Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0123901 Helianthus annuus HOM05D000296 ORTHO05D000175 1.5e-35 152.5 89 100.0
HanXRQChr17g0535761 Helianthus annuus HOM05D000296 ORTHO05D000175 5.4e-17 90.9 111 53.2
ECA246G0421 Erigeron canadensis HOM05D000296 ORTHO05D000175 4.7e-13 77.8 113 45.1
HanXRQChr06g0167301 Helianthus annuus HOM05D000296 ORTHO05D000175 3.0e-12 75.1 113 43.4
ECA233G5577 Erigeron canadensis HOM05D000296 ORTHO05D000175 1.3e-10 69.7 105 41.9
Lsat_1_v5_gn_3_16460 Lactuca sativa HOM05D000296 ORTHO05D000175 1.8e-09 65.9 113 42.5
vmacro00346 Vaccinium macrocarpon HOM05D000296 ORTHO05D000175 7.0e-09 63.9 102 41.2
Lalb_Chr09g0323921 Lupinus albus HOM05D000296 ORTHO05D000175 2.0e-08 62.4 105 37.1
Lj2A244G67 Lonicera japonica HOM05D000296 ORTHO05D000175 2.7e-08 62.0 103 38.8
Dinv25190 Davidia involucrata HOM05D000296 ORTHO05D000175 3.5e-08 61.6 109 38.5
Hma1.2p1_0414F.1_g147810 Hydrangea macrophylla HOM05D000296 ORTHO05D000175 3.5e-08 61.6 86 43.0
Hma1.2p1_2066F.1_g313060 Hydrangea macrophylla HOM05D000296 ORTHO05D000175 3.5e-08 61.6 86 43.0
arahy.Tifrunner.gnm1.ann1.LGR8BT Arachis hypogaea HOM05D000296 ORTHO05D000175 5.9e-08 60.8 103 35.9
arahy.Tifrunner.gnm1.ann1.P6RGT7 Arachis hypogaea HOM05D000296 ORTHO05D000175 5.9e-08 60.8 103 35.9
Glyma.11G041600 Glycine max HOM05D000296 ORTHO05D000175 1.0e-07 60.1 103 37.9
Phvul.002G005300 Phaseolus vulgaris HOM05D000296 ORTHO05D000175 1.0e-07 60.1 103 37.9
Nn6g33647 Nelumbo nucifera HOM05D000296 ORTHO05D000175 1.7e-07 59.3 96 37.5
TPR.G19185 Trifolium pratense HOM05D000296 ORTHO05D000175 1.7e-07 59.3 103 35.0
Actinidia25948 Actinidia chinensis HOM05D000296 ORTHO05D000175 2.3e-07 58.9 104 36.5
Rhsim11G0011700 Rhododendron simsii HOM05D000296 ORTHO05D000175 2.3e-07 58.9 99 37.4
Atru.chr6.1766 Acer truncatum HOM05D000296 ORTHO05D000175 2.9e-07 58.5 103 35.9
CiPaw.12G060900 Carya illinoinensis HOM05D000296 ORTHO05D000175 2.9e-07 58.5 103 36.9
Haze_08291 Corylus avellana HOM05D000296 ORTHO05D000175 2.9e-07 58.5 103 36.9
TWI81G0495 Tripterygium wilfordii HOM05D000296 ORTHO05D000175 2.9e-07 58.5 103 35.9
Glyma.05G070400 Glycine max HOM05D000296 ORTHO05D000175 3.9e-07 58.2 103 36.9
arahy.Tifrunner.gnm1.ann1.078CEZ Arachis hypogaea HOM05D000296 ORTHO05D000175 5.0e-07 57.8 105 34.3
Dinv28922 Davidia involucrata HOM05D000296 ORTHO05D000175 5.0e-07 57.8 103 36.9
ATR0049G057 Amborella trichopoda HOM05D000296 ORTHO05D000175 6.6e-07 57.4 92 39.1
Cfa012393 Carpinus fangiana HOM05D000296 ORTHO05D000175 6.6e-07 57.4 103 35.9
Glyma.01G200466 Glycine max HOM05D000296 ORTHO05D000175 6.6e-07 57.4 103 36.9
