Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0126911 Helianthus annuus HOM05D004421 ORTHO05D005227 3.1e-96 355.1 180 100.0
Lsat_1_v5_gn_7_92700 Lactuca sativa HOM05D004421 ORTHO05D005227 6.3e-49 198.0 112 87.5
Hma1.2p1_0445F.1_g154450 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 1.4e-48 196.8 109 87.2
Eucgr.B01010 Eucalyptus grandis HOM05D004421 ORTHO05D005227 9.1e-48 194.1 102 91.2
Cfa014325 Carpinus fangiana HOM05D004421 ORTHO05D005227 4.5e-47 191.8 104 87.5
vmacro09354 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 4.5e-47 191.8 104 88.5
ECA236G3405 Erigeron canadensis HOM05D004421 ORTHO05D005227 5.9e-47 191.4 114 87.7
Hma1.2p1_0177F.1_g077900 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 5.9e-47 191.4 104 88.5
Hma1.2p1_0177F.1_g077905 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 5.9e-47 191.4 104 88.5
CANSAT64G1364 Cannabis sativa HOM05D004421 ORTHO05D005227 1.0e-46 190.7 111 82.9
CSS0000360 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 2.2e-46 189.5 104 88.5
CiPaw.08G089000 Carya illinoinensis HOM05D004421 ORTHO05D005227 3.8e-46 188.7 103 89.3
QL10p065608 Quercus lobata HOM05D004421 ORTHO05D005227 3.8e-46 188.7 104 86.5
Rhsim04G0051300 Rhododendron simsii HOM05D004421 ORTHO05D005227 3.8e-46 188.7 104 88.5
CSS0029217 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 5.0e-46 188.3 104 87.5
LjContig00564g0020145 Lotus japonicus HOM05D004421 ORTHO05D005227 5.0e-46 188.3 104 86.5
LjContig00564g0024160 Lotus japonicus HOM05D004421 ORTHO05D005227 5.0e-46 188.3 104 86.5
CiPaw.03G156500 Carya illinoinensis HOM05D004421 ORTHO05D005227 8.5e-46 187.6 103 87.4
Haze_12777 Corylus avellana HOM05D004421 ORTHO05D005227 8.5e-46 187.6 104 86.5
QL08p031014 Quercus lobata HOM05D004421 ORTHO05D005227 8.5e-46 187.6 104 86.5
LjContig00564g0000485 Lotus japonicus HOM05D004421 ORTHO05D005227 1.5e-45 186.8 104 85.6
LjContig00564g0024311 Lotus japonicus HOM05D004421 ORTHO05D005227 1.5e-45 186.8 104 85.6
QL10p065434 Quercus lobata HOM05D004421 ORTHO05D005227 1.5e-45 186.8 104 85.6
TAR629G1061 Trochodendron aralioides HOM05D004421 ORTHO05D005227 1.9e-45 186.4 103 88.3
PGR042G0750 Punica granatum HOM05D004421 ORTHO05D005227 2.5e-45 186.0 104 86.5
DCAR_019262 Daucus carota HOM05D004421 ORTHO05D005227 3.2e-45 185.7 110 82.7
Thecc.07G030200 Theobroma cacao HOM05D004421 ORTHO05D005227 5.5e-45 184.9 104 85.6
Phvul.008G212200 Phaseolus vulgaris HOM05D004421 ORTHO05D005227 7.2e-45 184.5 100 88.0
Glyma.14G047100 Glycine max HOM05D004421 ORTHO05D005227 9.4e-45 184.1 100 88.0
Gorai.005G241500 Gossypium raimondii HOM05D004421 ORTHO05D005227 9.4e-45 184.1 104 85.6
Nitab4.5_0005588g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 9.4e-45 184.1 104 84.6
