Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0134351 Helianthus annuus HOM05D005555 ORTHO05D006923 1.2e-225 786.2 406 100.0
ECA240G0357 Erigeron canadensis HOM05D005555 ORTHO05D006923 4.3e-170 601.7 424 77.8
Lsat_1_v5_gn_2_47780 Lactuca sativa HOM05D005555 ORTHO05D006923 1.2e-159 567.0 426 73.7
HanXRQChr03g0076481 Helianthus annuus HOM05D005555 ORTHO05D006923 2.2e-158 562.8 406 76.8
Gorai.009G438400 Gossypium raimondii HOM05D005555 ORTHO05D006923 1.2e-156 557.0 426 71.4
Duzib268G1179 Durio zibethinus HOM05D005555 ORTHO05D006923 6.0e-156 554.7 426 71.1
Dinv22259 Davidia involucrata HOM05D005555 ORTHO05D006923 1.7e-155 553.1 429 71.6
CSS0046165 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 5.1e-155 551.6 422 71.8
Eucgr.F03470 Eucalyptus grandis HOM05D005555 ORTHO05D006923 1.1e-154 550.4 424 71.0
GSVIVG01037655001 Vitis vinifera HOM05D005555 ORTHO05D006923 9.5e-154 547.4 429 70.6
TWI39G0347 Tripterygium wilfordii HOM05D005555 ORTHO05D006923 6.8e-152 541.2 424 70.0
Gohir.A04G016500 Gossypium hirsutum HOM05D005555 ORTHO05D006923 1.5e-151 540.0 426 69.7
Lj8C169T24 Lonicera japonica HOM05D005555 ORTHO05D006923 3.8e-150 535.4 464 65.7
TAR627G0887 Trochodendron aralioides HOM05D005555 ORTHO05D006923 4.9e-150 535.0 429 69.9
Thecc.07G035900 Theobroma cacao HOM05D005555 ORTHO05D006923 1.9e-149 533.1 426 69.7
THA.LOC104817858 Tarenaya hassleriana HOM05D005555 ORTHO05D006923 7.1e-149 531.2 427 69.6
QL08p010014 Quercus lobata HOM05D005555 ORTHO05D006923 1.2e-148 530.4 423 68.8
Ciclev10008353m.g Citrus clementina HOM05D005555 ORTHO05D006923 2.1e-148 529.6 424 70.8
Gohir.D05G369700 Gossypium hirsutum HOM05D005555 ORTHO05D006923 3.5e-148 528.9 419 69.5
CsaV3_7G021840 Cucumis sativus L. HOM05D005555 ORTHO05D006923 4.6e-148 528.5 427 67.9
CSS0038584 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 1.3e-147 526.9 427 68.9
Rhsim06G0217300 Rhododendron simsii HOM05D005555 ORTHO05D006923 8.7e-147 524.2 442 66.7
Cpa.g.sc12.303 Carica papaya HOM05D005555 ORTHO05D006923 1.1e-146 523.9 419 68.5
Migut.M01757 Erythranthe guttata HOM05D005555 ORTHO05D006923 1.5e-146 523.5 429 66.9
Manes.15G071400 Manihot esculenta HOM05D005555 ORTHO05D006923 1.9e-146 523.1 424 68.9
Actinidia35345 Actinidia chinensis HOM05D005555 ORTHO05D006923 5.6e-146 521.5 422 69.7
MSTRG.6923 Avicennia marina HOM05D005555 ORTHO05D006923 2.1e-145 519.6 429 66.9
Sed0005603 Sechium edule HOM05D005555 ORTHO05D006923 2.1e-145 519.6 430 67.4
Sp1g37550 Schrenkiella parvula HOM05D005555 ORTHO05D006923 8.1e-145 517.7 423 69.5
arahy.Tifrunner.gnm1.ann1.P3VUIG Arachis hypogaea HOM05D005555 ORTHO05D006923 2.4e-144 516.2 435 66.7
Lj6g0008930 Lotus japonicus HOM05D005555 ORTHO05D006923 4.0e-144 515.4 431 65.4
Carub.0001s3974 Capsella rubella HOM05D005555 ORTHO05D006923 6.9e-144 514.6 423 68.1
AT1G50710 Arabidopsis thaliana HOM05D005555 ORTHO05D006923 1.2e-143 513.8 423 68.1
