Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.4e-173 612.8 313 100.0
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 5.6e-146 521.2 312 83.3
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 5.7e-138 494.6 301 82.4
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 9.1e-128 460.7 320 71.6
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 3.4e-127 458.8 318 71.1
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.2e-124 450.3 318 69.5
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 8.8e-123 444.1 318 68.9
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 8.8e-123 444.1 318 67.9
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 5.7e-122 441.4 318 67.9
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.3e-121 440.3 316 70.3
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 2.8e-121 439.1 318 67.9
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 4.8e-121 438.3 317 66.6
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 2.4e-120 436.0 318 67.3
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 4.1e-120 435.3 317 67.8
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 7.0e-120 434.5 318 67.3
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.5e-119 433.3 325 67.7
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 1.0e-118 430.6 316 67.7
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 2.2e-118 429.5 318 67.3
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.9e-118 429.1 315 67.6
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 2.9e-118 429.1 316 66.1
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 3.8e-118 428.7 316 67.7
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 5.0e-118 428.3 314 68.2
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.1e-117 427.2 315 67.0
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.1e-117 427.2 314 68.2
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.9e-117 426.4 317 66.2
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 1.9e-117 426.4 318 66.7
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 3.2e-117 425.6 317 66.2
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 4.2e-117 425.2 317 67.5
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 5.5e-117 424.9 315 66.7
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 5.5e-117 424.9 317 67.5
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 5.5e-117 424.9 304 67.4
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 7.2e-117 424.5 317 66.6
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 1.2e-116 423.7 316 64.9
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 2.7e-116 422.5 314 66.6
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 3.6e-116 422.2 314 66.2
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 3.6e-116 422.2 317 66.6
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 4.7e-116 421.8 324 65.7
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 6.1e-116 421.4 316 65.2
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 8.0e-116 421.0 314 66.6
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 1.0e-115 420.6 317 65.0
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.0e-115 420.6 317 64.7
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 1.4e-115 420.2 317 65.6
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 1.4e-115 420.2 318 65.1
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 1.8e-115 419.9 314 66.2
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 2.3e-115 419.5 320 66.2
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 2.3e-115 419.5 316 64.9
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 3.0e-115 419.1 318 64.2
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 3.9e-115 418.7 316 65.2
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 3.9e-115 418.7 316 65.2
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 6.7e-115 417.9 316 65.5
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 6.7e-115 417.9 303 67.3
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.1e-114 417.2 316 64.6
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.5e-114 416.8 318 65.1
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 2.0e-114 416.4 316 65.2
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 2.0e-114 416.4 316 65.2
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 2.0e-114 416.4 318 64.8
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 3.3e-114 415.6 316 64.9
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 4.4e-114 415.2 320 67.2
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 6.3e-113 411.4 297 70.4
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 8.2e-113 411.0 322 63.7
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 9.1e-112 407.5 317 64.0
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 5.9e-111 404.8 309 65.4
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 7.7e-111 404.4 319 63.6
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.0e-110 404.1 360 58.9
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 2.2e-110 402.9 303 65.7
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 2.2e-110 402.9 303 66.0
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 5.0e-110 401.7 318 64.2
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.8e-107 393.3 306 63.7
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 4.0e-107 392.1 338 60.4
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.4e-106 388.7 306 63.1
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.3e-105 387.1 316 65.2
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.2e-105 386.3 270 71.9
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 3.7e-105 385.6 317 63.4
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.8e-105 385.2 307 63.2
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.1e-104 384.0 310 61.9
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 1.8e-104 383.3 317 58.4
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 2.0e-103 379.8 318 59.4
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 6.1e-100 368.2 298 61.7
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 3.0e-99 365.9 317 59.9
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 5.2e-99 365.2 269 66.9
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.7e-95 352.8 306 60.1
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 1.1e-93 347.4 313 57.8
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 2.5e-93 346.3 338 55.3
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 8.0e-92 341.3 247 66.8
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.2e-87 327.4 254 65.0
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 2.7e-87 326.2 323 48.9
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 3.5e-87 325.9 314 55.4
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 7.8e-87 324.7 268 63.1
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 7.8e-87 324.7 268 63.1
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 6.8e-83 311.6 312 49.0
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 6.0e-79 298.5 230 63.5
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 6.0e-79 298.5 256 60.2
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 2.3e-78 296.6 313 48.9
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 3.9e-78 295.8 213 69.0
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.9e-77 293.5 311 48.6
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 6.4e-73 278.5 316 46.8
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 3.0e-70 269.6 302 43.7
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 3.0e-70 269.6 216 62.5
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 4.3e-69 265.8 194 67.5
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 4.9e-65 252.3 181 68.0
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 3.9e-62 242.7 265 48.7
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.8e-59 233.8 230 53.0
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 1.0e-54 218.0 332 41.6
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 9.9e-50 201.4 305 36.4
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 6.0e-47 192.2 145 64.1
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 2.4e-35 153.7 229 41.0
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 5.3e-35 152.5 127 59.8
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 1.3e-33 147.9 126 57.1
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 3.5e-31 139.8 103 63.1
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 2.4e-27 127.1 245 34.7
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.3e-22 111.3 93 61.3
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 4.3e-21 106.3 70 77.1
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 1.4e-19 101.3 88 53.4
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 3.1e-19 100.1 212 32.1
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 2.3e-14 84.0 44 84.1
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 3.0e-06 57.0 72 40.3


User provided reference genes

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