Potri.002G225600 Populus trichocarpa HOM05D004421 ORTHO05D005227 9.4e-45 184.1 104 85.6
Prupe.3G211700 Prunus persica HOM05D004421 ORTHO05D005227 9.4e-45 184.1 104 86.5
TWI36G1565 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 9.4e-45 184.1 105 84.8
arahy.Tifrunner.gnm1.ann1.J4LN0V Arachis hypogaea HOM05D004421 ORTHO05D005227 1.2e-44 183.7 104 83.7
DCAR_012923 Daucus carota HOM05D004421 ORTHO05D005227 1.2e-44 183.7 110 82.7
VMungo0647G1664 Vigna mungo HOM05D004421 ORTHO05D005227 1.2e-44 183.7 100 88.0
arahy.Tifrunner.gnm1.ann1.BKRM87 Arachis hypogaea HOM05D004421 ORTHO05D005227 1.6e-44 183.3 104 83.7
CAN.G149.31 Capsicum annuum HOM05D004421 ORTHO05D005227 1.6e-44 183.3 109 79.8
Rhsim06G0166700 Rhododendron simsii HOM05D004421 ORTHO05D005227 1.6e-44 183.3 104 85.6
AUR62030497 Chenopodium quinoa HOM05D004421 ORTHO05D005227 2.1e-44 183.0 100 86.0
Duzib128G1691 Durio zibethinus HOM05D004421 ORTHO05D005227 2.1e-44 183.0 109 83.5
Lsat_1_v5_gn_5_123820 Lactuca sativa HOM05D004421 ORTHO05D005227 2.1e-44 183.0 99 87.9
Manes.13G067100 Manihot esculenta HOM05D004421 ORTHO05D005227 2.1e-44 183.0 104 86.5
Sabra02G0172700 Salix brachista HOM05D004421 ORTHO05D005227 2.1e-44 183.0 107 83.2
CAN.G358.76 Capsicum annuum HOM05D004421 ORTHO05D005227 2.7e-44 182.6 115 75.7
Lalb_Chr10g0105671 Lupinus albus HOM05D004421 ORTHO05D005227 2.7e-44 182.6 104 82.7
Psat4g220560 Pisum sativum HOM05D004421 ORTHO05D005227 2.7e-44 182.6 103 83.5
EL10Ac5g12553 Beta vulgaris HOM05D004421 ORTHO05D005227 3.6e-44 182.2 104 85.6
ClCG02G009100 Citrullus lanatus HOM05D004421 ORTHO05D005227 3.6e-44 182.2 106 82.1
Peaxi162Scf00047g00850 Petunia axillaris HOM05D004421 ORTHO05D005227 3.6e-44 182.2 115 76.5
GSVIVG01036899001 Vitis vinifera HOM05D004421 ORTHO05D005227 3.6e-44 182.2 105 84.8
AUR62030797 Chenopodium quinoa HOM05D004421 ORTHO05D005227 4.7e-44 181.8 100 85.0
Gohir.A03G192600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 6.1e-44 181.4 104 84.6
Nitab4.5_0007533g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 6.1e-44 181.4 114 77.2
ECA234G2260 Erigeron canadensis HOM05D004421 ORTHO05D005227 8.0e-44 181.0 99 86.9
Potri.014G157400 Populus trichocarpa HOM05D004421 ORTHO05D005227 8.0e-44 181.0 104 84.6
Sed0012667 Sechium edule HOM05D004421 ORTHO05D005227 8.0e-44 181.0 104 83.7
TWI79G1637 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 8.0e-44 181.0 105 83.8
Nitab4.5_0000138g0020 Nicotiana tabacum HOM05D004421 ORTHO05D005227 1.0e-43 180.6 100 86.0
Cpa.g.sc12.255 Carica papaya HOM05D004421 ORTHO05D005227 1.4e-43 180.3 101 87.1
Medtr8g099150 Medicago truncatula HOM05D004421 ORTHO05D005227 1.4e-43 180.3 104 81.7
MSTRG.14457 Avicennia marina HOM05D004421 ORTHO05D005227 2.3e-43 179.5 104 83.7
