Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0124061 Helianthus annuus HOM05D007781 ORTHO05D009769 7.3e-241 837.0 489 100.0
ECA236G0601 Erigeron canadensis HOM05D007781 ORTHO05D009769 1.4e-74 284.6 494 48.8
Lsat_1_v5_gn_7_21141 Lactuca sativa HOM05D007781 ORTHO05D009769 6.0e-70 269.2 627 43.9
Nn1g06568 Nelumbo nucifera HOM05D007781 ORTHO05D009769 5.7e-12 76.6 99 69.7
PGR042G1810 Punica granatum HOM05D007781 ORTHO05D009769 9.8e-12 75.9 116 62.1
Sc17g0006220 Simmondsia chinensis HOM05D007781 ORTHO05D009769 1.7e-11 75.1 119 58.0
Nitab4.5_0007940g0030 Nicotiana tabacum HOM05D007781 ORTHO05D009769 2.2e-11 74.7 96 69.8
Hund21227 Selenicereus undatus HOM05D007781 ORTHO05D009769 3.7e-11 73.9 90 73.3
Cc02_g13310 Coffea canephora HOM05D007781 ORTHO05D009769 6.4e-11 73.2 143 53.1
Nitab4.5_0003432g0040 Nicotiana tabacum HOM05D007781 ORTHO05D009769 6.4e-11 73.2 154 51.9
Sabra04G0026700 Salix brachista HOM05D007781 ORTHO05D009769 6.4e-11 73.2 82 79.3
Dinv40553 Davidia involucrata HOM05D007781 ORTHO05D009769 8.3e-11 72.8 87 73.6
Potri.004G043100 Populus trichocarpa HOM05D007781 ORTHO05D009769 8.3e-11 72.8 82 79.3
Actinidia05631 Actinidia chinensis HOM05D007781 ORTHO05D009769 1.1e-10 72.4 86 76.7
TAR627G0113 Trochodendron aralioides HOM05D007781 ORTHO05D009769 1.1e-10 72.4 82 78.0
Lalb_Chr16g0383721 Lupinus albus HOM05D007781 ORTHO05D009769 1.4e-10 72.0 86 73.3
Sopen02g023130 Solanum pennellii HOM05D007781 ORTHO05D009769 3.2e-10 70.9 156 51.9
Ciclev10017149m.g Citrus clementina HOM05D007781 ORTHO05D009769 4.1e-10 70.5 93 67.7
Hma1.2p1_0126F.1_g059410 Hydrangea macrophylla HOM05D007781 ORTHO05D009769 5.4e-10 70.1 98 66.3
Duzib235G1462 Durio zibethinus HOM05D007781 ORTHO05D009769 7.0e-10 69.7 113 57.5
MD05G1313200 Malus domestica HOM05D007781 ORTHO05D009769 7.0e-10 69.7 82 74.4
Prupe.4G046600 Prunus persica HOM05D007781 ORTHO05D009769 9.2e-10 69.3 115 61.7
GSVIVG01003209001 Vitis vinifera HOM05D007781 ORTHO05D009769 9.2e-10 69.3 94 69.1
CsaV3_1G012280 Cucumis sativus L. HOM05D007781 ORTHO05D009769 1.2e-09 68.9 108 61.1
CAN.G1164.27 Capsicum annuum HOM05D007781 ORTHO05D009769 1.6e-09 68.6 184 48.4
CiPaw.09G059400 Carya illinoinensis HOM05D007781 ORTHO05D009769 1.6e-09 68.6 113 61.9
DCAR_028076 Daucus carota HOM05D007781 ORTHO05D009769 2.0e-09 68.2 390 23.8
MD10G1295400 Malus domestica HOM05D007781 ORTHO05D009769 2.0e-09 68.2 140 51.4
Thecc.06G188400 Theobroma cacao HOM05D007781 ORTHO05D009769 2.0e-09 68.2 82 72.0
Haze_06475 Corylus avellana HOM05D007781 ORTHO05D009769 2.7e-09 67.8 82 73.2
Lj4g0009430 Lotus japonicus HOM05D007781 ORTHO05D009769 2.7e-09 67.8 97 63.9
Os01g0612700 Oryza sativa ssp. japonica HOM05D021202 ORTHO05D009769 2.7e-09 67.8 172 47.7
Sed0016416 Sechium edule HOM05D007781 ORTHO05D009769 2.7e-09 67.8 88 73.9
Solyc02g078270.3 Solanum lycopersicum HOM05D007781 ORTHO05D009769 5.9e-09 66.6 180 45.6
CARHR228320 Cardamine hirsuta HOM05D007781 ORTHO05D009769 7.8e-09 66.2 101 61.4
Peaxi162Scf00736g00429 Petunia axillaris HOM05D007781 ORTHO05D009769 7.8e-09 66.2 85 44.7
TWI38G0207 Tripterygium wilfordii HOM05D007781 ORTHO05D009769 1.0e-08 65.9 67 49.3
RcHm_v2.0_Chr5g0008291 Rosa chinensis HOM05D007781 ORTHO05D009769 1.3e-08 65.5 82 70.7
PGSC0003DMG400029720 Solanum tuberosum HOM05D007781 ORTHO05D009769 1.3e-08 65.5 132 55.3
