Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 1.9e-82 309.3 178 100.0
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 1.4e-21 107.1 153 57.5
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 1.6e-20 103.6 149 49.7
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 6.3e-17 91.7 152 48.7
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 5.3e-16 88.6 148 42.6
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 5.9e-15 85.1 148 42.6
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 1.0e-14 84.3 149 43.0
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 1.7e-14 83.6 151 49.0
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 2.2e-14 83.2 152 46.1
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 5.0e-14 82.0 118 54.2
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 1.1e-13 80.9 155 48.4
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 1.4e-13 80.5 154 48.1
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 1.4e-13 80.5 96 53.1
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 1.9e-13 80.1 155 48.4
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 3.2e-13 79.3 155 48.4
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 7.2e-13 78.2 145 42.1
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 1.2e-12 77.4 107 52.3
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 2.3e-11 73.2 133 42.1
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 2.0e-10 70.1 102 44.1
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 2.6e-10 69.7 141 46.8
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 2.6e-10 69.7 110 44.5
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 4.4e-10 68.9 100 49.0
Manes.08G066600 Manihot esculenta HOM05D005060 ORTHO05D005975 9.7e-10 67.8 151 41.7
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 1.3e-09 67.4 149 38.9
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 2.2e-09 66.6 143 48.3
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 2.2e-09 66.6 112 44.6
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 3.7e-09 65.9 130 41.5
Gohir.A13G001200 Gossypium hirsutum HOM05D005060 ORTHO05D005975 4.8e-09 65.5 74 58.1
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 6.3e-09 65.1 146 37.7
SGA_v2.0_scaffold66G22311 Striga asiatica HOM05D005060 ORTHO05D005975 6.3e-09 65.1 96 43.8
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 8.2e-09 64.7 152 42.1
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 8.2e-09 64.7 133 41.4
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 1.1e-08 64.3 142 41.5
Psat0s2745g0280 Pisum sativum HOM05D005060 ORTHO05D005975 1.4e-08 63.9 96 46.9
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 1.8e-08 63.5 152 40.1
AT3G56910 Arabidopsis thaliana HOM05D005060 ORTHO05D005975 2.4e-08 63.2 138 39.9
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 2.4e-08 63.2 114 38.6
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 2.4e-08 63.2 155 45.2
Lalb_Chr22g0358011 Lupinus albus HOM05D005060 ORTHO05D005975 2.4e-08 63.2 156 37.2
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 2.4e-08 63.2 151 44.4
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 4.1e-08 62.4 95 54.7
Lalb_Chr14g0365381 Lupinus albus HOM05D005060 ORTHO05D005975 4.1e-08 62.4 101 46.5
VMungo1383G0657 Vigna mungo HOM05D005060 ORTHO05D005975 5.3e-08 62.0 131 39.7
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 9.1e-08 61.2 153 42.5
Os01g0278900 Oryza sativa ssp. japonica HOM05D005060 ORTHO05D005975 9.1e-08 61.2 89 49.4
BcaC08g44810 Brassica carinata HOM05D005060 ORTHO05D005975 1.6e-07 60.5 125 38.4
Glyma.19G124900 Glycine max HOM05D005060 ORTHO05D005975 1.6e-07 60.5 103 44.7
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 1.6e-07 60.5 108 42.6
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 1.6e-07 60.5 154 39.0
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 2.0e-07 60.1 114 37.7
Actinidia05489 Actinidia chinensis HOM05D005060 ORTHO05D005975 4.5e-07 58.9 34 91.2
Gohir.A01G192800 Gossypium hirsutum HOM05D005060 ORTHO05D005975 4.5e-07 58.9 103 46.6
arahy.Tifrunner.gnm1.ann1.U3TF2Z Arachis hypogaea HOM05D005060 ORTHO05D005975 5.9e-07 58.5 60 60.0
Gohir.D01G177000 Gossypium hirsutum HOM05D005060 ORTHO05D005975 5.9e-07 58.5 154 40.3
Gorai.002G226200 Gossypium raimondii HOM05D005060 ORTHO05D005975 5.9e-07 58.5 154 40.3
Ah.04g150220 Amaranthus hybridus HOM05D005060 ORTHO05D005975 1.0e-06 57.8 95 50.5
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 1.0e-06 57.8 108 41.7
SGA_v2.0_scaffold69G23194 Striga asiatica HOM05D005060 ORTHO05D005975 1.0e-06 57.8 108 46.3
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 1.3e-06 57.4 154 41.6
unitig_744.g24164 Utricularia gibba HOM05D003084 ORTHO05D003580 1.3e-06 57.4 90 46.7
Peaxi162Scf00153g01321 Petunia axillaris HOM05D005060 ORTHO05D005975 2.9e-06 56.2 153 44.4
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 2.9e-06 56.2 107 48.6
TPR.G27972 Trifolium pratense HOM05D005060 ORTHO05D005975 3.8e-06 55.8 141 38.3
MSTRG.6293 Avicennia marina HOM05D005060 ORTHO05D005975 5.0e-06 55.5 158 39.9
FAN06G1820 Fragaria x ananassa HOM05D002241 ORTHO05D002458 5.0e-06 55.5 107 45.8
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 5.0e-06 55.5 97 41.2
FAN03G0591 Fragaria x ananassa HOM05D005060 ORTHO05D005975 6.5e-06 55.1 140 37.1
Hma1.2p1_0031F.1_g018400 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 6.5e-06 55.1 140 45.0
Hma1.2p1_2089F.1_g313840 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 6.5e-06 55.1 140 45.0
MBI19_g25016_MAGBIO Magnolia biondii HOM05D005060 ORTHO05D005975 6.5e-06 55.1 118 45.8
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 6.5e-06 55.1 126 33.3


User provided reference genes

Program Settings