Ciclev10009985m.g Citrus clementina HOM05D004421 ORTHO05D005227 2.3e-43 179.5 99 86.9
Glyma.02G269800 Glycine max HOM05D004421 ORTHO05D005227 2.3e-43 179.5 100 86.0
TPR.G7933 Trifolium pratense HOM05D004421 ORTHO05D005227 2.3e-43 179.5 103 82.5
CsaV3_2G034620 Cucumis sativus L. HOM05D004421 ORTHO05D005227 3.0e-43 179.1 104 81.7
FAN02G1632 Fragaria x ananassa HOM05D004421 ORTHO05D005227 3.0e-43 179.1 105 81.0
FAN09G1846 Fragaria x ananassa HOM05D004421 ORTHO05D005227 3.0e-43 179.1 116 75.9
FvH4_6g42460 Fragaria vesca HOM05D004421 ORTHO05D005227 4.0e-43 178.7 105 81.0
FAN14G1774 Fragaria x ananassa HOM05D004421 ORTHO05D005227 4.0e-43 178.7 105 81.0
Medtr8g016300 Medicago truncatula HOM05D004421 ORTHO05D005227 4.0e-43 178.7 104 80.8
Oeu013122.1 Olea europaea HOM05D004421 ORTHO05D005227 4.0e-43 178.7 112 78.6
Peaxi162Scf00149g00049 Petunia axillaris HOM05D004421 ORTHO05D005227 4.0e-43 178.7 104 81.7
FAN05G5559 Fragaria x ananassa HOM05D004421 ORTHO05D005227 5.2e-43 178.3 104 81.7
Gohir.D02G213600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 5.2e-43 178.3 104 83.7
RcHm_v2.0_Chr2g0158361 Rosa chinensis HOM05D004421 ORTHO05D005227 5.2e-43 178.3 104 81.7
Solyc02g068770.4 Solanum lycopersicum HOM05D004421 ORTHO05D005227 5.2e-43 178.3 113 76.1
Sopen02g017940 Solanum pennellii HOM05D004421 ORTHO05D005227 5.2e-43 178.3 108 79.6
Ca_23316_v3 Cicer arietinum L. HOM05D004421 ORTHO05D005227 8.8e-43 177.6 103 79.6
MSTRG.12990 Avicennia marina HOM05D004421 ORTHO05D005227 1.2e-42 177.2 105 81.9
Nitab4.5_0001288g0200 Nicotiana tabacum HOM05D004421 ORTHO05D005227 1.2e-42 177.2 109 79.8
PGSC0003DMG400010437 Solanum tuberosum HOM05D004421 ORTHO05D005227 1.2e-42 177.2 104 80.8
Ah.12g058680 Amaranthus hybridus HOM05D004421 ORTHO05D005227 2.0e-42 176.4 104 83.7
TPR.G1800 Trifolium pratense HOM05D004421 ORTHO05D005227 2.0e-42 176.4 103 80.6
CAN.G358.77 Capsicum annuum HOM05D004421 ORTHO05D005227 4.4e-42 175.3 104 79.8
Aqoxy6G00590 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 5.7e-42 174.9 109 76.1
Sc12g0002130 Simmondsia chinensis HOM05D004421 ORTHO05D005227 5.7e-42 174.9 104 83.7
Aqoxy7G01112 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 1.3e-41 173.7 102 80.4
unitig_748.g8294 Utricularia gibba HOM05D004421 ORTHO05D005227 1.7e-41 173.3 98 85.7
SGA_v2.0_scaffold392G50685 Striga asiatica HOM05D004421 ORTHO05D005227 2.2e-41 172.9 104 82.7
Oeu054302.1 Olea europaea HOM05D004421 ORTHO05D005227 6.3e-41 171.4 112 75.9
unitig_32.g10858 Utricularia gibba HOM05D004421 ORTHO05D005227 6.3e-41 171.4 98 85.7
SHI33915 Sapria himalayana HOM05D004421 ORTHO05D005227 8.2e-41 171.0 117 75.2
MELO3C019309.2 Cucumis melo HOM05D004421 ORTHO05D005227 1.1e-40 170.6 96 84.4
SalBow3G0779 Salvia bowleyana HOM05D004421 ORTHO05D005227 1.1e-40 170.6 101 80.2
