Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.4e-198 696.0 354 100.0
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 2.0e-152 542.7 359 79.7
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 4.0e-148 528.5 351 78.3
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 2.1e-133 479.6 372 67.2
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.5e-131 473.4 379 63.9
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 8.7e-127 457.6 363 65.6
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 3.6e-125 452.2 377 64.5
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.2e-123 447.2 369 64.5
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.0e-123 446.4 379 62.5
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 3.4e-123 445.7 381 61.7
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 4.5e-123 445.3 373 64.1
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 7.6e-123 444.5 365 61.9
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 2.2e-122 443.0 367 62.1
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 8.4e-122 441.0 364 63.5
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 7.1e-121 438.0 368 62.2
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 7.1e-121 438.0 369 61.2
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 9.3e-121 437.6 370 61.4
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.7e-120 436.0 366 62.8
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.6e-120 435.3 368 62.2
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 2.3e-119 433.0 354 63.6
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 5.1e-119 431.8 366 60.4
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 1.1e-118 430.6 374 60.7
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 5.6e-118 428.3 368 62.2
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 7.4e-118 427.9 352 63.1
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 9.6e-118 427.6 366 61.7
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 9.6e-118 427.6 352 62.5
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 9.6e-118 427.6 369 60.4
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 2.8e-117 426.0 377 58.9
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 4.8e-117 425.2 367 61.3
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 6.2e-117 424.9 356 62.6
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 6.2e-117 424.9 371 61.5
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 8.1e-117 424.5 356 61.5
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.1e-116 424.1 362 62.4
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 3.1e-116 422.5 367 60.5
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 5.3e-116 421.8 314 66.9
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 6.9e-116 421.4 362 59.9
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 9.0e-116 421.0 377 58.4
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 9.0e-116 421.0 349 62.2
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 2.0e-115 419.9 353 62.3
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 3.4e-115 419.1 352 63.9
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 4.5e-115 418.7 373 60.1
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 5.8e-115 418.3 350 61.4
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 5.8e-115 418.3 363 59.8
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 5.8e-115 418.3 370 60.3
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 7.6e-115 417.9 346 62.7
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 9.9e-115 417.5 363 61.7
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.3e-114 417.2 346 62.4
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.7e-114 416.8 356 61.8
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.2e-114 416.4 352 61.6
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 4.9e-114 415.2 363 60.6
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 4.9e-114 415.2 353 62.3
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 6.4e-114 414.8 350 61.1
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 6.4e-114 414.8 376 59.8
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 6.4e-114 414.8 353 62.3
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 8.4e-114 414.5 390 58.7
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.1e-113 414.1 355 60.8
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.9e-113 413.3 358 59.2
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 3.2e-113 412.5 310 67.4
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 4.2e-113 412.1 401 56.1
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 5.5e-113 411.8 323 63.5
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.2e-112 410.6 371 57.4
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 1.6e-112 410.2 361 59.6
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 2.1e-112 409.8 310 65.5
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 2.1e-112 409.8 371 58.2
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.3e-111 407.1 371 58.8
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 2.3e-111 406.4 363 58.7
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 5.1e-111 405.2 319 63.9
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.5e-110 403.7 344 60.8
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.9e-110 403.3 319 63.6
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 2.5e-110 402.9 426 53.8
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 4.3e-110 402.1 319 63.3
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 3.1e-108 396.0 360 58.3
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 4.5e-107 392.1 361 57.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.0e-106 391.0 374 54.3
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 6.5e-106 388.3 350 58.3
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 8.4e-106 387.9 359 58.8
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 9.3e-105 384.4 337 57.0
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 2.1e-104 383.3 372 57.3
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 6.7e-103 378.3 354 56.2
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 6.7e-103 378.3 379 54.6
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 8.7e-103 377.9 378 56.1
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 8.7e-103 377.9 343 57.7
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.5e-102 377.1 272 70.6
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 5.7e-102 375.2 283 65.7
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 2.8e-101 372.9 264 68.2
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 5.9e-99 365.2 361 56.0
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 4.2e-97 359.0 284 63.0
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.3e-95 353.2 368 54.3
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.7e-93 347.1 401 49.4
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.8e-93 346.3 331 56.2
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 2.8e-93 346.3 365 54.5
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 3.7e-93 345.9 247 71.3
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 4.8e-93 345.5 273 65.6
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.0e-91 340.1 331 55.6
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 3.4e-91 339.3 237 71.7
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 6.7e-87 325.1 304 55.3
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.3e-85 318.5 246 66.7
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.4e-84 316.6 311 55.3
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 3.4e-83 312.8 353 48.4
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 2.2e-82 310.1 268 57.1
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.0e-79 299.7 179 77.7
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 1.1e-76 291.2 322 46.6
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 1.4e-76 290.8 295 52.9
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 5.0e-74 282.3 171 76.6
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 5.2e-71 272.3 328 49.4
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 6.7e-71 271.9 272 54.4
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 3.6e-56 223.0 229 50.7
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 2.9e-50 203.4 198 57.6
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 9.8e-46 188.3 306 38.6
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 6.4e-45 185.7 159 58.5
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.7e-42 177.6 205 47.8
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 3.4e-38 163.3 140 59.3
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 4.9e-37 159.5 175 50.3
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 5.8e-30 136.0 185 43.2
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.5e-25 121.3 71 77.5
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.0e-10 72.0 67 53.7
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.6e-08 64.7 55 56.4
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 4.8e-08 63.2 98 38.8
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.5e-06 58.2 66 56.1


User provided reference genes

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