Gohir.A05G161900 Gossypium hirsutum HOM05D007781 ORTHO05D009769 1.7e-08 65.1 82 68.3
Gohir.D05G164700 Gossypium hirsutum HOM05D007781 ORTHO05D009769 1.7e-08 65.1 82 68.3
Gorai.009G169900 Gossypium raimondii HOM05D007781 ORTHO05D009769 1.7e-08 65.1 82 68.3
Glyma.07G196200 Glycine max HOM05D007781 ORTHO05D009769 2.3e-08 64.7 84 69.0
Manes.16G027000 Manihot esculenta HOM05D007781 ORTHO05D009769 2.3e-08 64.7 82 74.4
THA.LOC104812795 Tarenaya hassleriana HOM05D007781 ORTHO05D009769 3.0e-08 64.3 85 71.8
TPR.G12128 Trifolium pratense HOM05D007781 ORTHO05D009769 3.0e-08 64.3 84 69.0
HPP92_027869 Vanilla planifolia HOM05D007781 ORTHO05D009769 3.0e-08 64.3 141 35.5
Ah.14g089440 Amaranthus hybridus HOM05D007781 ORTHO05D009769 5.0e-08 63.5 43 62.8
COL.COLO4_31480 Corchorus olitorius HOM05D007781 ORTHO05D009769 5.0e-08 63.5 83 63.9
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 6.6e-08 63.2 82 78.0
A08p15070 Brassica napus HOM05D007781 ORTHO05D009769 6.6e-08 63.2 82 74.4
C03p83160 Brassica napus HOM05D001541 ORTHO05D009769 6.6e-08 63.2 82 74.4
Psat7g113680 Pisum sativum HOM05D007781 ORTHO05D009769 6.6e-08 63.2 95 62.1
CSS0040858 Camellia sinensis var. sinensis HOM05D007781 ORTHO05D009769 8.6e-08 62.8 36 75.0
FvH4_3g09310 Fragaria vesca HOM05D007781 ORTHO05D009769 1.1e-07 62.4 82 69.5
FAN11G2776 Fragaria x ananassa HOM05D007781 ORTHO05D009769 1.1e-07 62.4 82 69.5
FAN16G0963 Fragaria x ananassa HOM05D007781 ORTHO05D009769 1.1e-07 62.4 82 69.5
FAN21G0375 Fragaria x ananassa HOM05D007781 ORTHO05D009769 1.1e-07 62.4 82 69.5
Phvul.002G234100 Phaseolus vulgaris HOM05D007781 ORTHO05D009769 1.1e-07 62.4 84 66.7
Sp7g19740 Schrenkiella parvula HOM05D007781 ORTHO05D009769 1.5e-07 62.0 36 72.2
Eucgr.E03314 Eucalyptus grandis HOM05D007781 ORTHO05D009769 1.9e-07 61.6 117 55.6
Thhalv10026412m.g Eutrema salsugineum HOM05D007781 ORTHO05D009769 1.9e-07 61.6 89 68.5
VMungo0251G3178 Vigna mungo HOM05D007781 ORTHO05D009769 2.5e-07 61.2 84 66.7
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 3.3e-07 60.8 82 75.6
BolC3t20599H Brassica oleracea HOM05D007781 ORTHO05D009769 3.3e-07 60.8 82 75.6
MELO3C002600.2 Cucumis melo HOM05D007781 ORTHO05D009769 3.3e-07 60.8 127 54.3
ClCG03G006020 Citrullus lanatus HOM05D007781 ORTHO05D009769 4.3e-07 60.5 113 58.4
AL7G32390 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.6e-07 60.1 101 60.4
AT4G21610 Arabidopsis thaliana HOM05D007781 ORTHO05D009769 5.6e-07 60.1 101 61.4
CANSAT35G1759 Cannabis sativa HOM05D007781 ORTHO05D009769 5.6e-07 60.1 89 66.3
CDE10G1000 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 9.5e-07 59.3 164 47.6
Carub.0007s1977 Capsella rubella HOM05D007781 ORTHO05D009769 1.2e-06 58.9 47 59.6
arahy.Tifrunner.gnm1.ann1.QC0LUE Arachis hypogaea HOM05D007781 ORTHO05D009769 1.6e-06 58.5 118 53.4
arahy.Tifrunner.gnm1.ann1.KV0YZV Arachis hypogaea HOM05D007781 ORTHO05D009769 2.8e-06 57.8 118 53.4
Oeu053970.1 Olea europaea HOM05D007781 ORTHO05D009769 2.8e-06 57.8 94 59.6
PSO541G0656 Papaver somniferum HOM05D007781 ORTHO05D009769 4.7e-06 57.0 85 68.2
Aa31LG6G3610 Aethionema arabicum HOM05D007781 ORTHO05D009769 8.0e-06 56.2 171 43.9


User provided reference genes

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