Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 4.4e-95 351.3 178 100.0
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 1.3e-51 206.8 144 75.7
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 1.5e-50 203.4 145 74.5
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 7.6e-47 191.0 154 69.5
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 3.2e-37 159.1 145 64.8
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 3.2e-37 159.1 148 60.8
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 9.3e-37 157.5 147 63.3
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 1.2e-36 157.1 151 62.9
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 1.6e-36 156.8 178 54.5
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 2.7e-36 156.0 151 60.9
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 4.6e-36 155.2 86 88.4
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 7.9e-36 154.5 178 53.9
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.0e-35 154.1 179 53.1
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.8e-35 153.3 152 59.2
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 2.3e-35 152.9 99 74.7
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 3.0e-35 152.5 98 77.6
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 5.1e-35 151.8 94 78.7
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 5.1e-35 151.8 134 62.7
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 8.7e-35 151.0 142 59.2
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 8.7e-35 151.0 84 86.9
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 1.1e-34 150.6 98 75.5
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 1.1e-34 150.6 98 75.5
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 2.5e-34 149.4 98 75.5
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 3.3e-34 149.1 91 79.1
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 4.3e-34 148.7 146 61.0
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 7.4e-34 147.9 94 76.6
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 7.4e-34 147.9 94 76.6
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 7.4e-34 147.9 148 59.5
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 9.7e-34 147.5 88 80.7
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 9.7e-34 147.5 141 58.2
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 9.7e-34 147.5 142 59.2
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 9.7e-34 147.5 90 78.9
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 1.3e-33 147.1 145 58.6
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 1.6e-33 146.7 109 68.8
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 2.2e-33 146.4 88 79.5
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 2.8e-33 146.0 104 72.1
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 2.8e-33 146.0 102 71.6
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 2.8e-33 146.0 96 76.0
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 3.7e-33 145.6 136 55.9
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 6.3e-33 144.8 137 56.9
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 6.3e-33 144.8 95 73.7
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 6.3e-33 144.8 88 79.5
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 6.3e-33 144.8 95 73.7
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 6.3e-33 144.8 88 78.4
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 6.3e-33 144.8 95 73.7
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 6.3e-33 144.8 95 73.7
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 8.2e-33 144.4 141 57.4
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 8.2e-33 144.4 130 59.2
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 8.2e-33 144.4 90 77.8
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 8.2e-33 144.4 91 75.8
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.1e-32 144.1 146 56.2
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 1.1e-32 144.1 141 56.7
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 1.4e-32 143.7 83 83.1
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 1.4e-32 143.7 83 83.1
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 1.4e-32 143.7 92 76.1
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 1.4e-32 143.7 97 73.2
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 1.8e-32 143.3 102 71.6
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 1.8e-32 143.3 92 77.2
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 1.8e-32 143.3 98 70.4
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 2.4e-32 142.9 124 63.7
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 2.4e-32 142.9 90 74.4
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 5.3e-32 141.7 94 72.3
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 5.3e-32 141.7 91 74.7
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 6.9e-32 141.4 91 73.6
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 6.9e-32 141.4 141 55.3
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 6.9e-32 141.4 84 81.0
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 6.9e-32 141.4 135 57.8
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 9.0e-32 141.0 94 72.3
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 1.2e-31 140.6 107 67.3
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 1.5e-31 140.2 114 63.2
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 1.5e-31 140.2 114 64.0
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 2.0e-31 139.8 147 56.5
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 2.0e-31 139.8 135 56.3
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 2.6e-31 139.4 123 61.0
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 2.6e-31 139.4 143 54.5
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 2.6e-31 139.4 143 54.5
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 2.6e-31 139.4 136 59.6
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.4e-31 139.0 147 56.5
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 3.4e-31 139.0 93 74.2
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 1.0e-30 137.5 146 54.8
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 1.3e-30 137.1 192 45.8
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 1.7e-30 136.7 144 56.9
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 2.9e-30 136.0 98 70.4
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 8.5e-30 134.4 122 54.9
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 1.1e-29 134.0 95 70.5
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 1.9e-29 133.3 111 62.2
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 1.9e-29 133.3 82 79.3
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 3.2e-29 132.5 80 81.2
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 4.2e-29 132.1 80 80.0
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 4.2e-29 132.1 83 78.3
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 1.2e-28 130.6 74 87.8
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 8.8e-27 124.4 73 79.5
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.5e-26 123.6 147 53.7
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 7.4e-26 121.3 71 84.5
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 1.8e-24 116.7 80 67.5
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 4.1e-24 115.5 93 63.4
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 1.7e-22 110.2 145 49.0
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 6.5e-22 108.2 76 64.5
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 6.1e-20 101.7 76 63.2
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 1.5e-18 97.1 75 62.7
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 1.5e-18 97.1 78 59.0
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.1e-16 89.4 51 80.4
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 9.1e-16 87.8 118 48.3
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 1.3e-14 84.0 65 70.8
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 1.4e-11 73.9 56 69.6


User provided reference genes

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