Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0134551 Helianthus annuus HOM05D006569 ORTHO05D007515 9.8e-101 370.9 326 100.0
HanXRQChr07g0199321 Helianthus annuus HOM05D006569 ORTHO05D007515 1.3e-89 334.0 315 96.2
ECA238G4289 Erigeron canadensis HOM05D006569 ORTHO05D007515 6.7e-57 225.3 315 67.0
Lsat_1_v5_gn_2_89461 Lactuca sativa HOM05D006569 ORTHO05D007515 4.9e-52 209.1 306 63.1
Oeu010220.1 Olea europaea HOM05D006569 ORTHO05D007515 1.9e-35 154.1 305 67.9
CANSAT64G0455 Cannabis sativa HOM05D006569 ORTHO05D007515 1.6e-34 151.0 306 41.8
TAR371G0591 Trochodendron aralioides HOM05D006569 ORTHO05D007515 3.9e-33 146.4 315 58.7
MD09G1053400 Malus domestica HOM05D006569 ORTHO05D007515 2.0e-32 144.1 306 62.7
QL08p010038 Quercus lobata HOM05D006569 ORTHO05D007515 5.7e-32 142.5 310 32.3
Ciclev10013587m.g Citrus clementina HOM05D006569 ORTHO05D007515 2.2e-31 140.6 305 48.9
QL02p053824 Quercus lobata HOM05D006569 ORTHO05D007515 2.8e-31 140.2 299 60.5
Glyma.18G093100 Glycine max HOM05D006569 ORTHO05D007515 4.5e-29 132.9 305 50.8
EL10Ac2g03001 Beta vulgaris HOM05D006569 ORTHO05D007515 5.9e-29 132.5 306 50.7
AUR62018101 Chenopodium quinoa HOM05D006569 ORTHO05D007515 1.7e-28 131.0 295 53.2
Glyma.18G108202 Glycine max HOM05D006569 ORTHO05D007515 8.5e-28 128.6 305 48.2
FAN14G1478 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.4e-27 127.9 305 63.6
FAN05G0252 Fragaria x ananassa HOM05D006569 ORTHO05D007515 3.2e-27 126.7 305 35.1
VMungo0540G0528 Vigna mungo HOM05D006569 ORTHO05D007515 3.2e-27 126.7 305 64.3
FvH4_6g48150 Fragaria vesca HOM05D006569 ORTHO05D007515 4.2e-27 126.3 305 63.6
Phvul.006G046500 Phaseolus vulgaris HOM05D006569 ORTHO05D007515 4.2e-27 126.3 305 52.5
FAN09G2200 Fragaria x ananassa HOM05D006569 ORTHO05D007515 2.7e-26 123.6 305 47.9
FAN02G1154 Fragaria x ananassa HOM05D006569 ORTHO05D007515 4.7e-26 122.9 305 63.9
Ca_14754_v3 Cicer arietinum L. HOM05D006569 ORTHO05D007515 8.0e-26 122.1 308 48.1
CiPaw.04G004700 Carya illinoinensis HOM05D006569 ORTHO05D007515 1.8e-25 120.9 305 67.5
Migut.K01310 Erythranthe guttata HOM05D006569 ORTHO05D007515 3.0e-25 120.2 315 26.7
MELO3C023650.2 Cucumis melo HOM05D006569 ORTHO05D007515 1.1e-24 118.2 304 52.6
TPR.G33795 Trifolium pratense HOM05D006569 ORTHO05D007515 1.1e-24 118.2 302 48.3
Psat5g175080 Pisum sativum HOM05D006569 ORTHO05D007515 2.0e-24 117.5 307 56.0
CSS0028247 Camellia sinensis var. sinensis HOM05D006569 ORTHO05D007515 2.6e-24 117.1 102 53.9
Lj6g0009481 Lotus japonicus HOM05D006569 ORTHO05D007515 7.4e-24 115.5 301 63.5
Medtr3g053000 Medicago truncatula HOM05D006569 ORTHO05D007515 1.3e-23 114.8 301 49.2
CsaV3_7G024320 Cucumis sativus L. HOM05D006569 ORTHO05D007515 3.1e-22 110.2 304 53.3
Thhalv10012473m.g Eutrema salsugineum HOM05D006569 ORTHO05D007515 4.5e-21 106.3 302 28.1
SGA_v2.0_scaffold236G43766 Striga asiatica HOM05D006569 ORTHO05D007515 4.5e-21 106.3 294 49.3
Aa31LG11G14260 Aethionema arabicum HOM05D006569 ORTHO05D007515 2.9e-20 103.6 305 27.9
TWI60G0939 Tripterygium wilfordii HOM05D006569 ORTHO05D007515 5.0e-20 102.8 97 53.6
Dinv33774 Davidia involucrata HOM05D006569 ORTHO05D007515 6.5e-20 102.4 97 54.6
Prupe.3G265200 Prunus persica HOM05D006569 ORTHO05D007515 8.5e-20 102.1 310 61.6
Carub.0006s1347 Capsella rubella HOM05D006569 ORTHO05D007515 1.5e-19 101.3 303 27.1
SalBow6G2371 Salvia bowleyana HOM05D006569 ORTHO05D007515 1.9e-19 100.9 93 49.5
