Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 3.8e-106 388.3 209 100.0
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 3.4e-38 162.5 120 70.0
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 3.5e-35 152.5 185 48.6
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 4.5e-30 135.6 108 60.2
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 1.8e-26 123.6 186 39.2
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 3.0e-26 122.9 186 39.2
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 3.9e-26 122.5 178 38.8
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 1.1e-25 120.9 128 50.0
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 3.7e-24 115.9 123 48.0
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 6.2e-24 115.2 123 48.0
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 4.0e-23 112.5 99 57.6
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 5.3e-23 112.1 194 33.5
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 1.2e-22 110.9 104 51.9
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 1.5e-22 110.5 121 51.2
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 2.6e-22 109.8 156 43.6
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 4.5e-22 109.0 190 36.3
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 4.5e-22 109.0 191 31.9
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 5.8e-22 108.6 191 31.9
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 1.0e-21 107.8 123 43.1
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 1.0e-21 107.8 97 54.6
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 1.3e-21 107.5 118 46.6
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 2.2e-21 106.7 109 48.6
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 2.9e-21 106.3 139 42.4
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 4.9e-21 105.5 97 53.6
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 8.4e-21 104.8 130 41.5
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 8.4e-21 104.8 130 41.5
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.1e-20 104.4 172 36.0
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 1.4e-20 104.0 127 41.7
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 1.4e-20 104.0 188 35.6
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 1.9e-20 103.6 128 42.2
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 1.9e-20 103.6 128 42.2
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 1.9e-20 103.6 128 42.2
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 3.2e-20 102.8 125 41.6
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 3.2e-20 102.8 172 36.0
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 3.2e-20 102.8 137 40.1
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 4.2e-20 102.4 105 47.6
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 4.2e-20 102.4 151 39.7
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 5.5e-20 102.1 172 35.5
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 5.5e-20 102.1 125 39.2
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 7.1e-20 101.7 114 47.4
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 9.3e-20 101.3 128 41.4
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 1.6e-19 100.5 199 33.7
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 2.1e-19 100.1 101 50.5
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 2.7e-19 99.8 137 41.6
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 3.5e-19 99.4 124 41.1
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 4.6e-19 99.0 169 34.9
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 4.6e-19 99.0 164 38.4
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 4.6e-19 99.0 121 44.6
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 6.0e-19 98.6 110 44.5
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 6.0e-19 98.6 110 44.5
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 6.0e-19 98.6 111 47.7
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 6.0e-19 98.6 118 41.5
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 7.9e-19 98.2 126 42.9
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 7.9e-19 98.2 126 42.9
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 1.0e-18 97.8 148 37.2
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 1.0e-18 97.8 123 42.3
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 1.3e-18 97.4 136 39.0
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 1.8e-18 97.1 107 43.9
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 1.8e-18 97.1 113 45.1
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 1.8e-18 97.1 102 46.1
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 1.8e-18 97.1 121 46.3
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 1.8e-18 97.1 133 41.4
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 2.3e-18 96.7 99 47.5
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 2.3e-18 96.7 105 45.7
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 3.0e-18 96.3 93 47.3
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 3.9e-18 95.9 106 44.3
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 5.1e-18 95.5 128 40.6
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 1.1e-17 94.4 93 49.5
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 1.5e-17 94.0 96 49.0
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 1.9e-17 93.6 200 33.0
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 2.5e-17 93.2 134 41.8
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 2.5e-17 93.2 143 37.8
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 4.3e-17 92.4 109 42.2
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 5.7e-17 92.0 90 46.7
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 7.4e-17 91.7 127 40.9
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 7.4e-17 91.7 194 33.0
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 7.4e-17 91.7 135 37.0
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 9.6e-17 91.3 96 49.0
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 1.6e-16 90.5 120 40.8
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 2.1e-16 90.1 122 44.3
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 3.7e-16 89.4 97 49.5
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 3.7e-16 89.4 131 41.2
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 6.2e-16 88.6 118 39.0
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 6.2e-16 88.6 106 42.5
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 1.1e-15 87.8 121 42.1
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 1.4e-15 87.4 112 44.6
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 3.1e-15 86.3 81 49.4
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 9.0e-15 84.7 108 43.5
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 2.2e-13 80.1 82 48.8
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 3.8e-13 79.3 109 36.7
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 1.4e-12 77.4 102 43.1
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 3.2e-12 76.3 109 36.7
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 7.1e-12 75.1 109 36.7
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 3.5e-11 72.8 96 40.6
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 1.0e-10 71.2 113 37.2
TAR633G1834 Trochodendron aralioides HOM05D007411 ORTHO05D009025 2.3e-10 70.1 84 41.7
CiPaw.16G085700 Carya illinoinensis HOM05D001204 ORTHO05D009253 1.1e-09 67.8 113 38.9
TAR633G0575 Trochodendron aralioides HOM05D007411 ORTHO05D009025 5.7e-09 65.5 81 39.5
CiPaw.06G152200 Carya illinoinensis HOM05D000489 ORTHO05D000372 6.3e-08 62.0 121 30.6
SEGI_16230 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 1.4e-07 60.8 114 32.5
SEGI_32233 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 1.8e-07 60.5 113 33.6
COL.COLO4_04671 Corchorus olitorius HOM05D001204 ORTHO05D009253 4.1e-07 59.3 116 30.2
Lalb_Chr22g0353021 Lupinus albus HOM05D001204 ORTHO05D009253 4.1e-07 59.3 133 29.3
Thecc.03G033700 Theobroma cacao HOM05D001204 ORTHO05D009253 4.1e-07 59.3 119 31.1
CARHR019030 Cardamine hirsuta HOM05D001204 ORTHO05D009253 1.2e-06 57.8 141 30.5
Gohir.A08G094548 Gossypium hirsutum HOM05D001204 ORTHO05D009253 3.4e-06 56.2 123 29.3
Gohir.D08G106000 Gossypium hirsutum HOM05D001204 ORTHO05D009253 4.5e-06 55.8 119 29.4
Zm00001eb408970 Zea mays HOM05D032292 ORTHO05D009025 4.5e-06 55.8 119 34.5
PSO724G0575 Papaver somniferum HOM05D007411 ORTHO05D009025 5.9e-06 55.5 75 36.0
Atru.chr6.1127 Acer truncatum HOM05D000489 ORTHO05D000372 7.7e-06 55.1 143 30.8


User provided reference genes

Program Settings