Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0127361 Helianthus annuus HOM05D013023 ORTHO05D227252 8.0e-112 407.1 212 100.0
HanXRQChr04g0127301 Helianthus annuus HOM05D013023 ORTHO05D219700 1.6e-88 329.7 179 89.9
HanXRQChr04g0127341 Helianthus annuus HOM05D013023 ORTHO05D222451 1.7e-82 309.7 179 91.6
HanXRQChr16g0499581 Helianthus annuus HOM05D013023 ORTHO05D225105 4.6e-67 258.5 185 71.9
HanXRQChr04g0127321 Helianthus annuus HOM05D013023 ORTHO05D219833 2.3e-66 256.1 174 74.7
HanXRQChr04g0127141 Helianthus annuus HOM05D013023 ORTHO05D224213 6.2e-64 248.1 179 70.4
HanXRQChr04g0127271 Helianthus annuus HOM05D013023 ORTHO05D000515 3.8e-61 238.8 180 67.8
HanXRQChr16g0499711 Helianthus annuus HOM05D013023 ORTHO05D226073 1.1e-55 220.7 182 69.2
HanXRQChr10g0319181 Helianthus annuus HOM05D013023 ORTHO05D007045 1.4e-47 193.7 171 61.4
HanXRQChr10g0319211 Helianthus annuus HOM05D013023 ORTHO05D227658 1.4e-47 193.7 142 66.9
HanXRQChr04g0127201 Helianthus annuus HOM05D013023 ORTHO05D222573 4.1e-39 165.6 122 77.9
HanXRQChr13g0404121 Helianthus annuus HOM05D000687 ORTHO05D000515 1.0e-13 81.3 138 34.1
Lsat_1_v5_gn_2_101660 Lactuca sativa HOM05D000687 ORTHO05D000515 2.3e-10 70.1 174 28.7
HanXRQChr14g0453341 Helianthus annuus HOM05D000687 ORTHO05D000515 4.0e-10 69.3 146 30.8
ECA238G1047 Erigeron canadensis HOM05D000687 ORTHO05D000515 2.0e-09 67.0 147 27.9
Actinidia39361 Actinidia chinensis HOM05D000687 ORTHO05D000515 2.6e-09 66.6 176 26.7
FAN21G3570 Fragaria x ananassa HOM05D000687 ORTHO05D000515 2.6e-09 66.6 145 29.7
Ciclev10016930m.g Citrus clementina HOM05D000687 ORTHO05D000515 4.4e-09 65.9 131 32.1
HPP92_020683 Vanilla planifolia HOM05D000687 ORTHO05D000515 4.4e-09 65.9 98 36.7
SalBow6G5952 Salvia bowleyana HOM05D000687 ORTHO05D000515 5.7e-09 65.5 176 27.3
TWI60G1469 Tripterygium wilfordii HOM05D000687 ORTHO05D000515 7.5e-09 65.1 143 27.3
MD11G1011000 Malus domestica HOM05D000687 ORTHO05D000515 9.8e-09 64.7 120 30.8
Nitab4.5_0000254g0250 Nicotiana tabacum HOM05D000687 ORTHO05D000515 9.8e-09 64.7 129 28.7
PGR119G0386 Punica granatum HOM05D000687 ORTHO05D000515 9.8e-09 64.7 129 31.0
Dinv13433 Davidia involucrata HOM05D000687 ORTHO05D000515 1.3e-08 64.3 130 27.7
Lj2P716T13 Lonicera japonica HOM05D000687 ORTHO05D000515 1.3e-08 64.3 122 30.3
FvH4_3g44860 Fragaria vesca HOM05D000687 ORTHO05D000515 1.7e-08 63.9 145 28.3
FAN11G2469 Fragaria x ananassa HOM05D000687 ORTHO05D000515 1.7e-08 63.9 145 28.3
