Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 1.8e-97 359.4 194 100.0
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 1.1e-35 154.1 114 76.3
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 6.8e-33 144.8 112 63.4
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 2.0e-32 143.3 114 69.3
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 2.0e-32 143.3 116 69.8
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 1.3e-31 140.6 101 78.2
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 1.7e-31 140.2 117 68.4
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 3.7e-31 139.0 119 58.8
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 3.7e-31 139.0 119 69.7
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 6.4e-31 138.3 121 67.8
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.1e-30 137.5 119 71.4
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 1.1e-30 137.5 119 70.6
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 1.4e-30 137.1 113 69.0
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 9.2e-30 134.4 114 61.4
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 9.2e-30 134.4 113 71.7
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 1.6e-29 133.7 120 67.5
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 1.6e-29 133.7 114 61.4
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 2.7e-29 132.9 119 63.9
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 3.5e-29 132.5 117 68.4
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 3.5e-29 132.5 114 61.4
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 3.5e-29 132.5 125 61.6
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 3.5e-29 132.5 119 60.5
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 4.6e-29 132.1 116 64.7
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 4.6e-29 132.1 116 69.0
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 6.0e-29 131.7 115 69.6
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 1.3e-28 130.6 115 67.0
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 1.7e-28 130.2 113 69.9
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 2.3e-28 129.8 119 67.2
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 3.9e-28 129.0 111 66.7
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 5.1e-28 128.6 116 61.2
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 5.1e-28 128.6 113 65.5
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 6.6e-28 128.3 118 65.3
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 6.6e-28 128.3 113 63.7
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 8.6e-28 127.9 116 68.1
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 1.1e-27 127.5 121 67.8
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 1.5e-27 127.1 118 62.7
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 1.5e-27 127.1 116 68.1
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 1.5e-27 127.1 112 63.4
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 1.5e-27 127.1 125 59.2
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.9e-27 126.7 115 62.6
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 2.5e-27 126.3 116 65.5
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 3.3e-27 125.9 113 58.4
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 3.3e-27 125.9 116 62.9
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 4.3e-27 125.6 116 58.6
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 4.3e-27 125.6 113 59.3
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 5.6e-27 125.2 116 57.8
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 5.6e-27 125.2 114 60.5
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 9.5e-27 124.4 116 57.8
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 9.5e-27 124.4 116 57.8
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 1.6e-26 123.6 116 61.2
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.6e-26 123.6 116 58.6
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 2.1e-26 123.2 114 63.2
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 2.1e-26 123.2 114 63.2
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 2.8e-26 122.9 114 56.1
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 3.6e-26 122.5 116 56.9
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 3.6e-26 122.5 116 56.9
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 4.7e-26 122.1 121 62.8
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 4.7e-26 122.1 115 64.3
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 6.2e-26 121.7 116 56.0
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 6.2e-26 121.7 116 64.7
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 1.1e-25 120.9 116 59.5
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 1.1e-25 120.9 119 64.7
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 1.8e-25 120.2 116 54.3
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 1.8e-25 120.2 116 54.3
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 1.8e-25 120.2 116 54.3
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 1.8e-25 120.2 116 54.3
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 1.8e-25 120.2 116 54.3
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 1.8e-25 120.2 114 64.9
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 3.1e-25 119.4 114 56.1
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 3.1e-25 119.4 117 62.4
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 3.1e-25 119.4 118 59.3
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 6.8e-25 118.2 112 63.4
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 6.8e-25 118.2 112 63.4
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 6.8e-25 118.2 116 54.3
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 8.9e-25 117.9 115 63.5
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.5e-24 117.1 116 54.3
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.5e-24 117.1 116 54.3
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 1.5e-24 117.1 116 59.5
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 2.0e-24 116.7 114 62.3
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.6e-24 116.3 110 61.8
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.6e-24 116.3 110 61.8
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 2.6e-24 116.3 125 60.0
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 4.4e-24 115.5 116 54.3
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 4.4e-24 115.5 101 59.4
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 5.8e-24 115.2 113 61.1
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 5.8e-24 115.2 112 64.3
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 5.8e-24 115.2 112 60.7
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 5.8e-24 115.2 112 57.1
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 7.6e-24 114.8 112 59.8
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 9.9e-24 114.4 113 53.1
