Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0132881 Helianthus annuus HOM05D003436 ORTHO05D003674 3.7e-80 301.6 164 100.0
ECA236G0475 Erigeron canadensis HOM05D000402 ORTHO05D000263 4.5e-54 214.9 158 75.9
HanXRQChr02g0048381 Helianthus annuus HOM05D003436 ORTHO05D003674 2.1e-51 206.1 115 93.9
Nitab4.5_0008334g0020 Nicotiana tabacum HOM05D003436 ORTHO05D003674 7.0e-39 164.5 157 63.1
SGA_v2.0_scaffold105G30485 Striga asiatica HOM05D003436 ORTHO05D003674 7.0e-39 164.5 125 71.2
Oeu033740.1 Olea europaea HOM05D003436 ORTHO05D003674 2.0e-38 162.9 154 61.7
Glyma.19G147200 Glycine max HOM05D003436 ORTHO05D003674 3.5e-38 162.2 176 58.0
Peaxi162Scf00258g00520 Petunia axillaris HOM05D003436 ORTHO05D003674 6.0e-38 161.4 157 61.1
Glyma.03G144400 Glycine max HOM05D003436 ORTHO05D003674 7.8e-38 161.0 166 58.4
DCAR_013554 Daucus carota HOM05D003436 ORTHO05D003674 5.0e-37 158.3 168 57.1
Phvul.001G143100 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 6.6e-37 157.9 166 57.8
MD12G1057800 Malus domestica HOM05D003436 ORTHO05D003674 1.1e-36 157.1 172 58.1
Nitab4.5_0001538g0030 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.5e-36 156.8 160 61.9
Eucgr.K01836 Eucalyptus grandis HOM05D003436 ORTHO05D003674 5.6e-36 154.8 165 57.6
Aa31sc24G30 Aethionema arabicum HOM05D003436 ORTHO05D003674 7.3e-36 154.5 159 59.7
VMungo1383G0252 Vigna mungo HOM05D003436 ORTHO05D003674 7.3e-36 154.5 165 57.6
Nitab4.5_0000105g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.2e-35 153.7 160 61.2
Peaxi162Scf00003g04347 Petunia axillaris HOM05D003436 ORTHO05D003674 3.6e-35 152.1 157 61.1
Ciclev10012978m.g Citrus clementina HOM05D003436 ORTHO05D003674 1.4e-34 150.2 160 58.1
PSO339G4457 Papaver somniferum HOM05D003436 ORTHO05D003674 1.4e-34 150.2 165 58.8
ClCG04G002110 Citrullus lanatus HOM05D003436 ORTHO05D003674 2.3e-34 149.4 169 55.6
Sed0015125 Sechium edule HOM05D003436 ORTHO05D003674 4.0e-34 148.7 188 52.1
Migut.J01829 Erythranthe guttata HOM05D003436 ORTHO05D003674 2.0e-33 146.4 160 58.1
Ca_08518_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 4.4e-33 145.2 164 54.3
RcHm_v2.0_Chr3g0479771 Rosa chinensis HOM05D003436 ORTHO05D003674 4.4e-33 145.2 170 53.5
CsaV3_4G030630 Cucumis sativus L. HOM05D003436 ORTHO05D003674 5.8e-33 144.8 177 53.7
MELO3C008930.2 Cucumis melo HOM05D003436 ORTHO05D003674 3.2e-31 139.0 162 56.2
arahy.Tifrunner.gnm1.ann1.BAUA8N Arachis hypogaea HOM05D003436 ORTHO05D003674 9.2e-31 137.5 156 53.2
COL.COLO4_33990 Corchorus olitorius HOM05D011887 ORTHO05D003674 1.6e-30 136.7 136 58.8
Prupe.7G076400 Prunus persica HOM05D003436 ORTHO05D003674 1.6e-30 136.7 172 51.2