FAN25G1069 Fragaria x ananassa HOM05D000687 ORTHO05D000515 1.7e-08 63.9 145 29.0
MELO3C015079.2 Cucumis melo HOM05D000687 ORTHO05D000515 2.9e-08 63.2 120 30.8
FAN16G1395 Fragaria x ananassa HOM05D000687 ORTHO05D000515 2.9e-08 63.2 145 29.0
HanXRQChr13g0405131 Helianthus annuus HOM05D013023 ORTHO05D226889 2.9e-08 63.2 150 30.7
MBI01_g46867_MAGBIO Magnolia biondii HOM05D000687 ORTHO05D000515 2.9e-08 63.2 128 28.1
MBI01_g48123_MAGBIO Magnolia biondii HOM05D000687 ORTHO05D000515 4.9e-08 62.4 131 28.2
Nitab4.5_0003190g0040 Nicotiana tabacum HOM05D000687 ORTHO05D000515 4.9e-08 62.4 129 27.1
Prupe.6G009800 Prunus persica HOM05D000687 ORTHO05D000515 6.4e-08 62.0 137 28.5
Oeu040302.1 Olea europaea HOM05D000687 ORTHO05D000515 1.1e-07 61.2 127 29.9
Psat7g073400 Pisum sativum HOM05D000687 ORTHO05D000515 1.1e-07 61.2 122 29.5
Actinidia06290 Actinidia chinensis HOM05D000687 ORTHO05D000515 1.4e-07 60.8 130 28.5
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 1.4e-07 60.8 136 26.5
Lj4g0008393 Lotus japonicus HOM05D000687 ORTHO05D000515 1.4e-07 60.8 148 25.7
HPP92_015917 Vanilla planifolia HOM05D000687 ORTHO05D000515 1.4e-07 60.8 76 39.5
Cfa009609 Carpinus fangiana HOM05D000687 ORTHO05D000515 1.8e-07 60.5 122 28.7
Haze_22981 Corylus avellana HOM05D000687 ORTHO05D000515 1.8e-07 60.5 122 28.7
Lj1P549T8 Lonicera japonica HOM05D000687 ORTHO05D000515 1.8e-07 60.5 130 30.0
Lj1P552T9 Lonicera japonica HOM05D000687 ORTHO05D000515 1.8e-07 60.5 130 30.0
MBI01_g46866_MAGBIO Magnolia biondii HOM05D000687 ORTHO05D000515 1.8e-07 60.5 120 29.2
MBI01_g48122_MAGBIO Magnolia biondii HOM05D000687 ORTHO05D000515 1.8e-07 60.5 120 29.2
RcHm_v2.0_Chr5g0081571 Rosa chinensis HOM05D000687 ORTHO05D000515 1.8e-07 60.5 148 27.0
SEGI_40499 Sequoiadendron giganteum HOM05D000687 ORTHO05D000515 1.8e-07 60.5 119 31.9
TWI32G0573 Tripterygium wilfordii HOM05D000687 ORTHO05D000515 2.4e-07 60.1 172 25.6
Atru.chr3.2283 Acer truncatum HOM05D000687 ORTHO05D000515 3.2e-07 59.7 130 27.7
Eucgr.J01799 Eucalyptus grandis HOM05D000687 ORTHO05D000515 3.2e-07 59.7 132 29.5
HanXRQChr13g0405121 Helianthus annuus HOM05D013023 ORTHO05D221139 3.2e-07 59.7 104 32.7
Sc09g0000230 Simmondsia chinensis HOM05D000687 ORTHO05D000515 3.2e-07 59.7 82 34.1
SGA_v2.0_scaffold6G03426 Striga asiatica HOM05D000687 ORTHO05D000515 3.2e-07 59.7 152 27.0
Actinidia06289 Actinidia chinensis HOM05D000687 ORTHO05D000515 4.1e-07 59.3 79 38.0
