Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 8.4e-202 706.8 361 100.0
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.1e-177 626.7 355 89.9
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 8.7e-167 590.5 391 80.1
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 9.0e-164 580.5 360 81.9
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 7.2e-161 570.9 357 82.1
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 3.9e-159 565.1 362 80.9
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 2.6e-150 535.8 332 81.0
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 6.3e-149 531.2 381 73.0
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.1e-148 528.5 358 76.0
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 9.1e-148 527.3 356 75.6
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 9.1e-148 527.3 367 74.7
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.6e-147 526.6 358 76.0
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 2.0e-147 526.2 358 75.4
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 2.6e-147 525.8 358 76.0
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 5.9e-147 524.6 357 75.4
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 4.2e-145 518.5 355 75.8
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 2.1e-144 516.2 351 75.5
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 2.1e-144 516.2 357 74.5
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 2.7e-144 515.8 331 77.0
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 3.6e-144 515.4 346 76.3
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 6.1e-144 514.6 365 72.9
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 8.0e-144 514.2 368 73.1
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 1.0e-143 513.8 357 74.2
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 1.4e-143 513.5 357 73.9
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 1.8e-143 513.1 330 76.7
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 2.3e-143 512.7 351 72.9
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 6.7e-143 511.1 360 72.8
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.1e-142 510.4 355 74.1
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 3.3e-142 508.8 366 72.7
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 4.4e-142 508.4 358 73.2
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 5.7e-142 508.1 343 76.1
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.3e-141 506.9 371 70.9
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.3e-141 506.9 360 73.6
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.7e-141 506.5 363 73.6
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.2e-141 506.1 371 70.9
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.8e-141 505.8 359 72.4
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 3.7e-141 505.4 371 70.9
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 3.7e-141 505.4 359 73.0
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 3.7e-141 505.4 367 71.4
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 6.3e-141 504.6 342 73.7
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 6.3e-141 504.6 360 73.9
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 8.2e-141 504.2 357 72.8
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 1.1e-140 503.8 359 72.7
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.1e-140 503.8 359 72.7
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.4e-140 503.4 359 71.0
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.8e-140 503.1 349 73.6
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 3.1e-140 502.3 357 72.3
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 3.1e-140 502.3 360 72.8
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 3.1e-140 502.3 366 72.4
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 4.1e-140 501.9 370 70.8
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 4.1e-140 501.9 352 73.3
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 7.0e-140 501.1 359 72.1
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.0e-140 501.1 359 72.1
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.0e-140 501.1 359 72.1
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.0e-140 501.1 359 72.1
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 7.0e-140 501.1 330 76.4
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 9.1e-140 500.7 351 73.8
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.6e-139 500.0 361 71.2
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 2.0e-139 499.6 366 71.6
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 4.5e-139 498.4 367 72.5
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 7.7e-139 497.7 379 70.2
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 1.3e-138 496.9 333 75.1
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 2.2e-138 496.1 338 74.6
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 3.8e-138 495.4 370 70.8
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 3.8e-138 495.4 366 68.9
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 6.5e-138 494.6 361 71.2
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 1.5e-137 493.4 364 70.1
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 1.5e-137 493.4 364 70.1
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.9e-137 493.0 372 69.6
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 2.5e-137 492.7 356 71.9
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 4.2e-137 491.9 354 70.9
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 5.5e-137 491.5 364 70.3
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 9.4e-137 490.7 376 68.6
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 9.4e-137 490.7 368 69.3
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.2e-136 490.3 355 71.3
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 1.2e-136 490.3 331 73.1
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 1.6e-136 490.0 352 71.6
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 2.1e-136 489.6 358 71.2
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 2.1e-136 489.6 365 70.4
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 2.1e-136 489.6 370 70.0
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 4.7e-136 488.4 359 70.2
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.4e-135 486.9 356 70.8
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 1.8e-135 486.5 363 69.4
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 1.8e-135 486.5 349 71.3
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 2.3e-135 486.1 361 69.5
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 4.0e-135 485.3 334 73.7
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 5.2e-135 485.0 358 71.8
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 5.2e-135 485.0 348 71.3
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 1.2e-134 483.8 370 68.6