FAN02G3232 Fragaria x ananassa HOM05D003436 ORTHO05D003674 2.7e-30 136.0 171 50.9
Potri.016G046350 Populus trichocarpa HOM05D003436 ORTHO05D003674 4.6e-30 135.2 163 53.4
TWI74G0976 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 7.8e-30 134.4 143 57.3
Nitab4.5_0000324g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.0e-29 134.0 155 58.7
TWI53G0478 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 1.0e-29 134.0 143 56.6
arahy.Tifrunner.gnm1.ann1.6M6V4C Arachis hypogaea HOM05D003436 ORTHO05D003674 1.7e-29 133.3 173 50.3
Dinv14293 Davidia involucrata HOM05D003436 ORTHO05D003674 8.6e-29 131.0 164 54.3
Psat3g068920 Pisum sativum HOM05D003436 ORTHO05D003674 1.9e-28 129.8 200 49.5
FvH4_6g22410 Fragaria vesca HOM05D003436 ORTHO05D003674 3.3e-28 129.0 169 50.9
FAN14G5712 Fragaria x ananassa HOM05D003436 ORTHO05D003674 4.3e-28 128.6 169 50.9
Sc19g0007020 Simmondsia chinensis HOM05D003436 ORTHO05D003674 7.3e-28 127.9 165 53.3
Cpa.g.sc85.72 Carica papaya HOM05D003436 ORTHO05D003674 2.1e-27 126.3 164 51.2
C03p03280 Brassica napus HOM05D003436 ORTHO05D003674 3.6e-27 125.6 161 52.2
CANSAT64G0020 Cannabis sativa HOM05D003436 ORTHO05D003674 8.1e-27 124.4 160 53.1
AUR62015378 Chenopodium quinoa HOM05D003436 ORTHO05D003674 1.4e-26 123.6 190 46.3
Medtr7g093170 Medicago truncatula HOM05D003436 ORTHO05D003674 1.4e-26 123.6 192 47.4
Lj1g0001300 Lotus japonicus HOM05D003436 ORTHO05D003674 3.1e-26 122.5 175 49.1
AUR62012039 Chenopodium quinoa HOM05D003436 ORTHO05D003674 4.0e-26 122.1 194 44.8
Thecc.05G170800 Theobroma cacao HOM05D003436 ORTHO05D003674 4.0e-26 122.1 168 49.4
MSTRG.19903 Avicennia marina HOM05D003436 ORTHO05D003674 1.2e-25 120.6 102 63.7
Lsat_1_v5_gn_5_146120 Lactuca sativa HOM05D003436 ORTHO05D003674 3.4e-25 119.0 87 73.6
Manes.08G044900 Manihot esculenta HOM05D003436 ORTHO05D003674 7.5e-25 117.9 162 48.8
Aqoxy7G03903 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 9.9e-25 117.5 144 54.2
A10p29610 Brassica napus HOM05D003436 ORTHO05D003674 2.2e-24 116.3 160 48.8
BraA10t45003Z Brassica rapa HOM05D003436 ORTHO05D003674 2.2e-24 116.3 160 48.8
Dinv24076 Davidia involucrata HOM05D003436 ORTHO05D003674 2.9e-24 115.9 118 59.3
C09p69990 Brassica napus HOM05D003436 ORTHO05D003674 3.7e-24 115.5 160 48.1
BolC9t59741H Brassica oleracea HOM05D003436 ORTHO05D003674 3.7e-24 115.5 160 48.1
ATR0605G384 Amborella trichopoda HOM05D003436 ORTHO05D003674 4.9e-24 115.2 162 47.5
Dinv14294 Davidia involucrata HOM05D003436 ORTHO05D003674 6.4e-24 114.8 154 51.9
BcaC06g32392 Brassica carinata HOM05D003436 ORTHO05D003674 1.1e-23 114.0 160 47.5
