Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 1.1e-47 193.0 95 100.0
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 9.4e-44 179.9 93 93.5
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 9.4e-44 179.9 93 93.5
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 3.9e-42 174.5 93 91.4
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 8.8e-42 173.3 93 90.3
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 1.5e-41 172.6 93 88.2
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 2.0e-41 172.2 93 89.2
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 2.0e-41 172.2 93 89.2
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 2.6e-41 171.8 93 89.2
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 2.6e-41 171.8 93 89.2
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 2.6e-41 171.8 93 89.2
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 3.3e-41 171.4 93 88.2
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 4.4e-41 171.0 95 87.4
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.4e-41 171.0 95 87.4
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.4e-41 171.0 95 87.4
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.4e-41 171.0 95 87.4
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.4e-41 171.0 95 87.4
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 4.4e-41 171.0 93 89.2
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 4.4e-41 171.0 93 89.2
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 5.7e-41 170.6 93 88.2
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 5.7e-41 170.6 93 88.2
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 5.7e-41 170.6 93 88.2
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 5.7e-41 170.6 93 88.2
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 7.4e-41 170.2 93 88.2
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 7.4e-41 170.2 93 84.9
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 1.7e-40 169.1 93 87.1
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 2.8e-40 168.3 93 86.0
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 2.8e-40 168.3 93 86.0
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 4.8e-40 167.5 93 87.1
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 4.8e-40 167.5 93 87.1
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 4.8e-40 167.5 93 86.0
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 6.3e-40 167.2 93 86.0
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 6.3e-40 167.2 93 86.0
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 6.3e-40 167.2 93 86.0
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 8.2e-40 166.8 93 84.9
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 8.2e-40 166.8 93 86.0
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 8.2e-40 166.8 93 86.0
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 1.1e-39 166.4 93 86.0
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 1.1e-39 166.4 93 84.9
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 1.1e-39 166.4 93 84.9
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 1.4e-39 166.0 94 84.0
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 1.4e-39 166.0 93 84.9
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 1.8e-39 165.6 93 84.9
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 1.8e-39 165.6 93 83.9
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 2.4e-39 165.2 93 83.9
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 2.4e-39 165.2 93 86.0
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 2.4e-39 165.2 93 84.9
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 2.4e-39 165.2 93 84.9
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 3.1e-39 164.9 93 83.9
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 3.1e-39 164.9 93 81.7
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 3.1e-39 164.9 93 81.7
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 3.1e-39 164.9 93 81.7
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 3.1e-39 164.9 93 86.0
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 4.1e-39 164.5 93 83.9
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 4.1e-39 164.5 93 83.9
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 5.3e-39 164.1 93 84.9
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 5.3e-39 164.1 93 84.9
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 9.1e-39 163.3 93 83.9
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 2.6e-38 161.8 93 80.6
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 4.5e-38 161.0 93 80.6
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 4.5e-38 161.0 93 82.8
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 4.5e-38 161.0 93 80.6
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 4.5e-38 161.0 93 80.6
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 4.5e-38 161.0 93 80.6
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 5.9e-38 160.6 93 82.8
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 5.9e-38 160.6 93 83.9
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 7.7e-38 160.2 93 81.7
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 7.7e-38 160.2 93 81.7
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 1.0e-37 159.8 93 81.7
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 1.0e-37 159.8 93 82.8
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 1.0e-37 159.8 93 82.8
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 1.7e-37 159.1 94 84.0
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 1.7e-37 159.1 93 81.7
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 2.2e-37 158.7 93 80.6
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 2.9e-37 158.3 93 81.7
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 3.8e-37 157.9 93 81.7
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 5.0e-37 157.5 93 78.5
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 1.9e-36 155.6 94 81.9
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 1.9e-36 155.6 93 80.6
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 2.5e-36 155.2 93 78.5
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 4.2e-36 154.5 93 78.5
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 4.2e-36 154.5 94 80.9
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 5.5e-36 154.1 93 79.6
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 7.2e-36 153.7 95 80.0
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 9.4e-36 153.3 93 77.4
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 9.4e-36 153.3 93 80.6
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 9.4e-36 153.3 93 80.6
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 1.6e-35 152.5 87 85.1
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 1.6e-35 152.5 93 80.6
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 1.6e-35 152.5 93 81.7
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 1.6e-35 152.5 94 80.9
