Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 2.4e-81 305.4 157 100.0
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 4.0e-68 261.5 157 83.4
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 4.8e-61 238.0 157 74.5
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 7.9e-48 194.1 157 63.7
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 3.0e-47 192.2 158 63.9
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 5.1e-47 191.4 150 64.0
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 6.7e-47 191.0 158 63.3
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 3.3e-46 188.7 156 60.3
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 4.4e-46 188.3 158 62.0
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 9.7e-46 187.2 156 58.3
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 2.8e-45 185.7 157 59.9
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 2.8e-45 185.7 158 61.4
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 2.8e-45 185.7 157 59.9
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 6.3e-45 184.5 161 61.5
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 1.1e-44 183.7 147 62.6
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 1.8e-44 183.0 158 61.4
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 1.8e-44 183.0 156 57.7
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 4.1e-44 181.8 148 62.8
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 4.1e-44 181.8 159 58.5
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 4.1e-44 181.8 155 60.0
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 5.3e-44 181.4 159 57.2
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 9.1e-44 180.6 157 59.9
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 1.2e-43 180.3 147 66.0
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.5e-43 179.9 158 58.2
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.5e-43 179.9 158 58.2
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 2.6e-43 179.1 158 58.2
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 2.6e-43 179.1 143 64.3
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 2.6e-43 179.1 157 56.1
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 2.6e-43 179.1 159 56.0
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 3.4e-43 178.7 156 57.1
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 3.4e-43 178.7 156 57.1
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 3.4e-43 178.7 155 58.7
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 7.7e-43 177.6 159 56.0
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 1.0e-42 177.2 158 56.3
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 1.0e-42 177.2 161 54.0
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 1.3e-42 176.8 159 56.0
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 1.3e-42 176.8 155 57.4
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 1.7e-42 176.4 159 56.6
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 2.2e-42 176.0 159 56.0
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 2.2e-42 176.0 159 56.0
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 2.2e-42 176.0 157 58.6
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 2.9e-42 175.6 158 57.0
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 3.8e-42 175.3 157 58.6
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 5.0e-42 174.9 156 59.0
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 8.5e-42 174.1 159 55.3
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 8.5e-42 174.1 175 53.1
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.9e-41 172.9 145 58.6
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 1.9e-41 172.9 154 59.7
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 2.5e-41 172.6 152 57.9
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.5e-41 172.6 156 58.3
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 3.2e-41 172.2 156 57.7
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 4.2e-41 171.8 152 58.6
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 4.2e-41 171.8 158 57.0
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 5.5e-41 171.4 131 65.6
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 5.5e-41 171.4 156 57.7
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 9.4e-41 170.6 158 53.8
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 1.2e-40 170.2 145 60.7
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 1.6e-40 169.9 159 53.5
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.6e-40 169.9 156 57.1
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 1.6e-40 169.9 157 52.9
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 3.6e-40 168.7 162 53.7
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 3.6e-40 168.7 149 58.4
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 4.7e-40 168.3 160 54.4
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 4.7e-40 168.3 157 56.1
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 4.7e-40 168.3 158 54.4
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 6.1e-40 167.9 157 53.5
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 7.9e-40 167.5 158 54.4
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 1.4e-39 166.8 159 55.3
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 1.8e-39 166.4 157 53.5
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 1.8e-39 166.4 158 54.4
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 3.0e-39 165.6 148 56.8
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 5.2e-39 164.9 154 53.9
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 5.2e-39 164.9 150 57.3
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 8.8e-39 164.1 152 55.9
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 1.1e-38 163.7 150 55.3
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 1.1e-38 163.7 157 52.2
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 2.0e-38 162.9 145 56.6
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 2.6e-38 162.5 146 57.5
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 2.6e-38 162.5 159 53.5
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 3.3e-38 162.2 147 55.8
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 3.3e-38 162.2 155 54.2
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 5.7e-38 161.4 132 61.4
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 7.4e-38 161.0 151 55.0
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 7.4e-38 161.0 150 54.7
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 7.4e-38 161.0 155 52.9
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 9.7e-38 160.6 161 53.4
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.3e-37 160.2 154 53.2
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 1.3e-37 160.2 150 54.7
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 2.8e-37 159.1 152 53.3
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 4.8e-37 158.3 158 51.9
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 6.3e-37 157.9 146 54.1
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 4.1e-36 155.2 158 51.9
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 5.3e-36 154.8 146 53.4
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 2.6e-35 152.5 146 52.7
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 4.5e-35 151.8 148 52.7
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 7.7e-35 151.0 153 51.6
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 2.2e-34 149.4 182 47.3
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 6.5e-34 147.9 139 51.8
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 3.2e-25 119.0 126 52.4
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 1.0e-23 114.0 112 50.9
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 3.4e-22 109.0 158 39.2
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 2.2e-21 106.3 160 40.0
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 1.8e-20 103.2 98 48.0
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 7.0e-20 101.3 72 62.5
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 2.7e-19 99.4 69 71.0
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 2.7e-19 99.4 69 71.0
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 2.3e-18 96.3 69 68.1
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 6.5e-18 94.7 148 35.8
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 3.3e-17 92.4 73 64.4
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 3.0e-15 85.9 131 35.1
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 5.2e-15 85.1 132 38.6
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 4.4e-14 82.0 141 29.1
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 5.7e-14 81.6 114 36.0
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 1.3e-13 80.5 134 29.1
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 1.0e-07 60.8 134 30.6


User provided reference genes

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