CDE04G3645 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 1.4e-40 170.2 98 81.6
PSO017G4413 Papaver somniferum HOM05D004421 ORTHO05D005227 1.8e-40 169.9 103 80.6
PSO675G5827 Papaver somniferum HOM05D004421 ORTHO05D005227 1.8e-40 169.9 103 80.6
Eucgr.B01013 Eucalyptus grandis HOM05D004421 ORTHO05D005227 3.1e-40 169.1 95 88.4
CDE06G2669 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 5.3e-40 168.3 98 80.6
Atru.chr2.3508 Acer truncatum HOM05D004421 ORTHO05D005227 9.1e-40 167.5 104 75.0
SGA_v2.0_scaffold363G49953 Striga asiatica HOM05D004421 ORTHO05D005227 2.7e-39 166.0 104 79.8
Hund24697 Selenicereus undatus HOM05D004421 ORTHO05D005227 4.5e-39 165.2 101 82.2
Cc05_g14180 Coffea canephora HOM05D004421 ORTHO05D005227 5.9e-39 164.9 101 81.2
ATR0665G259 Amborella trichopoda HOM05D004421 ORTHO05D005227 2.9e-38 162.5 98 78.6
Cc05_g02530 Coffea canephora HOM05D004421 ORTHO05D005227 1.1e-37 160.6 102 76.5
COL.COLO4_09709 Corchorus olitorius HOM05D004421 ORTHO05D005227 1.1e-37 160.6 100 78.0
SGA_v2.0_scaffold159G37698 Striga asiatica HOM05D004421 ORTHO05D005227 1.1e-37 160.6 98 79.6
THA.LOC104811627 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 2.5e-37 159.5 99 77.8
MBI16_g23852_MAGBIO Magnolia biondii HOM05D004421 ORTHO05D005227 2.1e-36 156.4 104 72.1
THA.LOC104813431 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 2.7e-36 156.0 98 77.6
BcaB08g35879 Brassica carinata HOM05D004421 ORTHO05D005227 1.0e-35 154.1 105 72.4
A02p09830 Brassica napus HOM05D004421 ORTHO05D005227 1.4e-35 153.7 104 71.2
Thhalv10015072m.g Eutrema salsugineum HOM05D004421 ORTHO05D005227 2.3e-35 152.9 105 73.3
BcaC04g20265 Brassica carinata HOM05D004421 ORTHO05D005227 3.0e-35 152.5 105 71.4
BraA02t06048Z Brassica rapa HOM05D004421 ORTHO05D005227 3.0e-35 152.5 104 70.2
BraA10t43337Z Brassica rapa HOM05D004421 ORTHO05D005227 3.0e-35 152.5 105 71.4
BcaB05g22185 Brassica carinata HOM05D004421 ORTHO05D005227 5.2e-35 151.8 103 69.9
C02p16370 Brassica napus HOM05D004421 ORTHO05D005227 6.8e-35 151.4 105 70.5
BolC2t07739H Brassica oleracea HOM05D004421 ORTHO05D005227 6.8e-35 151.4 105 70.5
Aa31LG3G11160 Aethionema arabicum HOM05D004421 ORTHO05D005227 3.4e-34 149.1 98 71.4
A05p12050 Brassica napus HOM05D004421 ORTHO05D005227 7.5e-34 147.9 106 70.8
A10p12420 Brassica napus HOM05D004421 ORTHO05D005227 7.5e-34 147.9 106 70.8
C09p45840 Brassica napus HOM05D004421 ORTHO05D005227 7.5e-34 147.9 106 70.8
BolC9t57441H Brassica oleracea HOM05D004421 ORTHO05D005227 7.5e-34 147.9 106 70.8
Sp6g17090 Schrenkiella parvula HOM05D004421 ORTHO05D005227 9.8e-34 147.5 98 70.4
CSS0048822 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 1.7e-33 146.7 104 74.0
Carub.0008s1546 Capsella rubella HOM05D004421 ORTHO05D005227 2.2e-33 146.4 98 69.4
