Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 2.1e-70 268.9 128 100.0
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 2.4e-63 245.4 119 95.8
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 9.6e-52 206.8 119 76.5
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 2.1e-46 189.1 119 73.9
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 5.9e-33 144.4 119 55.5
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 2.2e-32 142.5 119 52.1
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 3.8e-32 141.7 119 52.9
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 1.9e-31 139.4 119 51.3
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 5.5e-31 137.9 122 47.5
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 7.2e-31 137.5 119 47.1
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 1.2e-30 136.7 120 49.2
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 1.2e-30 136.7 120 50.0
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.7e-30 135.6 122 45.9
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 3.6e-30 135.2 119 47.9
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 4.7e-30 134.8 119 48.7
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 4.7e-30 134.8 114 51.8
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 7.9e-30 134.0 119 47.1
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 7.9e-30 134.0 119 48.7
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 1.0e-29 133.7 119 47.9
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 1.4e-29 133.3 119 47.9
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 3.9e-29 131.7 119 47.1
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 3.9e-29 131.7 119 47.9
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 5.1e-29 131.3 124 45.2
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 6.7e-29 131.0 119 46.2
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 8.8e-29 130.6 119 44.5
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 1.1e-28 130.2 119 47.9
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.5e-28 129.8 119 47.1
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 1.5e-28 129.8 113 51.3
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 2.0e-28 129.4 116 49.1
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 2.0e-28 129.4 119 43.7
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 2.0e-28 129.4 112 49.1
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.6e-28 129.0 113 50.4
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.4e-28 128.3 110 49.1
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 4.4e-28 128.3 119 47.1
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 7.4e-28 127.5 117 47.9
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 7.4e-28 127.5 121 48.8
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 7.4e-28 127.5 121 48.8
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 7.4e-28 127.5 112 52.7
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 9.7e-28 127.1 117 47.9
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 1.3e-27 126.7 116 47.4
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 1.7e-27 126.3 115 48.7
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 3.7e-27 125.2 112 47.3
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 4.8e-27 124.8 119 45.4
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 6.3e-27 124.4 114 46.5
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 6.3e-27 124.4 116 47.4
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 8.2e-27 124.0 119 46.2
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.4e-26 123.2 119 37.8
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 1.8e-26 122.9 114 49.1
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 1.8e-26 122.9 122 50.0
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 1.8e-26 122.9 119 44.5
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 2.4e-26 122.5 120 41.7
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 3.1e-26 122.1 115 45.2
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 3.1e-26 122.1 119 37.8
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 4.1e-26 121.7 119 44.5
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 5.3e-26 121.3 119 44.5
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 7.0e-26 120.9 117 49.6
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 7.0e-26 120.9 117 49.6
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 7.0e-26 120.9 112 46.4
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 7.0e-26 120.9 121 43.0
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 9.1e-26 120.6 119 36.1
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 9.1e-26 120.6 120 46.7
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 9.1e-26 120.6 119 51.3
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 1.2e-25 120.2 115 46.1
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 1.5e-25 119.8 119 40.3
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.5e-25 119.8 112 38.4
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 2.0e-25 119.4 117 43.6
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.0e-25 119.4 112 47.3
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 2.6e-25 119.0 114 42.1
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 3.5e-25 118.6 121 43.0
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 3.5e-25 118.6 114 43.9
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 5.9e-25 117.9 119 43.7
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 5.9e-25 117.9 118 42.4
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 7.7e-25 117.5 119 40.3
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 7.7e-25 117.5 119 40.3
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.0e-24 117.1 115 44.3
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 1.3e-24 116.7 119 42.0
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 1.3e-24 116.7 116 42.2
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 1.3e-24 116.7 121 43.0
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 3.8e-24 115.2 116 45.7
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 5.0e-24 114.8 115 42.6
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 8.5e-24 114.0 112 39.3
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.5e-23 113.2 120 44.2
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 3.2e-23 112.1 112 45.5
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 3.2e-23 112.1 119 44.5
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 3.2e-23 112.1 131 40.5
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 7.2e-23 110.9 112 44.6
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 9.4e-23 110.5 112 43.8
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 1.2e-22 110.2 112 43.8
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 1.4e-21 106.7 118 42.4
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 3.0e-21 105.5 106 41.5
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 4.0e-21 105.1 119 40.3
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 6.7e-21 104.4 125 40.0
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 8.8e-21 104.0 118 40.7
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 1.1e-18 97.1 114 41.2
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 9.1e-18 94.0 112 40.2
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 2.3e-13 79.3 118 37.3
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 9.8e-12 73.9 102 35.3
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 6.3e-11 71.2 116 31.9
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.5e-07 59.3 113 25.7
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 5.5e-07 58.2 91 34.1
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 7.2e-07 57.8 37 59.5


User provided reference genes

Program Settings