Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0127301 Helianthus annuus HOM05D013023 ORTHO05D219700 2.1e-97 359.0 179 100.0
HanXRQChr04g0127361 Helianthus annuus HOM05D013023 ORTHO05D227252 2.6e-87 325.5 179 89.9
HanXRQChr04g0127341 Helianthus annuus HOM05D013023 ORTHO05D222451 6.9e-80 300.8 179 86.0
HanXRQChr16g0499581 Helianthus annuus HOM05D013023 ORTHO05D225105 7.9e-68 260.8 180 75.0
HanXRQChr04g0127321 Helianthus annuus HOM05D013023 ORTHO05D219833 2.3e-67 259.2 175 76.0
HanXRQChr04g0127141 Helianthus annuus HOM05D013023 ORTHO05D224213 2.5e-66 255.8 178 72.5
HanXRQChr04g0127271 Helianthus annuus HOM05D013023 ORTHO05D000515 3.1e-64 248.8 180 71.1
HanXRQChr16g0499711 Helianthus annuus HOM05D013023 ORTHO05D226073 1.8e-56 223.0 182 67.6
HanXRQChr10g0319181 Helianthus annuus HOM05D013023 ORTHO05D007045 4.3e-50 201.8 183 63.9
HanXRQChr10g0319211 Helianthus annuus HOM05D013023 ORTHO05D227658 4.5e-47 191.8 142 66.9
HanXRQChr04g0127201 Helianthus annuus HOM05D013023 ORTHO05D222573 5.5e-37 158.3 122 68.9
HanXRQChr13g0404121 Helianthus annuus HOM05D000687 ORTHO05D000515 5.0e-14 82.0 169 33.7
Ciclev10016930m.g Citrus clementina HOM05D000687 ORTHO05D000515 8.8e-11 71.2 154 31.8
ECA238G1047 Erigeron canadensis HOM05D000687 ORTHO05D000515 1.2e-10 70.9 175 28.6
HanXRQChr14g0453341 Helianthus annuus HOM05D000687 ORTHO05D000515 1.2e-10 70.9 174 30.5
MD11G1011000 Malus domestica HOM05D000687 ORTHO05D000515 4.4e-10 68.9 155 30.3
Prupe.6G009800 Prunus persica HOM05D000687 ORTHO05D000515 2.8e-09 66.2 154 29.2
SalBow6G5952 Salvia bowleyana HOM05D000687 ORTHO05D000515 2.8e-09 66.2 176 28.4
MBI01_g46867_MAGBIO Magnolia biondii HOM05D000687 ORTHO05D000515 1.8e-08 63.5 142 28.2
HPP92_020683 Vanilla planifolia HOM05D000687 ORTHO05D000515 1.8e-08 63.5 98 38.8
HanXRQChr13g0405131 Helianthus annuus HOM05D013023 ORTHO05D226889 2.4e-08 63.2 174 31.6
Lj2P716T13 Lonicera japonica HOM05D000687 ORTHO05D000515 2.4e-08 63.2 153 28.8
FvH4_3g44860 Fragaria vesca HOM05D000687 ORTHO05D000515 3.1e-08 62.8 149 29.5
MBI01_g48123_MAGBIO Magnolia biondii HOM05D000687 ORTHO05D000515 3.1e-08 62.8 145 28.3
TWI60G1469 Tripterygium wilfordii HOM05D000687 ORTHO05D000515 4.1e-08 62.4 174 26.4
MD03G1007800 Malus domestica HOM05D000687 ORTHO05D000515 5.4e-08 62.0 147 29.9
FAN11G2469 Fragaria x ananassa HOM05D000687 ORTHO05D000515 7.0e-08 61.6 148 29.1
FAN21G3570 Fragaria x ananassa HOM05D000687 ORTHO05D000515 1.2e-07 60.8 149 30.2
MBI01_g46866_MAGBIO Magnolia biondii HOM05D000687 ORTHO05D000515 1.2e-07 60.8 150 28.0
MBI01_g48122_MAGBIO Magnolia biondii HOM05D000687 ORTHO05D000515 1.2e-07 60.8 150 28.0
Nitab4.5_0003190g0040 Nicotiana tabacum HOM05D000687 ORTHO05D000515 1.2e-07 60.8 151 28.5
SGA_v2.0_scaffold6G03426 Striga asiatica HOM05D000687 ORTHO05D000515 1.2e-07 60.8 151 28.5
MELO3C015079.2 Cucumis melo HOM05D000687 ORTHO05D000515 1.6e-07 60.5 146 28.8
Nitab4.5_0000254g0250 Nicotiana tabacum HOM05D000687 ORTHO05D000515 2.7e-07 59.7 150 27.3
Nitab4.5_0001059g0040 Nicotiana tabacum HOM05D000687 ORTHO05D000515 2.7e-07 59.7 162 29.0
TWI32G0573 Tripterygium wilfordii HOM05D000687 ORTHO05D000515 2.7e-07 59.7 149 29.5
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 3.5e-07 59.3 146 26.7
FAN16G1395 Fragaria x ananassa HOM05D000687 ORTHO05D000515 3.5e-07 59.3 147 28.6
HanXRQChr13g0405121 Helianthus annuus HOM05D013023 ORTHO05D221139 3.5e-07 59.3 140 31.4
