39325 Actinidia chinensis HOM05D001231 ORTHO05D001012 7.6e-07 57.8 75 38.7
Medtr3g097420 Medicago truncatula HOM05D001231 ORTHO05D001012 7.6e-07 57.8 76 40.8
Nitab4.5_0007878g0020 Nicotiana tabacum HOM05D001231 ORTHO05D001012 7.6e-07 57.8 76 36.8
PGSC0003DMG400030677 Solanum tuberosum HOM05D001231 ORTHO05D001012 7.6e-07 57.8 68 39.7
Lj4g0025743 Lotus japonicus HOM05D001231 ORTHO05D001012 9.9e-07 57.4 73 43.8
Phvul.003G282500 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 9.9e-07 57.4 73 42.5
CAN.G282.87 Capsicum annuum HOM05D001231 ORTHO05D001012 1.3e-06 57.0 76 36.8
Migut.M01515 Erythranthe guttata HOM05D001231 ORTHO05D001012 1.3e-06 57.0 81 38.3
Peaxi162Scf00088g01111 Petunia axillaris HOM05D001231 ORTHO05D001012 1.3e-06 57.0 69 37.7
PGSC0003DMG400029484 Solanum tuberosum HOM05D001231 ORTHO05D001012 1.3e-06 57.0 77 39.0
Thecc.04G140800 Theobroma cacao HOM05D001231 ORTHO05D001012 1.3e-06 57.0 69 40.6
Medtr8g075980 Medicago truncatula HOM05D001231 ORTHO05D001012 2.9e-06 55.8 71 42.3
Nitab4.5_0009181g0010 Nicotiana tabacum HOM05D001231 ORTHO05D001012 2.9e-06 55.8 69 37.7
Actinidia11098 Actinidia chinensis HOM05D002136 ORTHO05D002145 3.8e-06 55.5 64 45.3
EL10Ac5g10882 Beta vulgaris HOM05D001231 ORTHO05D001012 3.8e-06 55.5 77 36.4
Migut.M01517 Erythranthe guttata HOM05D001231 ORTHO05D001012 3.8e-06 55.5 73 43.8
Lalb_Chr11g0068851 Lupinus albus HOM05D001231 ORTHO05D001012 4.9e-06 55.1 78 39.7
PSO675G5343 Papaver somniferum HOM05D001231 ORTHO05D001012 4.9e-06 55.1 74 40.5
Glyma.08G268000 Glycine max HOM05D001231 ORTHO05D001012 6.4e-06 54.7 66 40.9
Nitab4.5_0000374g0060 Nicotiana tabacum HOM05D001231 ORTHO05D001012 6.4e-06 54.7 69 37.7
Os03g0130300 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 6.4e-06 54.7 70 41.4
TPR.G29340 Trifolium pratense HOM05D001231 ORTHO05D001012 6.4e-06 54.7 81 38.3
CDE04G2371 Ceratophyllum demersum HOM05D001231 ORTHO05D001012 8.4e-06 54.3 76 44.7
Gohir.A05G375500 Gossypium hirsutum HOM05D001231 ORTHO05D001012 8.4e-06 54.3 76 38.2
Nitab4.5_0004431g0020 Nicotiana tabacum HOM05D001231 ORTHO05D001012 8.4e-06 54.3 71 39.4
Peaxi162Scf00025g00313 Petunia axillaris HOM05D001231 ORTHO05D001012 8.4e-06 54.3 77 37.7
Sopen07g001060 Solanum pennellii HOM05D001231 ORTHO05D001012 8.4e-06 54.3 68 36.8


User provided reference genes

Program Settings