Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 5.5e-283 976.9 461 100.0
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 2.8e-266 921.4 462 93.7
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 4.7e-266 920.6 458 93.4
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 8.4e-247 856.7 462 86.8
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.3e-244 849.4 461 84.6
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.7e-244 849.0 461 85.0
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.6e-244 847.0 462 85.7
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.6e-244 847.0 462 85.7
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 1.5e-243 845.9 461 85.0
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 3.6e-242 841.3 461 83.9
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 4.7e-242 840.9 461 85.0
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 6.2e-242 840.5 461 83.1
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 4.0e-241 837.8 461 83.3
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.0e-241 837.8 462 84.0
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 8.9e-241 836.6 462 83.5
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 8.9e-241 836.6 462 84.8
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 8.9e-241 836.6 462 83.3
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 8.9e-241 836.6 462 83.5
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 8.9e-241 836.6 460 83.7
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.5e-240 835.9 461 83.7
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 2.0e-240 835.5 461 82.9
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.8e-240 833.9 462 83.8
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.3e-239 832.8 461 84.2
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.3e-239 832.8 461 84.4
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 1.7e-239 832.4 461 83.7
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 2.2e-239 832.0 462 83.8
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.9e-239 831.6 461 83.7
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 2.9e-239 831.6 461 83.1
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 8.4e-239 830.1 461 83.7
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.1e-238 829.7 462 82.7
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.1e-238 829.7 462 82.5
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 1.9e-238 828.9 462 83.1
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.9e-238 828.9 476 80.3
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 3.2e-238 828.2 463 83.4
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 3.2e-238 828.2 461 82.9
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.1e-237 825.5 461 82.4
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 3.5e-237 824.7 462 82.9
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 1.0e-236 823.2 461 81.1
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.3e-236 822.8 462 82.0
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.7e-236 822.4 461 80.7
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 2.3e-236 822.0 461 80.7
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 3.0e-236 821.6 462 81.2
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 3.9e-236 821.2 461 80.5
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 3.9e-236 821.2 461 80.5
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 1.3e-234 816.2 462 81.6
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 1.3e-234 816.2 464 79.3
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.6e-234 815.8 461 81.8
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.6e-234 815.8 461 81.8
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 8.1e-234 813.5 461 81.6
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.1e-233 813.1 461 80.3
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.4e-233 812.8 464 80.4
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 6.9e-233 810.4 461 80.9
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 9.0e-233 810.1 461 80.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.2e-232 809.7 461 81.3
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 1.2e-232 809.7 461 81.6
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 2.6e-232 808.5 483 78.5
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 2.9e-231 805.1 461 79.2
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 3.2e-230 801.6 461 78.7
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 3.2e-230 801.6 461 79.0
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.2e-229 799.7 461 78.5
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.6e-229 799.3 461 80.5
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 6.0e-229 797.3 462 79.9
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 4.3e-227 791.2 461 77.9
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 4.3e-227 791.2 462 79.7
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.6e-226 789.3 461 78.1
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 3.6e-226 788.1 456 79.2
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 8.1e-226 786.9 461 79.4
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 5.3e-225 784.3 488 74.4
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 5.8e-224 780.8 466 77.3
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.1e-222 776.5 443 79.7
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 2.1e-221 772.3 461 78.5
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 3.5e-221 771.5 462 78.6
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.8e-220 769.2 462 78.6
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.1e-217 760.0 461 77.4
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.4e-217 758.8 499 72.7
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.2e-216 756.5 460 74.8
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.6e-216 755.4 461 77.2
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 2.2e-215 752.3 461 74.4
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 4.9e-215 751.1 462 76.8
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.3e-207 726.5 463 72.6
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 1.7e-207 726.1 456 73.2
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 6.5e-207 724.2 461 72.9
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 5.5e-198 694.5 499 67.1
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 6.5e-191 671.0 459 69.7
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 8.5e-191 670.6 461 68.8
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 7.0e-185 651.0 393 77.4
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.5e-184 648.3 462 63.2
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.9e-182 642.9 462 63.6
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 1.8e-180 636.3 454 63.4
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 3.3e-179 632.1 340 86.2
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.2e-176 623.6 338 87.3
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.5e-175 617.8 336 86.3
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.2e-174 615.5 456 61.8
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.2e-174 615.1 336 86.0
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.1e-173 612.8 338 86.4
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.0e-172 608.6 337 85.2
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.0e-172 608.6 337 85.2
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 4.4e-171 605.1 464 58.8
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 2.8e-170 602.4 323 88.2
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.1e-169 600.5 337 83.1
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.7e-167 593.2 338 83.4
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 3.4e-163 578.9 337 81.3
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.1e-161 572.4 295 89.8
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 2.5e-158 562.8 464 53.7
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.8e-149 532.7 300 83.7
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.6e-144 516.9 337 74.2
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.0e-144 516.5 291 82.1
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.7e-143 513.5 300 81.3
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 2.9e-138 496.1 277 81.9
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.4e-137 491.9 292 80.5
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 1.3e-130 470.7 338 63.0
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 9.9e-123 444.5 280 74.6
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 4.9e-106 389.0 449 41.4
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 3.0e-95 353.2 484 37.6
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 4.8e-69 266.2 170 71.2
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-56 224.9 110 91.8
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-56 224.9 110 91.8
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-56 224.6 110 91.8
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.9e-50 203.8 185 56.8
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 7.0e-36 156.0 99 78.8
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 2.7e-11 74.3 40 80.0


User provided reference genes

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