BcaB01g06002 Brassica carinata HOM05D003436 ORTHO05D003674 1.9e-23 113.2 162 48.1
Cc06_g15980 Coffea canephora HOM05D003436 ORTHO05D003674 1.9e-23 113.2 154 50.0
Gohir.A01G191700 Gossypium hirsutum HOM05D003436 ORTHO05D003674 1.9e-23 113.2 167 46.7
Phvul.001G142000 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 1.9e-23 113.2 118 55.9
Lj5g0013312 Lotus japonicus HOM05D003436 ORTHO05D003674 3.2e-23 112.5 171 48.5
MBI04_g39831_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 4.1e-23 112.1 155 49.0
Gohir.D01G178300 Gossypium hirsutum HOM05D003436 ORTHO05D003674 1.6e-22 110.2 167 46.1
Gorai.002G224800 Gossypium raimondii HOM05D003436 ORTHO05D003674 1.6e-22 110.2 167 46.1
Ah.08g210350 Amaranthus hybridus HOM05D003436 ORTHO05D003674 2.1e-22 109.8 166 47.6
CARHR206420 Cardamine hirsuta HOM05D003436 ORTHO05D003674 2.7e-22 109.4 158 48.1
Lalb_Chr04g0261031 Lupinus albus HOM05D003436 ORTHO05D003674 3.5e-22 109.0 149 49.0
Lsat_1_v5_gn_8_74401 Lactuca sativa HOM05D003436 ORTHO05D003674 2.3e-21 106.3 164 48.8
Aqoxy6G00181 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 5.1e-21 105.1 143 50.3
C03p03320 Brassica napus HOM05D003436 ORTHO05D003674 8.6e-21 104.4 162 46.9
BolC3t12875H Brassica oleracea HOM05D003436 ORTHO05D003674 8.6e-21 104.4 162 46.9
Ca_25707_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 1.1e-20 104.0 171 48.0
Thhalv10014897m.g Eutrema salsugineum HOM05D003436 ORTHO05D003674 1.1e-20 104.0 161 46.6
MBI04_g14513_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 1.1e-20 104.0 156 46.8
A03p02880 Brassica napus HOM05D003436 ORTHO05D003674 2.5e-20 102.8 161 46.6
BraA03t09652Z Brassica rapa HOM05D003436 ORTHO05D003674 2.5e-20 102.8 161 46.6
BcaC06g32544 Brassica carinata HOM05D003436 ORTHO05D003674 3.3e-20 102.4 160 45.6
THA.LOC104826769 Tarenaya hassleriana HOM05D003436 ORTHO05D003674 3.3e-20 102.4 157 50.3
Actinidia22034 Actinidia chinensis HOM05D003436 ORTHO05D003674 5.6e-20 101.7 163 47.9
Medtr1g053970 Medicago truncatula HOM05D003436 ORTHO05D003674 7.3e-20 101.3 178 44.4
AT5G06760 Arabidopsis thaliana HOM05D003436 ORTHO05D003674 2.1e-19 99.8 159 47.2
BcaB01g06022 Brassica carinata HOM05D003436 ORTHO05D003674 2.1e-19 99.8 162 46.3
BcaB01g06026 Brassica carinata HOM05D003436 ORTHO05D003674 2.1e-19 99.8 162 46.3
Psat6g120960 Pisum sativum HOM05D003436 ORTHO05D003674 2.1e-19 99.8 151 49.7
Sabra16G0050300 Salix brachista HOM05D003436 ORTHO05D003674 2.1e-19 99.8 176 48.3
Sed0019071 Sechium edule HOM05D003436 ORTHO05D003674 8.1e-19 97.8 153 46.4
vmacro07911 Vaccinium macrocarpon HOM05D003436 ORTHO05D003674 8.1e-19 97.8 165 44.8
AL6G16870 Arabidopsis lyrata HOM05D003436 ORTHO05D003674 1.4e-18 97.1 158 44.9