MD03G1007800 Malus domestica HOM05D000687 ORTHO05D000515 4.1e-07 59.3 120 30.8
PSO384G0183 Papaver somniferum HOM05D000687 ORTHO05D000515 4.1e-07 59.3 78 38.5
QL01p008041 Quercus lobata HOM05D000687 ORTHO05D000515 4.1e-07 59.3 168 27.4
Rhsim01G0185300 Rhododendron simsii HOM05D000687 ORTHO05D000515 4.1e-07 59.3 134 29.1
unitig_26.g9442 Utricularia gibba HOM05D001030 ORTHO05D002278 4.1e-07 59.3 85 35.3
GSVIVG01033439001 Vitis vinifera HOM05D000687 ORTHO05D000515 4.1e-07 59.3 120 28.3
arahy.Tifrunner.gnm1.ann1.H8CKZE Arachis hypogaea HOM05D000687 ORTHO05D000515 5.4e-07 58.9 183 25.1
Cpa.g.sc119.80 Carica papaya HOM05D000687 ORTHO05D000515 5.4e-07 58.9 126 27.8
Manes.03G088300 Manihot esculenta HOM05D000687 ORTHO05D000515 7.0e-07 58.5 124 26.6
Potri.003G217200 Populus trichocarpa HOM05D000687 ORTHO05D000515 7.0e-07 58.5 129 31.0
Sabra03G0162200 Salix brachista HOM05D000687 ORTHO05D000515 7.0e-07 58.5 129 30.2
arahy.Tifrunner.gnm1.ann1.6YF7SG Arachis hypogaea HOM05D000687 ORTHO05D000515 9.2e-07 58.2 183 25.1
Dinv22330 Davidia involucrata HOM05D000687 ORTHO05D000515 9.2e-07 58.2 136 27.2
Oeu033929.1 Olea europaea HOM05D000687 ORTHO05D000515 9.2e-07 58.2 121 31.4
SEGI_30105 Sequoiadendron giganteum HOM05D000687 ORTHO05D000515 9.2e-07 58.2 120 29.2
THA.LOC104815660 Tarenaya hassleriana HOM05D000687 ORTHO05D000515 9.2e-07 58.2 131 29.0
vmacro12614 Vaccinium macrocarpon HOM05D000687 ORTHO05D000515 9.2e-07 58.2 147 26.5
Haze_22980 Corylus avellana HOM05D000687 ORTHO05D000515 1.2e-06 57.8 167 25.1
Gorai.009G341700 Gossypium raimondii HOM05D000687 ORTHO05D000515 1.2e-06 57.8 129 26.4
HanXRQChr11g0344901 Helianthus annuus HOM05D000687 ORTHO05D000515 1.2e-06 57.8 74 37.8
vmacro09594 Vaccinium macrocarpon HOM05D000687 ORTHO05D000515 1.2e-06 57.8 120 29.2
arahy.Tifrunner.gnm1.ann1.3SGI17 Arachis hypogaea HOM05D000001 ORTHO05D001705 1.6e-06 57.4 82 37.8
Gohir.D05G318700 Gossypium hirsutum HOM05D000687 ORTHO05D000515 1.6e-06 57.4 129 25.6
Manes.15G105900 Manihot esculenta HOM05D000687 ORTHO05D000515 1.6e-06 57.4 122 26.2
Medtr8g085590 Medicago truncatula HOM05D000687 ORTHO05D000515 1.6e-06 57.4 74 36.5
Nitab4.5_0001059g0040 Nicotiana tabacum HOM05D000687 ORTHO05D000515 1.6e-06 57.4 155 25.2
CsaV3_1G043700 Cucumis sativus L. HOM05D000687 ORTHO05D000515 2.0e-06 57.0 120 30.0
Solyc01g005980.4 Solanum lycopersicum HOM05D000687 ORTHO05D000515 2.0e-06 57.0 151 25.8
Sopen01g001990 Solanum pennellii HOM05D000687 ORTHO05D000515 2.0e-06 57.0 151 25.8