BraA02t05270Z Brassica rapa HOM05D006569 ORTHO05D007515 5.5e-19 99.4 303 26.1
Manes.01G092900 Manihot esculenta HOM05D006569 ORTHO05D007515 9.4e-19 98.6 97 52.6
GSVIVG01011442001 Vitis vinifera HOM05D006569 ORTHO05D007515 9.4e-19 98.6 101 50.5
Rhsim10G0036300 Rhododendron simsii HOM05D006569 ORTHO05D007515 1.2e-18 98.2 100 47.0
arahy.Tifrunner.gnm1.ann1.80L4ZA Arachis hypogaea HOM05D006569 ORTHO05D007515 2.7e-18 97.1 97 48.5
Cpa.g.sc14.98 Carica papaya HOM05D006569 ORTHO05D007515 6.1e-18 95.9 99 51.5
ClCG09G010340 Citrullus lanatus HOM05D006569 ORTHO05D007515 1.4e-17 94.7 100 49.0
RcHm_v2.0_Chr2g0167491 Rosa chinensis HOM05D006569 ORTHO05D007515 1.8e-17 94.4 271 65.7
COL.COLO4_10330 Corchorus olitorius HOM05D006569 ORTHO05D007515 5.2e-17 92.8 88 51.1
Potri.017G086000 Populus trichocarpa HOM05D006569 ORTHO05D007515 6.7e-17 92.4 96 49.0
Sabra17G0075800 Salix brachista HOM05D006569 ORTHO05D007515 8.8e-17 92.0 93 49.5
Lalb_Chr15g0081471 Lupinus albus HOM05D006569 ORTHO05D007515 2.0e-16 90.9 97 45.4
QL02p057930 Quercus lobata HOM05D006569 ORTHO05D007515 2.0e-16 90.9 270 28.1
Hund15592 Selenicereus undatus HOM05D006569 ORTHO05D007515 2.0e-16 90.9 91 49.5
Sc10g0003480 Simmondsia chinensis HOM05D006569 ORTHO05D007515 2.6e-16 90.5 99 47.5
MSTRG.15471 Avicennia marina HOM05D006569 ORTHO05D007515 5.7e-16 89.4 103 43.7
PGR004G0299 Punica granatum HOM05D006569 ORTHO05D007515 5.7e-16 89.4 93 49.5
A02p02990 Brassica napus HOM05D006569 ORTHO05D007515 7.5e-16 89.0 274 25.5
BcaNung03317 Brassica carinata HOM05D006569 ORTHO05D007515 1.7e-15 87.8 307 26.7
Sp6g28790 Schrenkiella parvula HOM05D006569 ORTHO05D007515 2.4e-14 84.0 302 24.8
AL6G26150 Arabidopsis lyrata HOM05D006569 ORTHO05D007515 5.3e-14 82.8 298 41.6
Eucgr.I01955 Eucalyptus grandis HOM05D006569 ORTHO05D007515 1.2e-13 81.6 100 44.0
Sed0017024 Sechium edule HOM05D006569 ORTHO05D007515 1.6e-13 81.3 86 47.7
AUR62034434 Chenopodium quinoa HOM05D006569 ORTHO05D007515 2.0e-13 80.9 104 40.4
MBI05_g36420_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 4.5e-13 79.7 89 46.1
Medtr3g052970 Medicago truncatula HOM05D006569 ORTHO05D007515 1.7e-12 77.8 86 43.0
PSO832G0544 Papaver somniferum HOM05D006569 ORTHO05D007515 6.5e-12 75.9 94 44.7
Ah.10g031720 Amaranthus hybridus HOM05D006569 ORTHO05D007515 8.5e-12 75.5 79 46.8
AT5G15280 Arabidopsis thaliana HOM05D006569 ORTHO05D007515 8.5e-12 75.5 100 43.0
Thecc.04G085800 Theobroma cacao HOM05D006569 ORTHO05D007515 1.1e-11 75.1 85 48.2
Cc07_g03540 Coffea canephora HOM05D006569 ORTHO05D007515 2.5e-11 73.9 93 45.2
CARHR198030 Cardamine hirsuta HOM05D006569 ORTHO05D007515 4.2e-11 73.2 100 40.0
HPP92_012677 Vanilla planifolia HOM05D006569 ORTHO05D007515 2.0e-08 64.3 87 42.5
BcaC03g13417 Brassica carinata HOM05D006569 ORTHO05D007515 9.8e-08 62.0 85 41.2
C02p07640 Brassica napus HOM05D006569 ORTHO05D007515 9.8e-08 62.0 85 41.2
BolC2t06696H Brassica oleracea HOM05D006569 ORTHO05D007515 9.8e-08 62.0 85 41.2
Atru.chr8.291 Acer truncatum HOM05D006569 ORTHO05D007515 3.7e-07 60.1 54 57.4
ATR1145G048 Amborella trichopoda HOM05D006569 ORTHO05D007515 4.8e-07 59.7 305 57.4
Zm00001eb005280 Zea mays HOM05D006569 ORTHO05D007515 4.8e-07 59.7 283 36.7
QL93p0100_0341 Quercus lobata HOM05D006569 ORTHO05D007515 1.1e-06 58.5 57 49.1
PSO013G0141 Papaver somniferum HOM05D006569 ORTHO05D007515 2.4e-06 57.4 70 47.1


User provided reference genes

Program Settings