PSO063G6783 Papaver somniferum HOM05D000296 ORTHO05D000175 6.6e-07 57.4 112 35.7
PSO782G3595 Papaver somniferum HOM05D000296 ORTHO05D000175 6.6e-07 57.4 112 35.7
TWI15G0864 Tripterygium wilfordii HOM05D000296 ORTHO05D000175 6.6e-07 57.4 103 35.9
Actinidia03390 Actinidia chinensis HOM05D000296 ORTHO05D000175 8.6e-07 57.0 102 36.3
Lj2A245G33 Lonicera japonica HOM05D000296 ORTHO05D000175 8.6e-07 57.0 103 35.0
Lj8A289T62 Lonicera japonica HOM05D000296 ORTHO05D000175 8.6e-07 57.0 90 37.8
Cpa.g.sc6.430 Carica papaya HOM05D000296 ORTHO05D000175 1.1e-06 56.6 91 38.5
Ciclev10030898m.g Citrus clementina HOM05D000296 ORTHO05D000175 1.1e-06 56.6 109 35.8
Gohir.A09G198200 Gossypium hirsutum HOM05D000296 ORTHO05D000175 1.1e-06 56.6 108 36.1
Peaxi162Scf00312g00614 Petunia axillaris HOM05D000296 ORTHO05D000175 1.1e-06 56.6 91 39.6
CSS0034002 Camellia sinensis var. sinensis HOM05D000296 ORTHO05D000175 1.5e-06 56.2 117 34.2
Ca_24637_v3 Cicer arietinum L. HOM05D000296 ORTHO05D000175 1.5e-06 56.2 110 38.2
Gohir.D09G192800 Gossypium hirsutum HOM05D000296 ORTHO05D000175 1.5e-06 56.2 109 35.8
VMungo1215G0098 Vigna mungo HOM05D000296 ORTHO05D000175 1.5e-06 56.2 102 36.3
Actinidia09232 Actinidia chinensis HOM05D000296 ORTHO05D000175 1.9e-06 55.8 105 35.2
Lalb_Chr05g0220641 Lupinus albus HOM05D000296 ORTHO05D000175 2.5e-06 55.5 96 35.4
GSVIVG01013237001 Vitis vinifera HOM05D000296 ORTHO05D000175 2.5e-06 55.5 103 36.9
Aqoxy3G02493 Aquilegia oxysepala HOM05D000296 ORTHO05D000175 3.3e-06 55.1 103 34.0
Lj4g0005127 Lotus japonicus HOM05D000296 ORTHO05D000175 3.3e-06 55.1 101 33.7
FvH4_5g21310 Fragaria vesca HOM05D000296 ORTHO05D000175 4.3e-06 54.7 102 36.3
FAN04G0319 Fragaria x ananassa HOM05D000296 ORTHO05D000175 4.3e-06 54.7 102 36.3
FAN13G2962 Fragaria x ananassa HOM05D000296 ORTHO05D000175 4.3e-06 54.7 102 36.3
FAN18G2987 Fragaria x ananassa HOM05D000296 ORTHO05D000175 4.3e-06 54.7 102 36.3
Nn1g00596 Nelumbo nucifera HOM05D000001 ORTHO05D000175 4.3e-06 54.7 103 35.0
arahy.Tifrunner.gnm1.ann1.RR9WYE Arachis hypogaea HOM05D000296 ORTHO05D000175 5.6e-06 54.3 98 34.7
Potri.001G145900 Populus trichocarpa HOM05D000296 ORTHO05D000175 5.6e-06 54.3 98 35.7
TPR.G19195 Trifolium pratense HOM05D000296 ORTHO05D000175 5.6e-06 54.3 101 34.7
Ca_22055_v3 Cicer arietinum L. HOM05D000296 ORTHO05D000175 7.3e-06 53.9 109 31.2
QL12p006886 Quercus lobata HOM05D000296 ORTHO05D000175 7.3e-06 53.9 105 35.2
RcHm_v2.0_Chr7g0208651 Rosa chinensis HOM05D000296 ORTHO05D000175 7.3e-06 53.9 107 37.4


User provided reference genes

Program Settings