Cc01_g02430 Coffea canephora HOM05D000687 ORTHO05D000515 4.5e-07 58.9 152 28.9
Lj4g0008393 Lotus japonicus HOM05D000687 ORTHO05D000515 4.5e-07 58.9 182 24.7
Rhsim01G0185300 Rhododendron simsii HOM05D000687 ORTHO05D000515 4.5e-07 58.9 158 28.5
Solyc01g005980.4 Solanum lycopersicum HOM05D000687 ORTHO05D000515 4.5e-07 58.9 154 28.6
Sopen01g001990 Solanum pennellii HOM05D000687 ORTHO05D000515 4.5e-07 58.9 154 28.6
Migut.D02528 Erythranthe guttata HOM05D000687 ORTHO05D000515 5.9e-07 58.5 126 29.4
Psat7g073400 Pisum sativum HOM05D000687 ORTHO05D000515 5.9e-07 58.5 122 29.5
Potri.003G217200 Populus trichocarpa HOM05D000687 ORTHO05D000515 5.9e-07 58.5 153 31.4
Haze_22981 Corylus avellana HOM05D000687 ORTHO05D000515 7.7e-07 58.2 148 29.7
FAN25G1069 Fragaria x ananassa HOM05D000687 ORTHO05D000515 1.0e-06 57.8 157 28.7
Lj1P549T8 Lonicera japonica HOM05D000687 ORTHO05D000515 1.0e-06 57.8 130 30.0
Lj1P552T9 Lonicera japonica HOM05D000687 ORTHO05D000515 1.0e-06 57.8 130 30.0
Oeu040302.1 Olea europaea HOM05D000687 ORTHO05D000515 1.0e-06 57.8 145 29.0
SEGI_40499 Sequoiadendron giganteum HOM05D000687 ORTHO05D000515 1.0e-06 57.8 119 31.9
Cfa009609 Carpinus fangiana HOM05D000687 ORTHO05D000515 1.3e-06 57.4 155 28.4
Sabra03G0162200 Salix brachista HOM05D000687 ORTHO05D000515 1.3e-06 57.4 153 30.1
vmacro12614 Vaccinium macrocarpon HOM05D000687 ORTHO05D000515 1.3e-06 57.4 150 26.7
Medtr8g085580 Medicago truncatula HOM05D000687 ORTHO05D000515 1.7e-06 57.0 154 26.6
GSVIVG01033439001 Vitis vinifera HOM05D000687 ORTHO05D000515 1.7e-06 57.0 120 28.3
HanXRQChr11g0344901 Helianthus annuus HOM05D000687 ORTHO05D000515 2.3e-06 56.6 110 34.5
RcHm_v2.0_Chr5g0081571 Rosa chinensis HOM05D000687 ORTHO05D000515 2.3e-06 56.6 124 28.2
unitig_26.g9442 Utricularia gibba HOM05D001030 ORTHO05D002278 2.3e-06 56.6 98 32.7
HPP92_015917 Vanilla planifolia HOM05D000687 ORTHO05D000515 2.3e-06 56.6 103 35.9
arahy.Tifrunner.gnm1.ann1.H8CKZE Arachis hypogaea HOM05D000687 ORTHO05D000515 2.9e-06 56.2 171 26.3
PSO384G0183 Papaver somniferum HOM05D000687 ORTHO05D000515 2.9e-06 56.2 109 34.9
QL01p008041 Quercus lobata HOM05D000687 ORTHO05D000515 2.9e-06 56.2 149 28.9
Sabra01G0006500 Salix brachista HOM05D000687 ORTHO05D000515 2.9e-06 56.2 154 27.9
Oeu033929.1 Olea europaea HOM05D000687 ORTHO05D000515 3.8e-06 55.8 121 31.4
Sopen01g016530 Solanum pennellii HOM05D000687 ORTHO05D000515 3.8e-06 55.8 158 27.2
HPP92_015938 Vanilla planifolia HOM05D000687 ORTHO05D000515 3.8e-06 55.8 101 35.6
Actinidia06289 Actinidia chinensis HOM05D000687 ORTHO05D000515 5.0e-06 55.5 100 34.0
CAN.G190.3 Capsicum annuum HOM05D000687 ORTHO05D000515 5.0e-06 55.5 151 28.5
Cpa.g.sc119.80 Carica papaya HOM05D000687 ORTHO05D000515 5.0e-06 55.5 145 26.2
CiPaw.13G174300 Carya illinoinensis HOM05D000687 ORTHO05D000515 5.0e-06 55.5 145 28.3
Manes.03G088300 Manihot esculenta HOM05D000687 ORTHO05D000515 5.0e-06 55.5 151 25.8
PGR102G2471 Punica granatum HOM05D000687 ORTHO05D000515 5.0e-06 55.5 141 31.2
SEGI_30105 Sequoiadendron giganteum HOM05D000687 ORTHO05D000515 5.0e-06 55.5 120 29.2
Sc16g0012060 Simmondsia chinensis HOM05D000687 ORTHO05D000515 6.6e-06 55.1 138 26.1
THA.LOC104815660 Tarenaya hassleriana HOM05D000687 ORTHO05D000515 6.6e-06 55.1 131 29.0
PGSC0003DMG400032181 Solanum tuberosum HOM05D000687 ORTHO05D000515 8.6e-06 54.7 154 27.3


User provided reference genes

Program Settings