Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 1.1e-156 556.6 273 100.0
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 2.3e-79 299.7 277 60.3
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 1.1e-63 247.7 280 48.2
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 1.4e-60 237.3 266 49.2
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 2.5e-57 226.5 287 44.3
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 9.5e-57 224.6 298 43.6
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 3.6e-56 222.6 292 46.2
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 4.7e-56 222.2 295 43.4
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 6.2e-56 221.9 288 45.5
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 1.1e-55 221.1 294 43.2
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.1e-55 221.1 293 42.3
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 1.4e-55 220.7 295 44.1
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 6.8e-55 218.4 292 44.9
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 6.8e-55 218.4 306 42.8
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 8.3e-53 211.5 322 40.7
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 8.3e-53 211.5 279 44.4
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 3.2e-52 209.5 281 45.2
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 4.1e-52 209.1 294 43.5
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 9.2e-52 208.0 296 39.5
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 2.7e-51 206.5 300 42.7
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 3.5e-51 206.1 244 46.3
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 4.6e-51 205.7 290 43.8
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 4.6e-51 205.7 286 41.3
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 7.8e-51 204.9 290 43.4
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 1.7e-50 203.8 281 43.1
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 5.1e-50 202.2 271 43.5
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 6.6e-50 201.8 291 43.0
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 1.5e-49 200.7 294 40.8
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 1.9e-49 200.3 292 40.8
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.9e-49 200.3 299 40.1
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 4.3e-49 199.1 300 41.7
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 2.8e-48 196.4 286 40.2
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 1.4e-47 194.1 246 46.3
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.4e-47 194.1 275 43.3
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 2.6e-46 189.9 296 40.5
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 3.4e-46 189.5 304 40.5
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 1.3e-45 187.6 293 39.6
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 2.9e-45 186.4 253 43.9
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 8.4e-45 184.9 273 42.1
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 2.4e-44 183.3 273 41.4
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 4.2e-44 182.6 288 41.0
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 2.7e-43 179.9 270 42.2
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 3.5e-43 179.5 306 38.6
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 3.3e-41 172.9 278 38.5
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 1.6e-40 170.6 280 39.3
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 2.8e-40 169.9 287 37.3
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 2.8e-40 169.9 289 35.3
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 3.1e-39 166.4 275 38.5
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 4.0e-39 166.0 296 35.1
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 1.5e-38 164.1 290 35.2
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 2.0e-38 163.7 299 34.8
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 2.0e-38 163.7 368 32.9
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 4.4e-38 162.5 290 35.5
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 7.6e-38 161.8 283 35.3
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 3.8e-37 159.5 292 34.9
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 1.9e-36 157.1 291 31.6
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 9.3e-36 154.8 316 32.9
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 3.5e-35 152.9 291 33.3
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 4.6e-35 152.5 291 33.0
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 6.0e-35 152.1 290 34.5
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 1.7e-34 150.6 291 33.0
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 1.7e-34 150.6 291 33.0
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 2.3e-34 150.2 278 33.1
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 5.1e-34 149.1 291 32.6
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 6.6e-34 148.7 254 37.0
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 3.3e-33 146.4 291 32.3
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 7.3e-33 145.2 224 38.4
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 1.6e-32 144.1 292 35.3
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 4.8e-32 142.5 232 39.2
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 4.8e-32 142.5 184 42.4
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 3.1e-31 139.8 200 40.5
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 3.4e-30 136.3 174 43.1
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 5.8e-30 135.6 294 29.9
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 7.1e-28 128.6 211 36.0
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 1.6e-24 117.5 172 37.2
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 2.8e-24 116.7 253 33.6
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 3.7e-24 116.3 173 43.4
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 3.0e-18 96.7 95 51.6
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 5.1e-18 95.9 221 33.0
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 4.1e-15 86.3 200 31.5
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.3e-13 81.3 174 33.9
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 4.2e-12 76.3 71 56.3
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 2.3e-10 70.5 230 27.0
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 8.7e-10 68.6 180 32.2
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 5.7e-09 65.9 139 33.8
HanXRQChr14g0462751 Helianthus annuus HOM05D003067 ORTHO05D009378 2.4e-07 60.5 37 86.5
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 9.0e-07 58.5 114 28.9


User provided reference genes

Program Settings