BcaC08g43248 Brassica carinata HOM05D005555 ORTHO05D006923 1.5e-143 513.5 421 68.9
C06p05960 Brassica napus HOM05D005555 ORTHO05D006923 1.5e-143 513.5 421 68.9
BolC6t35709H Brassica oleracea HOM05D005555 ORTHO05D006923 1.5e-143 513.5 421 68.9
A06p02920 Brassica napus HOM05D005555 ORTHO05D006923 2.0e-143 513.1 421 68.9
BraA06t23497Z Brassica rapa HOM05D005555 ORTHO05D006923 2.0e-143 513.1 421 68.9
AL1G58400 Arabidopsis lyrata HOM05D005555 ORTHO05D006923 5.8e-143 511.5 421 68.2
arahy.Tifrunner.gnm1.ann1.UR7PB1 Arachis hypogaea HOM05D005555 ORTHO05D006923 5.8e-143 511.5 430 66.5
Thhalv10011513m.g Eutrema salsugineum HOM05D005555 ORTHO05D006923 5.8e-143 511.5 421 68.4
BcaC08g43250 Brassica carinata HOM05D005555 ORTHO05D006923 1.3e-142 510.4 421 68.2
CANSAT11G1088 Cannabis sativa HOM05D005555 ORTHO05D006923 1.7e-142 510.0 421 68.4
Aa31LG10G3630 Aethionema arabicum HOM05D005555 ORTHO05D006923 2.9e-142 509.2 428 67.3
Gorai.009G438500 Gossypium raimondii HOM05D005555 ORTHO05D006923 4.9e-142 508.4 426 67.1
Hund15555 Selenicereus undatus HOM05D005555 ORTHO05D006923 4.9e-142 508.4 424 65.8
Prupe.3G065100 Prunus persica HOM05D005555 ORTHO05D006923 1.1e-141 507.3 416 67.3
RcHm_v2.0_Chr2g0139231 Rosa chinensis HOM05D005555 ORTHO05D006923 1.1e-141 507.3 420 66.7
arahy.Tifrunner.gnm1.ann1.QY89IE Arachis hypogaea HOM05D005555 ORTHO05D006923 2.4e-141 506.1 432 66.0
Lalb_Chr20g0113831 Lupinus albus HOM05D005555 ORTHO05D006923 3.2e-141 505.8 430 65.3
PSO541G4760 Papaver somniferum HOM05D005555 ORTHO05D006923 5.4e-141 505.0 429 65.3
Solyc12g005050.2 Solanum lycopersicum HOM05D005555 ORTHO05D006923 9.3e-141 504.2 429 66.4
DCAR_016709 Daucus carota HOM05D005555 ORTHO05D006923 1.2e-140 503.8 424 67.2
Nn1g07133 Nelumbo nucifera HOM05D005555 ORTHO05D006923 1.6e-140 503.4 427 65.3
Atru.chr2.3417 Acer truncatum HOM05D005555 ORTHO05D006923 2.1e-140 503.1 422 67.8
CiPaw.11G190000 Carya illinoinensis HOM05D005555 ORTHO05D006923 2.1e-140 503.1 421 67.0
CARHR040810 Cardamine hirsuta HOM05D005555 ORTHO05D006923 3.5e-140 502.3 423 67.6
SGA_v2.0_scaffold172G39000 Striga asiatica HOM05D005555 ORTHO05D006923 3.5e-140 502.3 436 63.5
CiPaw.12G130100 Carya illinoinensis HOM05D005555 ORTHO05D006923 4.6e-140 501.9 423 66.0
PGR031G0129 Punica granatum HOM05D005555 ORTHO05D006923 1.0e-139 500.7 430 66.0
VMungo0540G1244 Vigna mungo HOM05D005555 ORTHO05D006923 1.7e-139 500.0 428 64.7
Sopen12g001050 Solanum pennellii HOM05D005555 ORTHO05D006923 2.3e-139 499.6 429 66.0
Glyma.08G316800 Glycine max HOM05D005555 ORTHO05D006923 3.0e-139 499.2 428 64.3
BcaB02g11175 Brassica carinata HOM05D005555 ORTHO05D006923 5.1e-139 498.4 420 68.1
Nitab4.5_0008473g0010 Nicotiana tabacum HOM05D005555 ORTHO05D006923 5.1e-139 498.4 435 64.6
Aqoxy1G02148 Aquilegia oxysepala HOM05D005555 ORTHO05D006923 1.5e-138 496.9 427 64.9
FAN14G2902 Fragaria x ananassa HOM05D005555 ORTHO05D006923 2.5e-138 496.1 429 64.3
MD17G1190200 Malus domestica HOM05D005555 ORTHO05D006923 4.3e-138 495.4 420 65.5