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.0e-134 483.0 377 66.6
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 2.6e-134 482.6 361 69.0
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.4e-134 482.3 366 68.6
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 1.3e-133 480.3 354 70.6
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.3e-133 480.3 344 71.2
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 1.7e-133 479.9 369 68.3
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 1.7e-133 479.9 369 68.3
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.2e-133 479.6 344 71.2
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 2.8e-133 479.2 362 68.5
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 2.8e-133 479.2 309 76.4
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 3.7e-133 478.8 356 69.4
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 4.8e-133 478.4 315 74.6
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 1.1e-132 477.2 349 69.1
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 1.1e-132 477.2 371 67.7
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.4e-132 476.9 344 70.9
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.8e-132 476.5 364 67.3
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 1.8e-132 476.5 363 68.6
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 2.4e-132 476.1 370 67.3
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 2.4e-132 476.1 328 72.0
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 2.4e-132 476.1 368 68.5
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 3.1e-132 475.7 346 71.4
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 1.2e-131 473.8 311 76.2
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 4.5e-131 471.9 317 72.9
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 1.7e-130 469.9 371 67.4
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 1.7e-130 469.9 362 67.7
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 5.0e-130 468.4 329 70.8
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.9e-129 466.5 371 67.1
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 1.9e-129 466.5 371 67.1
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 2.5e-129 466.1 359 66.9
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 4.2e-129 465.3 361 67.3
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 8.0e-128 461.1 348 68.7
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 1.8e-127 459.9 344 67.4
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 5.2e-127 458.4 371 65.0
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 3.7e-125 452.2 296 74.0
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 2.0e-123 446.4 451 55.9
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 3.8e-122 442.2 301 73.4
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 2.8e-120 436.0 337 64.1
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.8e-119 433.3 307 73.3
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 3.0e-119 432.6 340 66.2
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 3.4e-118 429.1 353 64.6
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 7.5e-118 427.9 317 70.3
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.7e-117 425.6 341 66.3
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 1.1e-116 424.1 319 64.6
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.6e-115 420.2 311 64.6
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.7e-114 416.8 343 62.1
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 1.1e-113 414.1 286 72.0
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 2.5e-113 412.9 370 61.6
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.5e-113 412.9 314 63.7
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 2.3e-111 406.4 295 71.2
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 8.9e-111 404.4 371 62.0
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 1.2e-110 404.1 314 66.2
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 6.0e-107 391.7 310 61.9
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 5.0e-106 388.7 259 74.9
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 7.3e-105 384.8 309 60.8
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.2e-104 384.0 349 59.0
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 2.6e-102 376.3 409 52.3
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 4.4e-102 375.6 336 58.9
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 1.2e-96 357.5 221 79.6
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 8.4e-93 344.7 365 55.6
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 2.7e-91 339.7 233 74.2
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 8.4e-85 318.2 298 53.7
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.1e-80 303.5 221 67.0
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 6.7e-74 282.0 239 64.4
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 9.0e-63 245.0 350 45.4
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 2.3e-58 230.3 150 74.7
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 4.8e-56 222.6 173 64.2
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 6.7e-50 202.2 183 62.3
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 1.1e-39 168.3 156 55.1
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 1.6e-30 137.9 90 75.6
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 3.0e-26 123.6 320 29.1
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.5e-25 121.3 335 28.1
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 5.7e-25 119.4 90 66.7
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.9e-20 104.4 234 33.8
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 1.4e-18 98.2 65 69.2
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 2.6e-17 94.0 337 26.7
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 9.8e-17 92.0 62 74.2
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 9.8e-17 92.0 62 74.2
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 2.2e-16 90.9 62 74.2
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.1e-15 88.6 397 24.4
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.4e-15 87.4 62 66.1
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.2e-14 85.1 53 73.6
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.2e-09 68.6 86 52.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 4.4e-09 66.6 39 76.9
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 2.8e-08 63.9 153 29.4
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.8e-08 63.9 88 48.9
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 9.2e-07 58.9 33 81.8
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 1.6e-06 58.2 33 78.8
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 2.0e-06 57.8 35 74.3
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 2.7e-06 57.4 31 83.9


User provided reference genes

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