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 9.9e-24 114.4 113 62.8
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 1.7e-23 113.6 111 63.1
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 1.7e-23 113.6 112 62.5
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 1.7e-23 113.6 112 65.2
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 2.2e-23 113.2 117 60.7
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 3.8e-23 112.5 100 66.0
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 6.4e-23 111.7 105 64.8
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 1.1e-22 110.9 119 55.5
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 1.4e-22 110.5 122 59.0
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 2.4e-22 109.8 112 58.9
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 3.2e-22 109.4 115 56.5
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 3.2e-22 109.4 115 59.1
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 3.2e-22 109.4 112 59.8
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 5.4e-22 108.6 101 66.3
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 5.4e-22 108.6 114 60.5
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 7.1e-22 108.2 103 65.0
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 7.1e-22 108.2 114 59.6
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 9.2e-22 107.8 123 55.3
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 1.2e-21 107.5 105 58.1
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 1.2e-21 107.5 105 64.8
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.6e-21 107.1 113 53.1
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 1.6e-21 107.1 113 59.3
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 2.1e-21 106.7 113 60.2
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.7e-21 106.3 110 57.3
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.7e-21 106.3 110 57.3
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 3.5e-21 105.9 111 58.6
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 3.5e-21 105.9 120 56.7
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 4.6e-21 105.5 103 61.2
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 4.6e-21 105.5 103 61.2
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 4.6e-21 105.5 115 58.3
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 4.6e-21 105.5 104 65.4
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 4.6e-21 105.5 101 56.4
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 6.0e-21 105.1 103 59.2
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 6.0e-21 105.1 114 58.8
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 6.0e-21 105.1 111 58.6
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 6.0e-21 105.1 111 58.6
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 6.0e-21 105.1 111 58.6
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 6.0e-21 105.1 120 56.7
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 1.0e-20 104.4 114 49.1
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.0e-20 104.4 102 57.8
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 1.3e-20 104.0 105 55.2
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 1.7e-20 103.6 114 49.1
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 1.7e-20 103.6 102 62.7
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 2.3e-20 103.2 114 48.2
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 2.3e-20 103.2 114 48.2
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 3.0e-20 102.8 111 51.4
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 3.0e-20 102.8 102 64.7
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 3.9e-20 102.4 111 52.3
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 3.9e-20 102.4 111 52.3
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 3.9e-20 102.4 111 52.3
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 6.6e-20 101.7 114 48.2
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 1.5e-19 100.5 104 51.9
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 1.5e-19 100.5 114 52.6
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.5e-19 100.5 114 46.5
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.9e-19 100.1 114 47.4
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 1.9e-19 100.1 113 47.8
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 1.9e-19 100.1 107 59.8
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 3.3e-19 99.4 101 50.5
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 3.3e-19 99.4 113 47.8
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 4.3e-19 99.0 113 46.9
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 4.3e-19 99.0 114 45.6
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 7.3e-19 98.2 115 53.9
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 1.2e-18 97.4 105 60.0
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 1.2e-18 97.4 113 55.8
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.1e-18 96.7 115 53.0
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 4.7e-18 95.5 100 58.0
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 6.2e-18 95.1 118 56.8
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 1.1e-17 94.4 107 58.9
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 1.4e-17 94.0 121 52.1
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 1.8e-17 93.6 106 56.6
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 3.1e-17 92.8 104 58.7
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 4.0e-17 92.4 132 47.0
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 6.9e-17 91.7 100 56.0
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 1.2e-16 90.9 84 67.9
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 4.4e-16 89.0 103 47.6
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 9.9e-16 87.8 55 74.5
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 3.8e-15 85.9 118 48.3
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 6.4e-15 85.1 100 50.0
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 2.4e-14 83.2 102 44.1
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 9.3e-14 81.3 105 51.4
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 7.3e-11 71.6 91 45.1
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 7.3e-11 71.6 145 31.7
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 2.1e-10 70.1 98 40.8
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 4.5e-08 62.4 87 42.5
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 4.5e-08 62.4 135 31.9
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 2.9e-07 59.7 152 30.9
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 6.4e-07 58.5 145 29.7
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis HOM05D003630 ORTHO05D004151 8.4e-07 58.2 45 55.6
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 1.4e-06 57.4 112 35.7


User provided reference genes

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