TPR.G27779 Trifolium pratense HOM05D003436 ORTHO05D003674 1.4e-18 97.1 141 47.5
Lalb_Chr15g0078981 Lupinus albus HOM05D003436 ORTHO05D003674 1.8e-18 96.7 165 44.8
Cfa020171 Carpinus fangiana HOM05D003436 ORTHO05D003674 5.2e-18 95.1 143 46.9
QL07p023622 Quercus lobata HOM05D003436 ORTHO05D003674 8.9e-18 94.4 91 63.7
CDE06G2670 Ceratophyllum demersum HOM05D003436 ORTHO05D003674 1.2e-17 94.0 113 53.1
Medtr7g093140 Medicago truncatula HOM05D003436 ORTHO05D003674 1.2e-17 94.0 93 62.4
CAN.G1161.31 Capsicum annuum HOM05D003436 ORTHO05D003674 1.5e-17 93.6 103 54.4
Medtr7g093160 Medicago truncatula HOM05D003436 ORTHO05D003674 1.5e-17 93.6 95 60.0
Nitab4.5_0002343g0050 Nicotiana tabacum HOM05D003436 ORTHO05D003674 4.4e-17 92.0 156 44.2
Sp6g36090 Schrenkiella parvula HOM05D003436 ORTHO05D003674 4.4e-17 92.0 160 43.8
arahy.Tifrunner.gnm1.ann1.95S5ZX Arachis hypogaea HOM05D003436 ORTHO05D003674 5.8e-17 91.7 127 50.4
Sopen10g029400 Solanum pennellii HOM05D003436 ORTHO05D003674 7.6e-17 91.3 92 57.6
TPR.G27745 Trifolium pratense HOM05D003436 ORTHO05D003674 1.3e-16 90.5 91 62.6
Rhsim03G0006300 Rhododendron simsii HOM05D003436 ORTHO05D003674 1.7e-16 90.1 161 46.6
HanXRQChr10g0300671 Helianthus annuus HOM05D003436 ORTHO05D003674 2.9e-16 89.4 101 55.4
arahy.Tifrunner.gnm1.ann1.00VVAL Arachis hypogaea HOM05D003436 ORTHO05D003674 3.8e-16 89.0 127 49.6
Hma1.2p1_0386F.1_g141820 Hydrangea macrophylla HOM05D003436 ORTHO05D003674 3.8e-16 89.0 164 43.9
Solyc10g078780.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 3.8e-16 89.0 92 56.5
Haze_19983 Corylus avellana HOM05D003436 ORTHO05D003674 1.9e-15 86.7 140 45.7
Nitab4.5_0000105g0110 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.9e-15 86.7 156 42.9
ClCG10G017480 Citrullus lanatus HOM05D003436 ORTHO05D003674 2.4e-15 86.3 85 57.6
PGSC0003DMG400011439 Solanum tuberosum HOM05D003436 ORTHO05D003674 2.4e-15 86.3 104 51.0
Glyma.09G112100 Glycine max HOM05D003436 ORTHO05D003674 7.1e-15 84.7 78 65.4
Peaxi162Scf00003g04337 Petunia axillaris HOM05D003436 ORTHO05D003674 7.1e-15 84.7 153 43.1
vmacro07912 Vaccinium macrocarpon HOM05D003436 ORTHO05D003674 9.2e-15 84.3 164 40.9
CsaV3_3G038880 Cucumis sativus L. HOM05D003436 ORTHO05D003674 2.1e-14 83.2 85 55.3
PSO017G1578 Papaver somniferum HOM05D003436 ORTHO05D003674 2.7e-14 82.8 63 68.3
VMungo1383G0066 Vigna mungo HOM05D003436 ORTHO05D003674 2.7e-14 82.8 113 48.7
MELO3C009631.2 Cucumis melo HOM05D003436 ORTHO05D003674 3.5e-14 82.4 79 57.0
Psat0s797g0240 Pisum sativum HOM05D003436 ORTHO05D003674 3.5e-14 82.4 101 51.5
CAN.G1161.29 Capsicum annuum HOM05D003436 ORTHO05D003674 4.6e-14 82.0 148 43.9