TPR.G33802 Trifolium pratense HOM05D005555 ORTHO05D006923 4.3e-138 495.4 441 63.9
Cc05_g13620 Coffea canephora HOM05D005555 ORTHO05D006923 9.6e-138 494.2 427 63.9
Potri.011G090800 Populus trichocarpa HOM05D005555 ORTHO05D006923 9.6e-138 494.2 427 66.3
PGSC0003DMG400027869 Solanum tuberosum HOM05D005555 ORTHO05D006923 2.1e-137 493.0 430 65.1
Glyma.18G096300 Glycine max HOM05D005555 ORTHO05D006923 2.8e-137 492.7 428 63.3
FAN05G3309 Fragaria x ananassa HOM05D005555 ORTHO05D006923 3.6e-137 492.3 428 63.8
Phvul.006G044000 Phaseolus vulgaris HOM05D005555 ORTHO05D006923 4.8e-137 491.9 428 64.0
Cc07_g19690 Coffea canephora HOM05D005555 ORTHO05D006923 1.8e-136 490.0 427 63.9
PSO675G4173 Papaver somniferum HOM05D005555 ORTHO05D006923 4.0e-136 488.8 429 63.4
CAN.G542.3 Capsicum annuum HOM05D005555 ORTHO05D006923 2.0e-135 486.5 428 64.5
FAN02G4472 Fragaria x ananassa HOM05D005555 ORTHO05D006923 4.5e-135 485.3 403 65.8
Medtr3g052180 Medicago truncatula HOM05D005555 ORTHO05D006923 8.4e-134 481.1 429 63.2
Nn1g03520 Nelumbo nucifera HOM05D005555 ORTHO05D006923 1.4e-133 480.3 432 62.3
Psat5g178680 Pisum sativum HOM05D005555 ORTHO05D006923 1.4e-133 480.3 427 62.3
DCAR_001508 Daucus carota HOM05D005555 ORTHO05D006923 1.9e-133 479.9 424 65.3
EL10Ac2g03146 Beta vulgaris HOM05D005555 ORTHO05D006923 4.2e-133 478.8 445 62.0
Medtr5g049170 Medicago truncatula HOM05D005555 ORTHO05D006923 4.6e-132 475.3 429 62.5
ClCG09G010820 Citrullus lanatus HOM05D005555 ORTHO05D006923 1.0e-131 474.2 474 59.1
BraA05t20906Z Brassica rapa HOM05D005555 ORTHO05D006923 1.3e-131 473.8 414 66.7
CDE04G3207 Ceratophyllum demersum HOM05D005555 ORTHO05D006923 1.8e-131 473.4 425 62.4
A05p19990 Brassica napus HOM05D005555 ORTHO05D006923 1.1e-130 470.7 414 66.9
MELO3C013162.2 Cucumis melo HOM05D005555 ORTHO05D006923 1.9e-130 469.9 438 62.1
arahy.Tifrunner.gnm1.ann1.GVQ212 Arachis hypogaea HOM05D005555 ORTHO05D006923 5.6e-130 468.4 467 59.1
CSS0007038 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 2.1e-129 466.5 440 63.4
Nitab4.5_0000981g0050 Nicotiana tabacum HOM05D005555 ORTHO05D006923 1.8e-128 463.4 474 57.6
unitig_744.g24404 Utricularia gibba HOM05D005555 ORTHO05D006923 6.9e-128 461.5 427 60.7
Ah.10g032310 Amaranthus hybridus HOM05D005555 ORTHO05D006923 1.2e-127 460.7 427 62.3
BcaB07g33510 Brassica carinata HOM05D005555 ORTHO05D006923 1.5e-127 460.3 434 62.2
Sabra11G0086200 Salix brachista HOM05D005555 ORTHO05D006923 1.3e-126 457.2 423 63.6
Sc03g0008570 Simmondsia chinensis HOM05D005555 ORTHO05D006923 2.2e-126 456.4 380 67.6
MD09G1208700 Malus domestica HOM05D005555 ORTHO05D006923 2.7e-124 449.5 409 62.3
Ca_14731_v3 Cicer arietinum L. HOM05D005555 ORTHO05D006923 1.9e-122 443.4 506 52.0
vmacro11723 Vaccinium macrocarpon HOM05D005555 ORTHO05D006923 9.6e-122 441.0 515 54.6
MD03G1200100 Malus domestica HOM05D005555 ORTHO05D006923 2.8e-121 439.5 422 59.5
