Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0129341 Helianthus annuus HOM05D005610 ORTHO05D006181 6.0e-115 417.5 213 100.0
ECA238G1057 Erigeron canadensis HOM05D005610 ORTHO05D006181 2.6e-54 216.1 116 87.1
Dinv13959 Davidia involucrata HOM05D005610 ORTHO05D006181 6.7e-50 201.4 116 81.0
Sopen04g006810 Solanum pennellii HOM05D005610 ORTHO05D006181 1.7e-48 196.8 116 77.6
ClCG07G002910 Citrullus lanatus HOM05D005610 ORTHO05D006181 3.7e-48 195.7 114 78.9
Peaxi162Scf00442g00523 Petunia axillaris HOM05D005610 ORTHO05D006181 6.3e-48 194.9 114 78.9
GSVIVG01008189001 Vitis vinifera HOM05D005610 ORTHO05D006181 6.3e-48 194.9 116 76.7
Nitab4.5_0001701g0220 Nicotiana tabacum HOM05D005610 ORTHO05D006181 1.1e-47 194.1 114 78.1
Solyc04g014700.4 Solanum lycopersicum HOM05D005610 ORTHO05D006181 1.1e-47 194.1 114 77.2
Prupe.8G115200 Prunus persica HOM05D005610 ORTHO05D006181 1.4e-47 193.7 116 76.7
PGSC0003DMG400023560 Solanum tuberosum HOM05D005610 ORTHO05D006181 1.4e-47 193.7 114 77.2
CAN.G1263.12 Capsicum annuum HOM05D005610 ORTHO05D006181 1.8e-47 193.4 114 78.1
Nitab4.5_0008006g0060 Nicotiana tabacum HOM05D005610 ORTHO05D006181 1.8e-47 193.4 114 78.1
Cpa.g.sc152.66 Carica papaya HOM05D005610 ORTHO05D006181 3.1e-47 192.6 112 76.8
QL10p003579 Quercus lobata HOM05D005610 ORTHO05D006181 3.1e-47 192.6 114 76.3
Nitab4.5_0018980g0020 Nicotiana tabacum HOM05D005610 ORTHO05D006181 4.1e-47 192.2 114 77.2
Actinidia26870 Actinidia chinensis HOM05D005610 ORTHO05D006181 5.3e-47 191.8 112 79.5
Cc00_g15270 Coffea canephora HOM05D005610 ORTHO05D006181 1.2e-46 190.7 116 77.6
Prupe.8G114900 Prunus persica HOM05D005610 ORTHO05D006181 1.2e-46 190.7 116 75.9
PGR142G4331 Punica granatum HOM05D005610 ORTHO05D006181 2.0e-46 189.9 116 76.7
Sed0027170 Sechium edule HOM05D005610 ORTHO05D006181 3.5e-46 189.1 113 77.0
vmacro03652 Vaccinium macrocarpon HOM05D005610 ORTHO05D006181 3.5e-46 189.1 118 75.4
CSS0047184 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 4.5e-46 188.7 116 76.7
ClCG01G011300 Citrullus lanatus HOM05D005610 ORTHO05D006181 4.5e-46 188.7 111 78.4
MD10G1088300 Malus domestica HOM05D005610 ORTHO05D006181 4.5e-46 188.7 116 74.1
Haze_06904 Corylus avellana HOM05D005610 ORTHO05D006181 7.7e-46 188.0 115 72.2
Nitab4.5_0001867g0090 Nicotiana tabacum HOM05D005610 ORTHO05D006181 7.7e-46 188.0 114 76.3
SalBow8G2682 Salvia bowleyana HOM05D005610 ORTHO05D006181 1.0e-45 187.6 114 76.3
TWI38G1154 Tripterygium wilfordii HOM05D005610 ORTHO05D006181 1.0e-45 187.6 128 70.3
TAR624G0514 Trochodendron aralioides HOM05D005610 ORTHO05D006181 1.0e-45 187.6 115 77.4
Aqoxy4G02780 Aquilegia oxysepala HOM05D005610 ORTHO05D006181 1.3e-45 187.2 111 79.3
Duzib235G0930 Durio zibethinus HOM05D005610 ORTHO05D006181 1.3e-45 187.2 115 76.5
Gohir.A06G152700 Gossypium hirsutum HOM05D005610 ORTHO05D006181 1.7e-45 186.8 115 75.7
MELO3C008876.2 Cucumis melo HOM05D005610 ORTHO05D006181 2.2e-45 186.4 111 77.5