Psat0s797g0160 Pisum sativum HOM05D003436 ORTHO05D003674 7.8e-14 81.3 101 52.5
TWI77G0090 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 7.8e-14 81.3 82 61.0
GSVIVG01033505001 Vitis vinifera HOM05D003436 ORTHO05D003674 7.8e-14 81.3 155 45.8
GSVIVG01033503001 Vitis vinifera HOM05D003436 ORTHO05D003674 1.3e-13 80.5 97 52.6
Carub.0006s0565 Capsella rubella HOM05D003436 ORTHO05D003674 1.7e-13 80.1 147 42.2
PSO170G2585 Papaver somniferum HOM05D003436 ORTHO05D003674 1.7e-13 80.1 58 70.7
SalBow4G2804 Salvia bowleyana HOM05D003436 ORTHO05D003674 1.7e-13 80.1 100 51.0
VMungo0720G0768 Vigna mungo HOM05D003436 ORTHO05D003674 2.3e-13 79.7 157 43.3
Solyc03g058330.3 Solanum lycopersicum HOM05D003436 ORTHO05D003674 3.0e-13 79.3 149 42.3
Sopen03g011930 Solanum pennellii HOM05D003436 ORTHO05D003674 3.0e-13 79.3 149 42.3
Atru.chr8.1096 Acer truncatum HOM05D003436 ORTHO05D003674 3.9e-13 79.0 99 52.5
PGSC0003DMG400011437 Solanum tuberosum HOM05D003436 ORTHO05D003674 3.9e-13 79.0 94 54.3
Sc19g0007030 Simmondsia chinensis HOM05D003436 ORTHO05D003674 5.1e-13 78.6 93 51.6
Haze_19981 Corylus avellana HOM05D003436 ORTHO05D003674 8.7e-13 77.8 130 43.8
Ca_05483_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 1.1e-12 77.4 103 52.4
Rhsim03G0006400 Rhododendron simsii HOM05D003436 ORTHO05D003674 1.1e-12 77.4 157 41.4
Oeu034263.1 Olea europaea HOM05D008970 ORTHO05D003674 1.5e-12 77.0 128 47.7
Lsat_1_v5_gn_9_26540 Lactuca sativa HOM05D003436 ORTHO05D003674 4.3e-12 75.5 100 53.0
Aqoxy2G03681 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 7.3e-12 74.7 59 71.2
Aqoxy7G02037 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 7.3e-12 74.7 59 71.2
Nn7g36015 Nelumbo nucifera HOM05D003436 ORTHO05D003674 7.3e-12 74.7 110 46.4
EL10Ac3g06923 Beta vulgaris HOM05D003436 ORTHO05D003674 9.6e-12 74.3 179 38.5
Nitab4.5_0008334g0040 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.6e-11 73.6 82 57.3
ECA236G0537 Erigeron canadensis HOM05D003436 ORTHO05D003674 3.6e-11 72.4 98 49.0
Sed0013894 Sechium edule HOM05D003436 ORTHO05D003674 8.1e-11 71.2 97 50.5
SalBow1G8531 Salvia bowleyana HOM05D003436 ORTHO05D003674 1.1e-10 70.9 62 61.3
Sopen10g029380 Solanum pennellii HOM05D003436 ORTHO05D003674 1.8e-10 70.1 88 46.6
Actinidia22033 Actinidia chinensis HOM05D003436 ORTHO05D003674 3.1e-10 69.3 155 42.6
Lsat_1_v5_gn_8_75321 Lactuca sativa HOM05D003436 ORTHO05D003674 3.1e-10 69.3 84 54.8
Phvul.007G259400 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 3.1e-10 69.3 146 41.1
Aqoxy3G02738 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 4.0e-10 68.9 52 73.1