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 2.1e-35 152.1 93 78.5
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 2.7e-35 151.8 93 78.5
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 2.7e-35 151.8 116 68.1
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 3.6e-35 151.4 93 79.6
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 3.6e-35 151.4 93 79.6
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 4.7e-35 151.0 93 79.6
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 4.7e-35 151.0 93 79.6
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 4.7e-35 151.0 93 78.5
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 6.1e-35 150.6 93 77.4
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 6.1e-35 150.6 93 78.5
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 7.9e-35 150.2 91 76.9
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.0e-34 149.8 93 78.5
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 1.0e-34 149.8 93 79.6
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 1.4e-34 149.4 93 78.5
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 1.4e-34 149.4 93 79.6
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 1.8e-34 149.1 93 76.3
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 1.8e-34 149.1 93 78.5
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 1.8e-34 149.1 93 78.5
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 2.3e-34 148.7 93 77.4
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 3.0e-34 148.3 93 78.5
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 3.0e-34 148.3 93 76.3
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 5.2e-34 147.5 93 75.3
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 5.2e-34 147.5 93 76.3
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 6.7e-34 147.1 93 76.3
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 6.7e-34 147.1 93 76.3
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 6.7e-34 147.1 93 76.3
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 6.7e-34 147.1 94 74.5
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 6.7e-34 147.1 94 74.5
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 8.8e-34 146.7 93 75.3
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 2.6e-33 145.2 93 75.3
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 3.3e-33 144.8 93 74.2
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 4.4e-33 144.4 93 74.2
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 4.4e-33 144.4 93 75.3
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 4.4e-33 144.4 93 74.2
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 4.4e-33 144.4 93 74.2
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 4.4e-33 144.4 93 74.2
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 4.4e-33 144.4 93 75.3
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 4.4e-33 144.4 93 74.2
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 4.4e-33 144.4 86 80.2
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 5.7e-33 144.1 94 73.4
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 7.4e-33 143.7 93 74.2
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 1.3e-32 142.9 93 74.2
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 1.7e-32 142.5 86 76.7
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 1.7e-32 142.5 94 72.3
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 1.7e-32 142.5 93 71.0
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 2.2e-32 142.1 81 82.7
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 6.3e-32 140.6 149 53.0
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 8.2e-32 140.2 94 72.3
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 8.2e-32 140.2 94 72.3
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 1.1e-31 139.8 81 80.2
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 1.8e-31 139.0 86 74.4
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 4.1e-31 137.9 94 71.3
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 1.6e-30 136.0 93 67.7
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 3.5e-30 134.8 95 65.3
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 3.5e-30 134.8 81 79.0
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 4.5e-30 134.4 94 66.0
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 1.3e-29 132.9 75 88.0
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 1.3e-29 132.9 91 69.2
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 1.3e-29 132.9 91 69.2
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 1.3e-29 132.9 86 73.3
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 2.2e-29 132.1 91 69.2
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 2.9e-29 131.7 93 65.6
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 6.5e-29 130.6 91 68.1
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 6.5e-29 130.6 158 48.1
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 7.2e-28 127.1 90 67.8
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 4.7e-27 124.4 86 69.8
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 4.7e-27 124.4 94 59.6
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 6.1e-27 124.0 93 65.6
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 6.1e-27 124.0 68 85.3
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 8.0e-27 123.6 62 93.5
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 4.0e-26 121.3 61 93.4
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 4.0e-26 121.3 94 56.4
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 5.2e-26 120.9 62 90.3
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 5.2e-26 120.9 87 66.7
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 1.2e-25 119.8 76 76.3
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.3e-25 118.2 92 63.0
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 5.7e-25 117.5 62 87.1
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 9.7e-25 116.7 92 58.7
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 2.8e-24 115.2 93 62.4
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 3.7e-24 114.8 93 66.7
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 1.7e-21 105.9 84 63.1
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 5.0e-21 104.4 94 60.6
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 6.5e-21 104.0 67 73.1
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 7.2e-20 100.5 90 56.7
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 7.2e-20 100.5 90 56.7
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 2.0e-17 92.4 79 54.4
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 5.4e-15 84.3 94 44.7
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 1.2e-14 83.2 79 48.1
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 7.7e-14 80.5 80 48.8
SHI25717 Sapria himalayana HOM05D003862 ORTHO05D004398 4.5e-06 54.7 61 47.5


User provided reference genes

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