Gorai.010G185800 Gossypium raimondii HOM05D005610 ORTHO05D006181 2.9e-45 186.0 115 76.5
CANSAT01G2220 Cannabis sativa HOM05D005610 ORTHO05D006181 3.8e-45 185.7 115 75.7
Thecc.06G231600 Theobroma cacao HOM05D005610 ORTHO05D006181 3.8e-45 185.7 111 76.6
CiPaw.10G076800 Carya illinoinensis HOM05D005610 ORTHO05D006181 5.0e-45 185.3 114 75.4
Migut.H01600 Erythranthe guttata HOM05D005610 ORTHO05D006181 5.0e-45 185.3 111 77.5
EL10Ac4g08756 Beta vulgaris HOM05D005610 ORTHO05D006181 6.5e-45 184.9 113 77.9
COL.COLO4_31865 Corchorus olitorius HOM05D005610 ORTHO05D006181 6.5e-45 184.9 111 76.6
CsaV3_4G031690 Cucumis sativus L. HOM05D005610 ORTHO05D006181 6.5e-45 184.9 111 77.5
RcHm_v2.0_Chr6g0259461 Rosa chinensis HOM05D005610 ORTHO05D006181 1.5e-44 183.7 116 73.3
FAN15G0825 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.9e-44 183.3 116 72.4
SGA_v2.0_scaffold7G03768 Striga asiatica HOM05D005610 ORTHO05D006181 2.5e-44 183.0 111 74.8
FvH4_2g07070 Fragaria vesca HOM05D005610 ORTHO05D006181 3.2e-44 182.6 116 72.4
Cc09_g00980 Coffea canephora HOM05D005610 ORTHO05D006181 5.5e-44 181.8 112 75.0
SGA_v2.0_scaffold4G01884 Striga asiatica HOM05D005610 ORTHO05D006181 7.2e-44 181.4 116 72.4
Thecc.10G134700 Theobroma cacao HOM05D005610 ORTHO05D006181 7.2e-44 181.4 111 73.9
Duzib160G0112 Durio zibethinus HOM05D005610 ORTHO05D006181 9.4e-44 181.0 115 73.9
PSO210G2880 Papaver somniferum HOM05D005610 ORTHO05D006181 9.4e-44 181.0 116 74.1
Atru.chr1.2482 Acer truncatum HOM05D005610 ORTHO05D006181 1.2e-43 180.6 112 73.2
Ciclev10017234m.g Citrus clementina HOM05D005610 ORTHO05D006181 1.6e-43 180.3 110 74.5
Thecc.10G135500 Theobroma cacao HOM05D005610 ORTHO05D006181 2.1e-43 179.9 111 73.0
Aa31LG5G10530 Aethionema arabicum HOM05D005610 ORTHO05D006181 4.7e-43 178.7 111 75.7
Hund25163 Selenicereus undatus HOM05D005610 ORTHO05D006181 4.7e-43 178.7 112 77.7
Oeu052223.1 Olea europaea HOM05D005610 ORTHO05D006181 6.1e-43 178.3 116 72.4
Lsat_1_v5_gn_7_13401 Lactuca sativa HOM05D005610 ORTHO05D006181 1.4e-42 177.2 125 68.8
Oeu054255.1 Olea europaea HOM05D005610 ORTHO05D006181 2.3e-42 176.4 116 72.4
PSO302G0046 Papaver somniferum HOM05D005610 ORTHO05D006181 2.3e-42 176.4 111 73.9
Ca_13393_v3 Cicer arietinum L. HOM05D005610 ORTHO05D006181 3.0e-42 176.0 114 71.9
MSTRG.13119 Avicennia marina HOM05D005610 ORTHO05D006181 5.2e-42 175.3 114 71.9
AUR62014294 Chenopodium quinoa HOM05D005610 ORTHO05D006181 5.2e-42 175.3 113 72.6
CARHR075530 Cardamine hirsuta HOM05D005610 ORTHO05D006181 6.8e-42 174.9 111 74.8
Eucgr.B02596 Eucalyptus grandis HOM05D005610 ORTHO05D006181 1.2e-41 174.1 112 72.3
Thhalv10022365m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 1.2e-41 174.1 116 69.0
Manes.16G001300 Manihot esculenta HOM05D005610 ORTHO05D006181 1.2e-41 174.1 112 72.3
Carub.0003s0067 Capsella rubella HOM05D005610 ORTHO05D006181 1.5e-41 173.7 111 73.0
AUR62034142 Chenopodium quinoa HOM05D005610 ORTHO05D006181 1.5e-41 173.7 108 74.1