ECA247G3621 Erigeron canadensis HOM05D003436 ORTHO05D003674 6.9e-10 68.2 100 48.0
Solyc10g078760.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 6.9e-10 68.2 88 45.5
Nitab4.5_0000324g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 2.6e-09 66.2 64 59.4
PGSC0003DMG400011438 Solanum tuberosum HOM05D003436 ORTHO05D003674 5.8e-09 65.1 101 48.5
unitig_899.g15079 Utricularia gibba HOM05D003436 ORTHO05D003674 5.8e-09 65.1 91 46.2
CAN.G1161.30 Capsicum annuum HOM05D003436 ORTHO05D003674 7.6e-09 64.7 77 51.9
unitig_736.g22300 Utricularia gibba HOM05D000267 ORTHO05D000298 7.6e-09 64.7 90 45.6
Cfa020173 Carpinus fangiana HOM05D003436 ORTHO05D003674 2.9e-08 62.8 101 47.5
vmacro23395 Vaccinium macrocarpon HOM05D003436 ORTHO05D003674 3.8e-08 62.4 77 46.8
Nitab4.5_0000105g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 6.4e-08 61.6 82 50.0
Nitab4.5_0001538g0010 Nicotiana tabacum HOM05D003436 ORTHO05D003674 6.4e-08 61.6 97 47.4
DCAR_019788 Daucus carota HOM05D003436 ORTHO05D003674 8.4e-08 61.2 110 42.7
Cc06_g15970 Coffea canephora HOM05D003436 ORTHO05D003674 1.1e-07 60.8 166 41.0
PGR142G2110 Punica granatum HOM05D003436 ORTHO05D003674 1.1e-07 60.8 106 41.5
Nitab4.5_0000105g0080 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.4e-07 60.5 82 50.0
CSS0008876 Camellia sinensis var. sinensis HOM05D003436 ORTHO05D003674 3.2e-07 59.3 110 43.6
Zm00001eb414650 Zea mays HOM05D003436 ORTHO05D003674 4.2e-07 58.9 170 37.6
Solyc10g078770.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 5.4e-07 58.5 78 48.7
Sopen10g029390 Solanum pennellii HOM05D003436 ORTHO05D003674 5.4e-07 58.5 78 48.7
Cfa020175 Carpinus fangiana HOM05D003436 ORTHO05D003674 9.3e-07 57.8 111 44.1
Zm00001eb308610 Zea mays HOM05D003436 ORTHO05D003674 9.3e-07 57.8 126 37.3
Actinidia32390 Actinidia chinensis HOM05D003436 ORTHO05D003674 2.1e-06 56.6 142 38.0
BolC3t12872H Brassica oleracea HOM05D003436 ORTHO05D003674 2.1e-06 56.6 98 42.9
Manes.09G034800 Manihot esculenta HOM05D003436 ORTHO05D003674 2.1e-06 56.6 90 46.7
Actinidia32389 Actinidia chinensis HOM05D003436 ORTHO05D003674 2.7e-06 56.2 155 39.4
Os08g0327700 Oryza sativa ssp. japonica HOM05D003436 ORTHO05D003674 2.7e-06 56.2 165 31.5
Nitab4.5_0000105g0090 Nicotiana tabacum HOM05D003436 ORTHO05D003674 4.6e-06 55.5 125 36.0
Peaxi162Scf00003g04336 Petunia axillaris HOM05D003436 ORTHO05D003674 4.6e-06 55.5 82 47.6
Atru.chr8.1104 Acer truncatum HOM05D003436 ORTHO05D003674 7.8e-06 54.7 108 40.7
PGR142G0291 Punica granatum HOM05D003436 ORTHO05D003674 7.8e-06 54.7 171 34.5


User provided reference genes

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