Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0139891 Helianthus annuus HOM05D001733 ORTHO05D001882 2.6e-49 198.4 97 100.0
HanXRQChr04g0117601 Helianthus annuus HOM05D001733 ORTHO05D001882 1.3e-13 79.7 54 75.9
ECA236G4258 Erigeron canadensis HOM05D000200 ORTHO05D000262 7.4e-12 73.9 51 72.5
HanXRQChr16g0501591 Helianthus annuus HOM05D001733 ORTHO05D001882 1.3e-11 73.2 42 85.7
Lsat_1_v5_gn_7_34060 Lactuca sativa HOM05D001733 ORTHO05D001882 4.8e-11 71.2 51 74.5
Cc02_g26570 Coffea canephora HOM05D001733 ORTHO05D001882 4.1e-10 68.2 54 61.1
Peaxi162Scf01260g00014 Petunia axillaris HOM05D001733 ORTHO05D001882 9.0e-10 67.0 54 61.1
PGSC0003DMG401031123 Solanum tuberosum HOM05D001733 ORTHO05D001882 9.0e-10 67.0 54 61.1
Lj7P561T30 Lonicera japonica HOM05D001733 ORTHO05D001882 1.5e-09 66.2 54 61.1
Oeu060721.2 Olea europaea HOM05D001733 ORTHO05D001882 1.5e-09 66.2 54 59.3
Nitab4.5_0007787g0030 Nicotiana tabacum HOM05D001733 ORTHO05D001882 2.0e-09 65.9 54 61.1
Solyc01g081520.3 Solanum lycopersicum HOM05D001733 ORTHO05D001882 2.0e-09 65.9 54 59.3
Sopen01g033080 Solanum pennellii HOM05D001733 ORTHO05D001882 2.0e-09 65.9 54 59.3
Dinv43956 Davidia involucrata HOM05D001733 ORTHO05D001882 2.6e-09 65.5 54 63.0
Nitab4.5_0000792g0200 Nicotiana tabacum HOM05D001733 ORTHO05D001882 2.6e-09 65.5 54 61.1
SGA_v2.0_scaffold98G29368 Striga asiatica HOM05D001733 ORTHO05D001882 3.4e-09 65.1 54 59.3
MSTRG.20625 Avicennia marina HOM05D001733 ORTHO05D001882 4.5e-09 64.7 54 57.4
CAN.G1249.13 Capsicum annuum HOM05D001733 ORTHO05D001882 4.5e-09 64.7 54 59.3
Cc05_g05120 Coffea canephora HOM05D001733 ORTHO05D001882 1.0e-08 63.5 53 58.5
Cc08_g05780 Coffea canephora HOM05D001733 ORTHO05D001882 1.0e-08 63.5 53 58.5
DCAR_029572 Daucus carota HOM05D001733 ORTHO05D001882 1.7e-08 62.8 54 57.4
Migut.B01416 Erythranthe guttata HOM05D001733 ORTHO05D001882 2.2e-08 62.4 54 59.3
Actinidia26430 Actinidia chinensis HOM05D001733 ORTHO05D001882 6.5e-08 60.8 54 57.4
CSS0001376 Camellia sinensis var. sinensis HOM05D001733 ORTHO05D001882 6.5e-08 60.8 54 55.6
CSS0011354 Camellia sinensis var. sinensis HOM05D001733 ORTHO05D001882 6.5e-08 60.8 54 55.6
unitig_0.g1363 Utricularia gibba HOM05D001733 ORTHO05D001882 6.5e-08 60.8 54 53.7
vmacro15942 Vaccinium macrocarpon HOM05D001733 ORTHO05D001882 1.1e-07 60.1 47 66.0
Rhsim07G0048200 Rhododendron simsii HOM05D001733 ORTHO05D001882 1.4e-07 59.7 42 69.0
Hund19368 Selenicereus undatus HOM05D001733 ORTHO05D001882 1.9e-07 59.3 64 50.0
Ah.13g073670 Amaranthus hybridus HOM05D001733 ORTHO05D001882 3.2e-07 58.5 53 56.6
TAR362G0336 Trochodendron aralioides HOM05D001733 ORTHO05D001882 4.2e-07 58.2 54 55.6
TWI73G0070 Tripterygium wilfordii HOM05D001733 ORTHO05D001882 7.2e-07 57.4 54 51.9
AUR62028023 Chenopodium quinoa HOM05D001733 ORTHO05D001882 9.3e-07 57.0 54 53.7
TWI39G0742 Tripterygium wilfordii HOM05D001733 ORTHO05D001882 9.3e-07 57.0 54 50.0
AUR62020701 Chenopodium quinoa HOM05D001733 ORTHO05D001882 1.2e-06 56.6 54 51.9
SalBow5G0061 Salvia bowleyana HOM05D001733 ORTHO05D001882 1.2e-06 56.6 54 50.0
Ciclev10023278m.g Citrus clementina HOM05D001733 ORTHO05D001882 1.6e-06 56.2 54 50.0
Duzib106G0611 Durio zibethinus HOM05D001733 ORTHO05D001882 1.6e-06 56.2 42 64.3
Aa31LG5G14110 Aethionema arabicum HOM05D001733 ORTHO05D001882 2.1e-06 55.8 42 59.5
Manes.08G156000 Manihot esculenta HOM05D001733 ORTHO05D001882 2.1e-06 55.8 42 61.9
Potri.013G070001 Populus trichocarpa HOM05D001733 ORTHO05D001882 2.1e-06 55.8 42 61.9
Aqoxy7G03741 Aquilegia oxysepala HOM05D001733 ORTHO05D001882 3.6e-06 55.1 47 51.1
THA.LOC104820811 Tarenaya hassleriana HOM05D001733 ORTHO05D001882 3.6e-06 55.1 77 39.0
Sabra13G0060700 Salix brachista HOM05D001733 ORTHO05D001882 4.6e-06 54.7 42 59.5
Cfa003706 Carpinus fangiana HOM05D001733 ORTHO05D001882 6.1e-06 54.3 42 61.9
Haze_15782 Corylus avellana HOM05D001733 ORTHO05D001882 6.1e-06 54.3 42 61.9
QL08p048200 Quercus lobata HOM05D001733 ORTHO05D001882 6.1e-06 54.3 54 50.0
AL3G13370 Arabidopsis lyrata HOM05D001733 ORTHO05D001882 7.9e-06 53.9 42 57.1
CANSAT78G1742 Cannabis sativa HOM05D001733 ORTHO05D001882 7.9e-06 53.9 42 61.9
Carub.0003s0276 Capsella rubella HOM05D001733 ORTHO05D001882 7.9e-06 53.9 42 57.1
CARHR077640 Cardamine hirsuta HOM05D001733 ORTHO05D001882 7.9e-06 53.9 42 57.1
CiPaw.02G047900 Carya illinoinensis HOM05D001733 ORTHO05D001882 7.9e-06 53.9 54 50.0
Thhalv10021487m.g Eutrema salsugineum HOM05D001733 ORTHO05D001882 7.9e-06 53.9 42 57.1
Sp3g02590 Schrenkiella parvula HOM05D001733 ORTHO05D001882 7.9e-06 53.9 42 57.1


User provided reference genes

Program Settings