Aa31LG10G1030 Aethionema arabicum HOM05D001204 ORTHO05D001428 2.7e-06 56.6 123 28.5
CAN.G190.3 Capsicum annuum HOM05D000687 ORTHO05D000515 2.7e-06 56.6 134 27.6
CiPaw.13G174400 Carya illinoinensis HOM05D000687 ORTHO05D000515 2.7e-06 56.6 128 28.1
Migut.D02528 Erythranthe guttata HOM05D000687 ORTHO05D000515 2.7e-06 56.6 110 29.1
PGR102G2471 Punica granatum HOM05D000687 ORTHO05D000515 2.7e-06 56.6 121 30.6
QL01p008034 Quercus lobata HOM05D000687 ORTHO05D000515 2.7e-06 56.6 131 25.2
HPP92_015938 Vanilla planifolia HOM05D000687 ORTHO05D000515 2.7e-06 56.6 104 32.7
AT1G55265 Arabidopsis thaliana HOM05D000687 ORTHO05D000515 3.5e-06 56.2 131 29.8
CDE05G3074 Ceratophyllum demersum HOM05D000687 ORTHO05D000515 3.5e-06 56.2 120 29.2
Cc05_g12970 Coffea canephora HOM05D000687 ORTHO05D000515 3.5e-06 56.2 139 27.3
Duzib150G0869 Durio zibethinus HOM05D000687 ORTHO05D000515 3.5e-06 56.2 120 27.5
Eucgr.J01800 Eucalyptus grandis HOM05D000687 ORTHO05D000515 3.5e-06 56.2 73 37.0
Hma1.2p1_0337F.1_g129440 Hydrangea macrophylla HOM05D000687 ORTHO05D000515 3.5e-06 56.2 120 30.0
BcaB02g10833 Brassica carinata HOM05D000687 ORTHO05D000515 4.6e-06 55.8 122 30.3
CAN.G575.6 Capsicum annuum HOM05D000687 ORTHO05D000515 4.6e-06 55.8 125 28.8
DCAR_024335 Daucus carota HOM05D000687 ORTHO05D000515 4.6e-06 55.8 73 38.4
Gohir.A05G317000 Gossypium hirsutum HOM05D000687 ORTHO05D000515 4.6e-06 55.8 76 32.9
Manes.03G088200 Manihot esculenta HOM05D000687 ORTHO05D000515 4.6e-06 55.8 85 35.3
Rhsim01G0185400 Rhododendron simsii HOM05D000687 ORTHO05D000515 4.6e-06 55.8 120 27.5
TPR.G11818 Trifolium pratense HOM05D000687 ORTHO05D000515 4.6e-06 55.8 74 36.5
Glyma.08G112400 Glycine max HOM05D000687 ORTHO05D000515 5.9e-06 55.5 121 25.6
Sopen01g016530 Solanum pennellii HOM05D000687 ORTHO05D000515 5.9e-06 55.5 127 26.0
PGSC0003DMG400032181 Solanum tuberosum HOM05D000687 ORTHO05D000515 5.9e-06 55.5 132 27.3
CARHR044920 Cardamine hirsuta HOM05D000687 ORTHO05D000515 7.8e-06 55.1 118 28.8
Medtr8g085580 Medicago truncatula HOM05D000687 ORTHO05D000515 7.8e-06 55.1 120 25.8
Oeu005437.1 Olea europaea HOM05D000687 ORTHO05D000515 7.8e-06 55.1 123 28.5
Phvul.002G234500 Phaseolus vulgaris HOM05D000687 ORTHO05D000515 7.8e-06 55.1 121 25.6
Sp1g40930 Schrenkiella parvula HOM05D000687 ORTHO05D000515 7.8e-06 55.1 121 27.3
vmacro12613 Vaccinium macrocarpon HOM05D000687 ORTHO05D000515 7.8e-06 55.1 129 27.9


User provided reference genes

Program Settings