Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 8.5e-165 583.6 286 100.0
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 7.7e-150 533.9 284 90.8
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 4.4e-145 518.1 281 89.0
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 4.2e-132 474.9 286 79.7
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.7e-131 471.5 286 79.4
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.7e-131 471.5 286 79.4
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 8.0e-131 470.7 286 79.4
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 1.0e-130 470.3 282 79.4
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 4.4e-129 464.9 286 77.6
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 5.7e-129 464.5 286 79.4
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 7.5e-129 464.2 286 77.6
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 2.8e-128 462.2 286 77.3
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 8.3e-128 460.7 286 75.9
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 1.4e-127 459.9 286 77.3
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 1.4e-127 459.9 273 80.2
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 1.8e-127 459.5 283 77.7
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 1.2e-126 456.8 282 77.0
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.0e-126 456.1 286 76.2
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 2.7e-126 455.7 279 76.3
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 3.5e-126 455.3 286 75.5
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.3e-125 453.4 279 76.0
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 2.9e-125 452.2 283 75.3
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 3.8e-125 451.8 286 74.8
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 5.0e-125 451.4 283 76.7
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 5.0e-125 451.4 283 75.3
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 6.6e-125 451.1 279 74.9
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 6.6e-125 451.1 284 73.9
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 8.6e-125 450.7 286 75.2
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 8.6e-125 450.7 289 74.0
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 8.6e-125 450.7 286 75.5
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 1.1e-124 450.3 280 75.7
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.9e-124 449.5 283 74.9
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 2.5e-124 449.1 279 75.6
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 2.5e-124 449.1 281 75.4
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 2.5e-124 449.1 281 75.8
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 3.3e-124 448.7 285 75.4
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 9.5e-124 447.2 280 75.4
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 1.6e-123 446.4 282 73.8
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 4.7e-123 444.9 281 75.4
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 8.0e-123 444.1 282 73.4
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 1.0e-122 443.7 285 74.0
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 1.8e-122 443.0 286 73.1
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 4.0e-122 441.8 296 72.0
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 4.0e-122 441.8 279 74.2
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 4.0e-122 441.8 311 71.4
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 5.2e-122 441.4 282 74.5
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 8.9e-122 440.7 280 74.3
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 8.9e-122 440.7 282 72.7
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.2e-121 440.3 286 71.0
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 2.6e-121 439.1 285 73.3
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 5.7e-121 438.0 277 76.2
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 9.8e-121 437.2 286 74.1
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 9.8e-121 437.2 286 73.8
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.7e-120 436.4 282 74.5
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.7e-120 436.4 282 74.5
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.7e-120 436.4 282 74.5
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 4.9e-120 434.9 282 70.2
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 1.1e-119 433.7 270 75.9
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.1e-119 433.7 284 73.2
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 1.4e-119 433.3 285 68.8
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 1.4e-119 433.3 282 72.0
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 3.2e-119 432.2 278 73.4
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 4.1e-119 431.8 287 70.4
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 4.1e-119 431.8 287 70.4
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 4.1e-119 431.8 286 69.2
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 5.4e-119 431.4 280 72.5
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 7.0e-119 431.0 287 70.7
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 1.2e-118 430.3 270 75.2
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 1.2e-118 430.3 270 75.2
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 2.0e-118 429.5 273 75.1
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 2.0e-118 429.5 284 73.2
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 4.6e-118 428.3 280 71.4
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 1.0e-117 427.2 284 73.6
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.3e-117 426.8 287 70.0
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 8.6e-117 424.1 286 68.9
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 1.1e-116 423.7 286 68.9
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 4.3e-116 421.8 281 70.1
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.6e-115 419.9 281 70.1
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 4.7e-115 418.3 272 72.4
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 8.0e-115 417.5 286 68.5
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 1.0e-114 417.2 271 72.3
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 1.0e-114 417.2 326 62.9
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 1.4e-114 416.8 286 68.5
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 5.2e-114 414.8 285 67.4
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 2.0e-113 412.9 289 66.8
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.7e-112 409.8 283 69.3
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 1.1e-111 407.1 285 67.0
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 6.6e-109 397.9 282 64.2
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 2.5e-108 396.0 269 69.5
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 4.3e-108 395.2 263 71.1
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 2.6e-105 386.0 284 64.4
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 9.8e-105 384.0 241 75.5
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 3.7e-104 382.1 280 66.1
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 1.0e-101 374.0 280 65.0
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 5.1e-101 371.7 269 64.3
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 2.3e-98 362.8 242 68.6
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 5.2e-98 361.7 239 73.6
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.3e-93 346.3 211 78.2
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 3.1e-82 309.3 275 55.6
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 9.9e-73 277.7 176 75.0
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 2.4e-71 273.1 261 49.8
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 3.9e-69 265.8 260 50.8
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 9.3e-63 244.6 254 46.9
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 5.1e-61 238.8 259 45.6
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 7.2e-47 191.8 108 86.1
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.0e-45 188.0 164 57.9
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 1.1e-42 177.9 254 39.4
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 6.9e-42 175.3 305 40.0
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 4.7e-38 162.5 106 71.7
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 2.6e-36 156.8 195 45.1
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 7.0e-34 148.7 98 68.4
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 4.5e-33 146.0 134 56.7
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.7e-30 136.7 95 67.4
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 6.1e-30 135.6 88 71.6
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 8.8e-29 131.7 75 84.0
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 9.8e-20 101.7 74 66.2
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 9.8e-20 101.7 66 69.7
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 2.7e-09 67.0 42 71.4


User provided reference genes

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