MBI05_g12021_MAGBIO Magnolia biondii HOM05D005555 ORTHO05D006923 1.8e-120 436.8 420 61.0
AUR62018195 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.2e-119 434.1 409 62.3
ATR0752G192 Amborella trichopoda HOM05D005555 ORTHO05D006923 2.6e-119 433.0 419 58.2
HPP92_010410 Vanilla planifolia HOM05D005555 ORTHO05D006923 8.4e-118 427.9 425 57.6
Peaxi162Scf00660g00816 Petunia axillaris HOM05D005555 ORTHO05D006923 1.4e-117 427.2 385 64.2
Dinv40759 Davidia involucrata HOM05D005555 ORTHO05D006923 5.3e-112 408.7 377 64.2
Gohir.D05G369900 Gossypium hirsutum HOM05D005555 ORTHO05D006923 3.8e-110 402.5 425 57.4
RcHm_v2.0_Chr5g0039771 Rosa chinensis HOM05D005555 ORTHO05D006923 3.6e-108 396.0 419 55.1
Gohir.D05G370300 Gossypium hirsutum HOM05D005555 ORTHO05D006923 1.8e-107 393.7 379 60.9
Cfa020338 Carpinus fangiana HOM05D005555 ORTHO05D006923 8.8e-107 391.3 379 61.5
Haze_09680 Corylus avellana HOM05D005555 ORTHO05D006923 4.3e-106 389.0 461 53.8
SMO352G0045 Selaginella moellendorffii HOM05D005555 ORTHO05D006923 8.2e-105 384.8 398 54.3
FvH4_3g22760 Fragaria vesca HOM05D005555 ORTHO05D006923 3.4e-103 379.4 415 54.9
AUR62038682 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.1e-101 374.4 396 57.1
Mapoly0032s0110 Marchantia polymorpha HOM05D005555 ORTHO05D006923 7.9e-100 368.2 425 50.4
Prupe.4G214200 Prunus persica HOM05D005555 ORTHO05D006923 3.9e-99 365.9 363 57.3
FvH4_6g31880 Fragaria vesca HOM05D005555 ORTHO05D006923 1.8e-96 357.1 318 63.2
Zm00001eb230170 Zea mays HOM05D005555 ORTHO05D006923 1.8e-96 357.1 413 52.1
Pp3c17_11280 Physcomitrium patens HOM05D005555 ORTHO05D006923 7.0e-96 355.1 392 52.8
Sed0020027 Sechium edule HOM05D005555 ORTHO05D006923 1.4e-93 347.4 390 55.4
FAN16G3656 Fragaria x ananassa HOM05D005555 ORTHO05D006923 3.0e-91 339.7 396 52.3
TPR.G5778 Trifolium pratense HOM05D005555 ORTHO05D006923 5.2e-91 339.0 344 57.8
arahy.Tifrunner.gnm1.ann1.92YVPD Arachis hypogaea HOM05D005555 ORTHO05D006923 1.1e-90 337.8 420 48.3
arahy.Tifrunner.gnm1.ann1.21WID0 Arachis hypogaea HOM05D005555 ORTHO05D006923 1.0e-86 324.7 422 46.0
FAN25G0297 Fragaria x ananassa HOM05D005555 ORTHO05D006923 5.2e-75 285.8 358 50.8
Medtr5g049150 Medicago truncatula HOM05D005555 ORTHO05D006923 2.3e-59 233.8 221 60.2
CBR_g19746 Chara braunii HOM05D005555 ORTHO05D006923 3.4e-50 203.4 376 35.9
CBR_g6714 Chara braunii HOM05D005555 ORTHO05D006923 1.6e-47 194.5 423 34.8
Os02g0119100 Oryza sativa ssp. japonica HOM05D005555 ORTHO05D006923 7.3e-29 132.5 209 45.9
TPR.G5733 Trifolium pratense HOM05D005555 ORTHO05D006923 1.3e-28 131.7 83 78.3
Lsat_1_v5_gn_9_94361 Lactuca sativa HOM05D005555 ORTHO05D006923 7.6e-18 95.9 55 87.3
Hma1.2p1_0206F.1_g087650 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 3.2e-16 90.5 46 91.3
Hma1.2p1_0545F.1_g176020 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 3.2e-16 90.5 46 91.3


User provided reference genes

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