Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0141791 Helianthus annuus HOM05D008488 ORTHO05D000385 1.8e-87 325.9 165 100.0
HanXRQChr09g0254541 Helianthus annuus HOM05D008488 ORTHO05D000385 5.9e-86 320.9 164 98.8
HanXRQChr14g0434671 Helianthus annuus HOM05D008488 ORTHO05D000385 5.9e-70 267.7 135 98.5
ECA096G0001 Erigeron canadensis HOM05D008488 ORTHO05D000385 9.8e-65 250.4 164 79.9
ECA127G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 8.3e-64 247.3 164 78.7
ECA246G0161 Erigeron canadensis HOM05D008488 ORTHO05D000385 7.8e-62 240.7 165 77.6
ECA246G0609 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.8e-59 232.3 140 82.1
ECA233G0549 Erigeron canadensis HOM05D008488 ORTHO05D000385 6.2e-59 231.1 132 86.4
HanXRQChr03g0071501 Helianthus annuus HOM05D008488 ORTHO05D000385 4.4e-57 224.9 112 99.1
ECA246G4823 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.7e-56 221.9 151 76.8
ECA327G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.7e-56 221.9 164 73.2
ECA164G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.9e-40 169.1 100 84.0
ECA234G2194 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.4e-39 164.9 97 84.5
ECA234G0887 Erigeron canadensis HOM05D008488 ORTHO05D000385 7.1e-39 164.5 159 57.2
ECA236G1232 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.1e-34 149.1 168 51.2
HanXRQChr04g0111371 Helianthus annuus HOM05D008488 ORTHO05D000385 1.5e-33 146.7 74 100.0
ECA234G1560 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.6e-33 146.0 107 69.2
ECA234G3995 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.4e-33 145.6 107 70.1
HanXRQChr08g0236751 Helianthus annuus HOM05D008488 ORTHO05D000385 3.4e-33 145.6 89 82.0
ECA247G3403 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.2e-31 139.0 109 66.1
HanXRQChr09g0263931 Helianthus annuus HOM05D008488 ORTHO05D000385 1.3e-29 133.7 74 91.9
ECA233G1871 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.5e-28 129.4 122 60.7
HanXRQChr03g0084621 Helianthus annuus HOM05D008488 ORTHO05D000385 2.8e-19 99.4 50 100.0
HanXRQChr05g0140711 Helianthus annuus HOM05D008488 ORTHO05D000385 1.1e-18 97.4 50 98.0
HanXRQChr09g0254331 Helianthus annuus HOM05D008488 ORTHO05D000385 1.1e-18 97.4 50 98.0
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 6.9e-18 94.7 124 37.1
ECA238G3595 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.5e-17 93.6 113 50.4
ECA238G1683 Erigeron canadensis HOM05D009718 ORTHO05D000385 1.9e-12 76.6 47 72.3
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 3.3e-12 75.9 78 39.7
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 5.6e-12 75.1 78 41.0
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 5.6e-12 75.1 78 41.0
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 5.6e-12 75.1 78 41.0
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 9.6e-12 74.3 121 38.0
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.6e-12 74.3 110 38.2
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-11 73.9 119 38.7
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 4.8e-11 72.0 109 44.0
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.4e-10 70.5 139 32.4
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 1.4e-10 70.5 157 29.3
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.8e-10 70.1 95 37.9
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.8e-10 70.1 95 37.9
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-10 70.1 138 33.3
Dinv04435 Davidia involucrata HOM05D001309 ORTHO05D013539 2.4e-10 69.7 113 37.2
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 2.4e-10 69.7 130 34.6
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.1e-10 69.3 123 33.3
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 3.1e-10 69.3 124 35.5
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 4.0e-10 68.9 136 32.4
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 4.0e-10 68.9 144 34.7
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.3e-10 68.6 95 36.8
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 5.3e-10 68.6 135 34.1
HanXRQChr15g0487911 Helianthus annuus HOM05D008488 ORTHO05D000385 9.0e-10 67.8 37 91.9
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.0e-10 67.8 103 37.9
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 9.0e-10 67.8 103 37.9
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.0e-10 67.8 103 37.9
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.5e-09 67.0 123 32.5
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.0e-09 66.6 103 36.9
TAR624G1439 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.0e-09 66.6 139 31.7
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 3.4e-09 65.9 131 33.6
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.4e-09 65.9 124 35.5
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 3.4e-09 65.9 103 36.9
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 4.5e-09 65.5 128 33.6
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 5.8e-09 65.1 152 29.6
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 7.6e-09 64.7 125 35.2
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.0e-08 64.3 128 33.6
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 1.3e-08 63.9 149 29.5
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 1.3e-08 63.9 114 36.8
TAR625G0459 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.3e-08 63.9 139 31.7
MBI15_g14066_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.7e-08 63.5 140 31.4
TAR633G1163 Trochodendron aralioides HOM05D009698 ORTHO05D000385 1.7e-08 63.5 146 30.8
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.7e-08 63.5 103 35.9
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 2.9e-08 62.8 134 30.6
TAR626G1251 Trochodendron aralioides HOM05D009698 ORTHO05D000385 2.9e-08 62.8 157 29.9
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.8e-08 62.4 95 34.7
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.5e-08 61.6 134 29.9
TAR374G1072 Trochodendron aralioides HOM05D001201 ORTHO05D001100 6.5e-08 61.6 119 31.9
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 8.4e-08 61.2 129 31.0
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 1.1e-07 60.8 143 31.5
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-07 60.8 136 30.9
MBI10_g17725_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-07 60.8 100 39.0
MBI17_g21607_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-07 60.8 147 27.9
TAR472G0003 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-07 60.8 138 33.3
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-07 60.8 96 37.5
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-07 60.5 99 34.3
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-07 60.5 118 31.4
TAR369G0592 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.9e-07 60.1 139 30.2
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 2.5e-07 59.7 103 36.9
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.5e-07 59.7 103 35.9
TAR383G0561 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.5e-07 59.7 107 34.6
TAR383G0938 Trochodendron aralioides HOM05D009698 ORTHO05D000385 2.5e-07 59.7 112 34.8
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.2e-07 59.3 142 35.2
TAR625G0072 Trochodendron aralioides HOM05D009698 ORTHO05D000385 5.5e-07 58.5 90 36.7
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 7.1e-07 58.2 165 28.5
Rhsim11G0067500 Rhododendron simsii HOM05D010774 ORTHO05D013539 7.1e-07 58.2 135 32.6
TAR633G1500 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.1e-07 58.2 127 31.5
MBI02_g14797_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-06 57.4 131 30.5
MBI06_g39196_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-06 57.4 98 34.7
Nitab4.5_0010535g0040 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.6e-06 57.0 106 34.0
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 3.5e-06 55.8 99 33.3
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 3.5e-06 55.8 106 34.0
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 3.5e-06 55.8 121 30.6
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 3.5e-06 55.8 118 30.5
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.5e-06 55.8 140 33.6
Nn4g24072 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.6e-06 55.5 100 39.0
vmacro03942 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 4.6e-06 55.5 55 49.1
CANSAT64G2013 Cannabis sativa HOM05D008488 ORTHO05D000385 6.0e-06 55.1 90 34.4
RcHm_v2.0_Chr6g0306091 Rosa chinensis HOM05D020638 ORTHO05D015199 6.0e-06 55.1 118 29.7
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.9e-06 54.7 88 35.2


User provided reference genes

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