Sp3g00630 Schrenkiella parvula HOM05D005610 ORTHO05D006181 2.0e-41 173.3 111 72.1
Phvul.004G117800 Phaseolus vulgaris HOM05D005610 ORTHO05D006181 2.6e-41 172.9 116 69.0
AL3G10740 Arabidopsis lyrata HOM05D005610 ORTHO05D006181 3.4e-41 172.6 111 73.0
BNapus_Darmor_BZH_scaffold_133p00040 Brassica napus HOM05D005610 ORTHO05D006181 3.4e-41 172.6 111 72.1
BraA01t04664Z Brassica rapa HOM05D005610 ORTHO05D006181 3.4e-41 172.6 111 72.1
AT3G01435 Arabidopsis thaliana HOM05D005610 ORTHO05D006181 4.4e-41 172.2 111 72.1
CDE04G2721 Ceratophyllum demersum HOM05D005610 ORTHO05D006181 4.4e-41 172.2 115 68.7
BcaC09g47662 Brassica carinata HOM05D005610 ORTHO05D006181 5.7e-41 171.8 111 71.2
unitig_748.g7924 Utricularia gibba HOM05D000772 ORTHO05D006181 5.7e-41 171.8 110 72.7
Glyma.19G169600 Glycine max HOM05D005610 ORTHO05D006181 7.5e-41 171.4 116 68.1
Nn8g38603 Nelumbo nucifera HOM05D005610 ORTHO05D006181 1.3e-40 170.6 114 71.9
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 2.2e-40 169.9 119 66.4
arahy.Tifrunner.gnm1.ann1.PD4MQY Arachis hypogaea HOM05D005610 ORTHO05D006181 2.2e-40 169.9 119 66.4
Glyma.03G168300 Glycine max HOM05D005610 ORTHO05D006181 2.8e-40 169.5 116 67.2
THA.LOC104822382 Tarenaya hassleriana HOM05D005610 ORTHO05D006181 3.7e-40 169.1 111 72.1
Lj4g0017663 Lotus japonicus HOM05D005610 ORTHO05D006181 4.8e-40 168.7 116 67.2
Lj5g0020791 Lotus japonicus HOM05D005610 ORTHO05D006181 4.8e-40 168.7 119 66.4
A05p44570 Brassica napus HOM05D005610 ORTHO05D006181 1.1e-39 167.5 111 70.3
BraA05t23199Z Brassica rapa HOM05D005610 ORTHO05D006181 1.1e-39 167.5 111 70.3
Medtr1g023330 Medicago truncatula HOM05D005610 ORTHO05D006181 1.8e-39 166.8 116 67.2
Medtr8g106470 Medicago truncatula HOM05D005610 ORTHO05D006181 5.4e-39 165.2 116 68.1
Sabra04G0000600 Salix brachista HOM05D005610 ORTHO05D006181 9.1e-39 164.5 115 67.8
Lalb_Chr04g0257231 Lupinus albus HOM05D005610 ORTHO05D006181 2.0e-38 163.3 112 68.8
Potri.004G001600 Populus trichocarpa HOM05D005610 ORTHO05D006181 2.0e-38 163.3 115 67.8
BolC5t35148H Brassica oleracea HOM05D005610 ORTHO05D006181 4.5e-38 162.2 111 67.6
BolC1t05956H Brassica oleracea HOM05D005610 ORTHO05D006181 1.0e-37 161.0 132 60.6
Thhalv10022907m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 1.3e-37 160.6 126 61.1
Zm00001eb234830 Zea mays HOM05D005610 ORTHO05D006181 2.9e-37 159.5 109 68.8
C09p75160 Brassica napus HOM05D005610 ORTHO05D006181 5.0e-37 158.7 111 66.7
ATR1153G018 Amborella trichopoda HOM05D005610 ORTHO05D006181 8.5e-37 157.9 110 65.5
Lj6g0026774 Lotus japonicus HOM05D005610 ORTHO05D006181 8.5e-37 157.9 112 63.4
VMungo0464G1641 Vigna mungo HOM05D005610 ORTHO05D006181 2.5e-36 156.4 140 56.4
Ah.06g187910 Amaranthus hybridus HOM05D005610 ORTHO05D006181 7.2e-36 154.8 96 74.0
ATR0723G088 Amborella trichopoda HOM05D005610 ORTHO05D006181 1.2e-35 154.1 110 64.5
Os02g0189100 Oryza sativa ssp. japonica HOM05D005610 ORTHO05D006181 7.5e-33 144.8 107 63.6