AT5G55140 Arabidopsis thaliana HOM05D004421 ORTHO05D005227 6.3e-33 144.8 98 69.4
AL8G30670 Arabidopsis lyrata HOM05D004421 ORTHO05D005227 8.3e-33 144.4 98 68.4
CARHR268500 Cardamine hirsuta HOM05D004421 ORTHO05D005227 8.3e-33 144.4 105 68.6
Zm00001eb211500 Zea mays HOM05D004421 ORTHO05D005227 9.1e-32 141.0 99 69.7
TPR.G40166 Trifolium pratense HOM05D004421 ORTHO05D005227 1.2e-31 140.6 87 77.0
Lj2g0010759 Lotus japonicus HOM05D004421 ORTHO05D005227 2.0e-31 139.8 104 71.2
HPP92_026149 Vanilla planifolia HOM05D004421 ORTHO05D005227 7.7e-31 137.9 99 64.6
Os08g0110100 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 2.3e-30 136.3 105 64.8
vmacro12170 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 3.2e-29 132.5 89 78.7
Dinv22240 Davidia involucrata HOM05D004421 ORTHO05D005227 2.8e-28 129.4 66 90.9
BcaC03g14260 Brassica carinata HOM05D004421 ORTHO05D005227 2.0e-26 123.2 81 71.6
SEGI_06591 Sequoiadendron giganteum HOM05D004421 ORTHO05D005227 2.0e-26 123.2 108 55.6
Eucgr.B01894 Eucalyptus grandis HOM05D004421 ORTHO05D005227 2.6e-26 122.9 65 89.2
BraA03t14310Z Brassica rapa HOM05D004421 ORTHO05D005227 2.8e-25 119.4 96 65.6
A08p21130 Brassica napus HOM05D004421 ORTHO05D005227 6.3e-25 118.2 96 65.6
Hma1.2p1_2381F.1_g321010 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 3.1e-24 115.9 93 63.4
FvH4_6g04610 Fragaria vesca HOM05D004421 ORTHO05D005227 3.5e-23 112.5 75 77.3
BcaC03g14258 Brassica carinata HOM05D004421 ORTHO05D005227 2.3e-22 109.8 89 62.9
Mapoly0058s0042 Marchantia polymorpha HOM05D004421 ORTHO05D005227 6.6e-22 108.2 91 60.4
AagrBONN_evm.TU.Sc2ySwM_344.5034 Anthoceros agrestis HOM05D004421 ORTHO05D005227 1.9e-21 106.7 88 59.1
Os06g0339800 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 4.3e-21 105.5 108 53.7
HanXRQChr16g0506671 Helianthus annuus HOM05D004421 ORTHO05D005227 1.6e-20 103.6 62 88.7
Migut.H01800 Erythranthe guttata HOM05D004421 ORTHO05D005227 6.1e-20 101.7 56 83.9
Potri.010G076275 Populus trichocarpa HOM05D004421 ORTHO05D005227 5.7e-18 95.1 78 62.8
Pp3c26_2200 Physcomitrium patens HOM05D004421 ORTHO05D005227 1.7e-17 93.6 87 54.0
MD09G1112900 Malus domestica HOM05D004421 ORTHO05D005227 8.3e-17 91.3 54 81.5
Manes.12G070801 Manihot esculenta HOM05D004421 ORTHO05D005227 2.4e-16 89.7 57 77.2
GSVIVG01030492001 Vitis vinifera HOM05D004421 ORTHO05D005227 2.0e-15 86.7 55 80.0
RcHm_v2.0_Chr4g0419171 Rosa chinensis HOM05D004421 ORTHO05D005227 3.3e-13 79.3 104 45.2
SMO172G0081 Selaginella moellendorffii HOM05D004421 ORTHO05D005227 2.1e-12 76.6 86 46.5
Nn2g15167 Nelumbo nucifera HOM05D004421 ORTHO05D005227 1.1e-08 64.3 41 75.6
Cre05.g234659 Chlamydomonas reinhardtii HOM05D004421 ORTHO05D005227 3.5e-07 59.3 90 42.2


User provided reference genes

Program Settings