Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 0.0e+00 1087.0 672 100.0
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 2.2e-147 526.9 564 58.9
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 3.0e-104 383.6 564 51.1
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 2.0e-71 274.6 569 40.8
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 1.0e-67 262.3 686 36.4
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 8.9e-64 249.2 536 40.7
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 1.5e-63 248.4 595 39.2
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 7.5e-63 246.1 490 41.6
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 3.7e-62 243.8 614 38.6
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 3.0e-59 234.2 613 38.5
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 1.1e-58 232.3 566 36.4
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 2.5e-58 231.1 611 37.5
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 3.3e-58 230.7 485 41.0
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.6e-57 228.4 571 38.0
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 3.6e-57 227.3 595 36.0
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 4.7e-57 226.9 578 36.0
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 4.7e-57 226.9 582 36.8
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 8.1e-57 226.1 522 38.1
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 1.4e-56 225.3 588 37.1
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 1.4e-56 225.3 563 36.6
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 2.3e-56 224.6 591 37.2
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 5.2e-56 223.4 574 36.9
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 8.9e-56 222.6 565 38.1
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 2.6e-55 221.1 577 36.4
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 4.4e-55 220.3 574 38.0
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 7.5e-55 219.5 608 36.5
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 2.2e-54 218.0 521 37.0
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.2e-54 218.0 602 36.7
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 6.4e-54 216.5 594 35.9
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.4e-53 215.3 566 36.2
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 1.9e-53 214.9 546 38.3
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 1.9e-53 214.9 539 38.2
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 4.1e-53 213.8 613 35.6
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 7.1e-53 213.0 539 37.7
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 1.6e-52 211.8 512 37.3
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 2.1e-52 211.5 542 37.3
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 3.5e-52 210.7 597 36.5
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 1.0e-51 209.1 536 38.6
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 2.3e-51 208.0 492 37.6
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 3.0e-51 207.6 615 35.8
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 3.9e-51 207.2 547 37.5
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 5.1e-51 206.8 575 36.2
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 6.6e-51 206.5 577 35.7
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 6.6e-51 206.5 584 34.9
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 1.5e-50 205.3 506 36.8
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 1.9e-50 204.9 522 37.0
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 2.5e-50 204.5 582 36.4
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 3.3e-50 204.1 547 36.6
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 7.3e-50 203.0 629 34.5
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 1.6e-49 201.8 584 36.5
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 2.8e-49 201.1 545 35.6
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 3.6e-49 200.7 594 34.0
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 6.2e-49 199.9 664 34.3
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 8.1e-49 199.5 572 38.1
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 1.1e-48 199.1 332 47.6
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.4e-48 198.7 562 35.4
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 1.8e-48 198.4 603 34.7
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 1.8e-48 198.4 520 36.5
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 4.0e-48 197.2 677 33.7
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 4.0e-48 197.2 467 40.5
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 1.5e-47 195.3 633 34.1
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 1.5e-47 195.3 520 35.8
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 2.0e-47 194.9 552 34.6
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 3.4e-47 194.1 582 34.9
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 3.4e-47 194.1 543 36.6
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 2.2e-46 191.4 516 36.4
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 2.2e-46 191.4 573 36.1
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 2.9e-46 191.0 596 34.4
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 2.9e-46 191.0 635 33.1
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.1e-45 189.1 666 34.1
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 7.1e-45 186.4 563 34.6
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 1.2e-44 185.7 566 35.7
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 1.0e-43 182.6 548 35.9
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 1.7e-43 181.8 539 35.8
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 1.5e-42 178.7 589 34.8
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 1.9e-42 178.3 553 34.7
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.6e-41 175.3 498 36.9
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 2.8e-41 174.5 601 34.4
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 8.1e-41 172.9 536 33.8
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 2.4e-40 171.4 566 33.2
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 1.2e-39 169.1 583 30.5
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 1.2e-39 169.1 502 34.7
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 1.3e-38 165.6 296 45.6
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 2.2e-38 164.9 619 32.5
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 4.6e-36 157.1 567 33.7
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 5.1e-35 153.7 510 33.5
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 9.6e-34 149.4 525 32.2
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 1.1e-32 146.0 524 33.8
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 1.8e-32 145.2 559 31.7
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 4.0e-32 144.1 525 32.0
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 9.0e-32 142.9 524 31.1
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 9.0e-32 142.9 524 31.1
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 9.0e-32 142.9 559 32.6
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 1.2e-31 142.5 723 29.3
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 1.2e-31 142.5 507 32.0
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 1.5e-31 142.1 533 30.8
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 4.5e-31 140.6 517 30.9
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 7.6e-31 139.8 528 30.9
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 9.9e-31 139.4 505 32.9
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 1.3e-30 139.0 492 33.1
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 1.7e-30 138.7 309 40.1
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 1.9e-29 135.2 528 30.5
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 2.4e-29 134.8 505 33.5
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 2.4e-29 134.8 465 33.3
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 4.2e-29 134.0 566 30.0
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 7.1e-29 133.3 546 29.3
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 5.1e-27 127.1 561 30.8
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 6.7e-27 126.7 503 30.6
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 6.7e-27 126.7 516 31.2
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 8.7e-27 126.3 547 30.5
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 4.0e-24 117.5 348 33.0
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 5.3e-24 117.1 484 30.2
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 6.4e-22 110.2 524 30.2
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 1.2e-20 105.9 432 31.7
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 3.7e-17 94.4 359 34.3
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 6.2e-17 93.6 430 30.7
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 8.2e-17 93.2 196 39.3
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 4.0e-16 90.9 362 30.4
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 1.0e-14 86.3 353 31.7
arahy.Tifrunner.gnm1.ann1.UA3HQT Arachis hypogaea HOM05D005926 ORTHO05D007001 3.2e-13 81.3 258 38.0
arahy.Tifrunner.gnm1.ann1.L8M84U Arachis hypogaea HOM05D005926 ORTHO05D007001 1.6e-12 79.0 258 37.6
Os04g0646050 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 3.5e-12 77.8 167 39.5
SEGI_23583 Sequoiadendron giganteum HOM05D005926 ORTHO05D007001 3.5e-12 77.8 374 29.7
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 1.8e-11 75.5 529 27.4
Haze_02594 Corylus avellana HOM05D005926 ORTHO05D007001 7.7e-07 60.1 70 47.1


User provided reference genes

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