HPP92_003728 Vanilla planifolia HOM05D005610 ORTHO05D006181 4.9e-32 142.1 112 57.1
Zm00001eb206370 Zea mays HOM05D005610 ORTHO05D006181 4.9e-32 142.1 101 67.3
Gohir.D06G159100 Gossypium hirsutum HOM05D005610 ORTHO05D006181 1.8e-31 140.2 85 72.9
MBI19_g29445_MAGBIO Magnolia biondii HOM05D005610 ORTHO05D006181 1.8e-31 140.2 134 53.7
SEGI_23772 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 1.8e-31 140.2 107 63.6
CSS0025052 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 3.1e-31 139.4 86 72.1
HanXRQChr15g0470051 Helianthus annuus HOM05D005610 ORTHO05D006181 3.1e-31 139.4 88 73.9
TAR626G0207 Trochodendron aralioides HOM05D005610 ORTHO05D006181 4.1e-31 139.0 182 45.6
FAN24G2055 Fragaria x ananassa HOM05D005610 ORTHO05D006181 5.4e-31 138.7 86 69.8
Dinv29757 Davidia involucrata HOM05D005610 ORTHO05D006181 8.6e-29 131.3 81 79.0
Psat6g005240 Pisum sativum HOM05D005610 ORTHO05D006181 2.1e-27 126.7 84 73.8
Mapoly0014s0199 Marchantia polymorpha HOM05D005610 ORTHO05D006181 3.6e-27 125.9 106 55.7
Pp3c10_18150 Physcomitrium patens HOM05D005610 ORTHO05D006181 6.1e-27 125.2 105 56.2
Actinidia02323 Actinidia chinensis HOM05D005610 ORTHO05D006181 4.0e-26 122.5 67 83.6
SMO200G0153 Selaginella moellendorffii HOM05D005610 ORTHO05D006181 4.0e-26 122.5 112 50.0
BNapus_Darmor_BZH_scaffold_119p00050 Brassica napus HOM05D005610 ORTHO05D006181 1.7e-24 117.1 75 74.7
BNapus_Darmor_BZH_scaffold_97p00380 Brassica napus HOM05D005610 ORTHO05D006181 1.7e-24 117.1 75 74.7
Zm00001eb004040 Zea mays HOM05D005610 ORTHO05D006181 2.9e-24 116.3 72 70.8
FAN27G3428 Fragaria x ananassa HOM05D005610 ORTHO05D006181 6.4e-24 115.2 76 67.1
CBR_g27782 Chara braunii HOM05D005610 ORTHO05D001468 9.2e-23 111.3 110 52.7
Thecc.10G135300 Theobroma cacao HOM05D005610 ORTHO05D006181 9.2e-23 111.3 70 75.7
Eucgr.K02585 Eucalyptus grandis HOM05D005610 ORTHO05D006181 1.1e-20 104.4 70 71.4
FAN20G1916 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.2e-19 100.9 59 72.9
AagrBONN_evm.TU.Sc2ySwM_228.3334 Anthoceros agrestis HOM05D005610 ORTHO05D006181 4.7e-19 99.0 104 43.3
Rhsim13G0147700 Rhododendron simsii HOM05D005610 ORTHO05D006181 5.2e-18 95.5 61 75.4
Pp3c3_34050 Physcomitrium patens HOM05D005610 ORTHO05D006181 8.9e-18 94.7 78 60.3
TPR.G7342 Trifolium pratense HOM05D005610 ORTHO05D006181 2.4e-15 86.7 55 67.3
Sc16g0007910 Simmondsia chinensis HOM05D005610 ORTHO05D006181 6.0e-14 82.0 54 72.2
RcHm_v2.0_Chr7g0240711 Rosa chinensis HOM05D005610 ORTHO05D006181 1.1e-12 77.8 43 76.7
RcHm_v2.0_Chr7g0240721 Rosa chinensis HOM05D005610 ORTHO05D006181 2.3e-10 70.1 48 68.8
SEGI_27415 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 2.2e-08 63.5 58 53.4
Migut.M01383 Erythranthe guttata HOM05D005610 ORTHO05D006181 7.1e-07 58.5 58 48.3
CARHR125830 Cardamine hirsuta HOM05D005610 ORTHO05D006181 1.6e-06 57.4 38 65.8


User provided reference genes

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