Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0132941 Helianthus annuus HOM05D000544 ORTHO05D224089 5.8e-36 153.7 76 100.0
HanXRQChr15g0496281 Helianthus annuus HOM05D000544 ORTHO05D000479 5.1e-08 60.8 35 82.9
HanXRQChr15g0496291 Helianthus annuus HOM05D000544 ORTHO05D000479 5.1e-08 60.8 35 82.9
TAR623G0117 Trochodendron aralioides HOM05D000544 ORTHO05D000479 8.7e-08 60.1 35 77.1
ECA232G0628 Erigeron canadensis HOM05D000544 ORTHO05D000479 1.1e-07 59.7 35 80.0
Rhsim05G0216400 Rhododendron simsii HOM05D000544 ORTHO05D000479 3.3e-07 58.2 35 77.1
Dinv23127 Davidia involucrata HOM05D000544 ORTHO05D000479 4.3e-07 57.8 35 74.3
Lsat_1_v5_gn_2_123580 Lactuca sativa HOM05D000544 ORTHO05D000479 4.3e-07 57.8 35 77.1
Rhsim09G0177500 Rhododendron simsii HOM05D000544 ORTHO05D000479 5.6e-07 57.4 35 74.3
TAR369G0351 Trochodendron aralioides HOM05D000544 ORTHO05D000479 7.3e-07 57.0 35 74.3
vmacro20284 Vaccinium macrocarpon HOM05D000544 ORTHO05D000479 9.6e-07 56.6 35 74.3
Nitab4.5_0000490g0040 Nicotiana tabacum HOM05D000544 ORTHO05D000479 1.2e-06 56.2 33 78.8
PSO339G0713 Papaver somniferum HOM05D000544 ORTHO05D000479 1.2e-06 56.2 35 74.3
Migut.J00159 Erythranthe guttata HOM05D000544 ORTHO05D000479 1.6e-06 55.8 33 72.7
Hma1.2p1_0703F.1_g206310 Hydrangea macrophylla HOM05D000544 ORTHO05D000479 1.6e-06 55.8 35 68.6
Lsat_1_v5_gn_9_61540 Lactuca sativa HOM05D000544 ORTHO05D000479 1.6e-06 55.8 33 78.8
Lj8A67T41 Lonicera japonica HOM05D000544 ORTHO05D000479 1.6e-06 55.8 35 71.4
Nn2g10852 Nelumbo nucifera HOM05D000544 ORTHO05D000479 1.6e-06 55.8 35 71.4
Nn2g13140 Nelumbo nucifera HOM05D000544 ORTHO05D000479 1.6e-06 55.8 35 71.4
vmacro10039 Vaccinium macrocarpon HOM05D000544 ORTHO05D000479 1.6e-06 55.8 35 74.3
Actinidia11581 Actinidia chinensis HOM05D000544 ORTHO05D000479 2.1e-06 55.5 35 71.4
Manes.07G130200 Manihot esculenta HOM05D000544 ORTHO05D000479 2.1e-06 55.5 33 75.8
PSO384G4906 Papaver somniferum HOM05D000544 ORTHO05D000479 2.1e-06 55.5 35 74.3
unitig_578.g15898 Utricularia gibba HOM05D000544 ORTHO05D000479 2.1e-06 55.5 34 73.5
Aqoxy4G02544 Aquilegia oxysepala HOM05D000544 ORTHO05D000479 2.8e-06 55.1 35 71.4
MSTRG.5571 Avicennia marina HOM05D000544 ORTHO05D000479 2.8e-06 55.1 33 72.7
CDE06G2719 Ceratophyllum demersum HOM05D000544 ORTHO05D000479 2.8e-06 55.1 35 68.6
Dinv10617 Davidia involucrata HOM05D000544 ORTHO05D000479 2.8e-06 55.1 35 71.4
Hma1.2p1_0805F.1_g221281 Hydrangea macrophylla HOM05D000544 ORTHO05D000479 2.8e-06 55.1 35 71.4
Hma1.2p1_0805F.1_g221290 Hydrangea macrophylla HOM05D000544 ORTHO05D000479 2.8e-06 55.1 35 71.4
Nitab4.5_0001455g0020 Nicotiana tabacum HOM05D000544 ORTHO05D000479 3.6e-06 54.7 31 80.6
SGA_v2.0_scaffold85G26730 Striga asiatica HOM05D000544 ORTHO05D000479 3.6e-06 54.7 33 72.7
Actinidia13940 Actinidia chinensis HOM05D000544 ORTHO05D000479 4.7e-06 54.3 35 68.6
CSS0039445 Camellia sinensis var. sinensis HOM05D000544 ORTHO05D000479 4.7e-06 54.3 35 71.4
Cc06_g01280 Coffea canephora HOM05D000544 ORTHO05D000479 4.7e-06 54.3 33 72.7
Dinv13390 Davidia involucrata HOM05D000544 ORTHO05D000479 4.7e-06 54.3 32 78.1
Hma1.2p1_0362F.1_g136320 Hydrangea macrophylla HOM05D000544 ORTHO05D000479 4.7e-06 54.3 35 65.7
Hma1.2p1_3151F.1_g333236 Hydrangea macrophylla HOM05D000544 ORTHO05D000479 4.7e-06 54.3 35 65.7
Lsat_1_v5_gn_9_34720 Lactuca sativa HOM05D000544 ORTHO05D000479 4.7e-06 54.3 33 75.8
Nitab4.5_0007414g0010 Nicotiana tabacum HOM05D000544 ORTHO05D000479 4.7e-06 54.3 33 75.8
CSS0017989 Camellia sinensis var. sinensis HOM05D000544 ORTHO05D000479 6.2e-06 53.9 35 65.7
Solyc10g085180.2 Solanum lycopersicum HOM05D000544 ORTHO05D000479 6.2e-06 53.9 33 75.8
Sopen10g034650 Solanum pennellii HOM05D000544 ORTHO05D000479 6.2e-06 53.9 38 68.4
GSVIVG01011162001 Vitis vinifera HOM05D000544 ORTHO05D000479 6.2e-06 53.9 33 72.7
CSS0018844 Camellia sinensis var. sinensis HOM05D000544 ORTHO05D000479 8.1e-06 53.5 32 78.1
CDE08G1424 Ceratophyllum demersum HOM05D000544 ORTHO05D000479 8.1e-06 53.5 35 65.7
SGA_v2.0_scaffold110G31213 Striga asiatica HOM05D000544 ORTHO05D000479 8.1e-06 53.5 33 72.7


User provided reference genes

Program Settings