Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 2.2e-66 255.8 155 100.0
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 3.8e-50 201.8 162 81.5
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 1.2e-48 196.8 163 79.8
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 1.8e-44 183.0 156 75.6
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 3.4e-43 178.7 162 77.2
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 4.9e-42 174.9 157 73.9
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 8.4e-42 174.1 153 73.2
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.1e-41 173.7 150 74.0
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 1.1e-41 173.7 153 73.9
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.1e-41 173.7 161 71.4
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.4e-41 173.3 153 71.2
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 1.4e-41 173.3 158 74.1
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 1.9e-41 172.9 153 73.2
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 1.9e-41 172.9 154 74.7
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 2.4e-41 172.6 155 74.8
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 3.2e-41 172.2 153 72.5
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 4.2e-41 171.8 153 75.8
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 5.4e-41 171.4 150 74.0
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 7.1e-41 171.0 154 71.4
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 9.3e-41 170.6 154 74.7
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 9.3e-41 170.6 162 74.7
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 1.2e-40 170.2 159 74.2
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 1.6e-40 169.9 154 72.7
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 2.1e-40 169.5 156 73.7
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 2.7e-40 169.1 155 69.7
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 2.7e-40 169.1 155 69.7
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 4.6e-40 168.3 154 72.7
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 6.0e-40 167.9 157 69.4
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 6.0e-40 167.9 155 71.6
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 6.0e-40 167.9 154 72.1
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 7.8e-40 167.5 154 71.4
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 1.0e-39 167.2 154 72.7
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 1.0e-39 167.2 154 72.7
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 2.3e-39 166.0 154 71.4
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 2.3e-39 166.0 157 71.3
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 3.0e-39 165.6 162 69.1
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 3.9e-39 165.2 154 72.1
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 6.6e-39 164.5 155 68.4
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 1.1e-38 163.7 162 73.5
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 1.5e-38 163.3 154 73.4
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 1.5e-38 163.3 168 69.6
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 1.9e-38 162.9 154 72.7
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 2.5e-38 162.5 154 73.4
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 3.3e-38 162.2 167 71.3
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 3.3e-38 162.2 161 70.2
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 3.3e-38 162.2 154 70.8
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 3.3e-38 162.2 150 76.7
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 4.3e-38 161.8 155 71.6
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 9.6e-38 160.6 146 69.2
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 9.6e-38 160.6 146 69.2
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 9.6e-38 160.6 146 69.2
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 9.6e-38 160.6 146 69.2
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.3e-37 160.2 150 72.7
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 1.6e-37 159.8 155 70.3
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.6e-37 159.8 165 69.1
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 1.6e-37 159.8 154 70.8
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 2.8e-37 159.1 148 72.3
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 2.8e-37 159.1 150 74.7
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 3.6e-37 158.7 154 72.1
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 4.8e-37 158.3 157 68.8
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 4.8e-37 158.3 155 70.3
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 6.2e-37 157.9 155 69.7
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 8.1e-37 157.5 150 70.7
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 8.1e-37 157.5 150 70.0
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 8.1e-37 157.5 147 73.5
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 8.1e-37 157.5 111 83.8
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 1.1e-36 157.1 148 70.3
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 1.4e-36 156.8 148 70.3
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.8e-36 156.4 162 66.7
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 4.0e-36 155.2 148 69.6
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 4.0e-36 155.2 148 68.9
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 5.3e-36 154.8 146 71.9
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 9.0e-36 154.1 144 73.6
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 1.5e-35 153.3 150 70.0
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 1.5e-35 153.3 146 73.3
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 3.4e-35 152.1 148 68.9
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 3.4e-35 152.1 155 66.5
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 4.5e-35 151.8 152 67.1
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 9.9e-35 150.6 146 67.1
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 1.3e-34 150.2 143 72.0
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.3e-34 150.2 193 59.6
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 1.7e-34 149.8 151 66.9
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 4.9e-34 148.3 157 66.2
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 6.4e-34 147.9 188 46.8
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 8.4e-34 147.5 155 66.5
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 4.2e-33 145.2 105 82.9
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 5.4e-33 144.8 111 73.9
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.2e-32 143.7 115 80.0
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 1.0e-31 140.6 113 72.6
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 3.0e-31 139.0 155 60.6
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 5.1e-31 138.3 150 62.7
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 6.2e-29 131.3 141 62.4
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 1.3e-26 123.6 168 51.2
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 2.9e-26 122.5 110 69.1
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 1.2e-24 117.1 145 51.0
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 6.7e-23 111.3 150 60.0
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 8.7e-23 110.9 108 59.3
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 1.9e-22 109.8 149 47.7
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 2.5e-22 109.4 101 61.4
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 2.4e-20 102.8 122 53.3
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 4.5e-19 98.6 187 42.8
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 7.6e-19 97.8 90 63.3
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 3.5e-16 89.0 149 42.3
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 5.0e-10 68.6 91 46.2
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 6.5e-10 68.2 60 56.7
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 2.1e-08 63.2 101 50.5
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 2.7e-08 62.8 96 46.9
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 4.6e-08 62.0 96 40.6


User provided reference genes

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