Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 0.0e+00 1145.6 651 100.0
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 4.8e-216 755.0 662 69.3
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 6.6e-189 664.8 680 60.6
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.3e-181 640.6 569 67.5
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 4.7e-179 632.1 655 58.0
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.8e-178 630.2 673 58.4
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 4.0e-178 629.0 647 61.1
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 3.4e-177 625.9 683 58.9
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 7.1e-175 618.2 681 55.2
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 3.5e-174 615.9 667 54.0
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 8.6e-173 611.3 690 56.2
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 8.6e-173 611.3 666 58.4
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 1.5e-172 610.5 679 53.0
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 3.3e-172 609.4 691 57.0
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 7.3e-172 608.2 691 57.0
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 5.2e-170 602.1 680 57.1
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 5.2e-170 602.1 734 52.9
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 8.9e-170 601.3 659 56.3
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 2.6e-169 599.7 664 57.5
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.4e-167 594.0 661 59.8
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 7.8e-166 588.2 679 56.8
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 5.1e-165 585.5 669 55.5
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 8.6e-165 584.7 674 55.8
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 1.5e-164 583.9 671 53.8
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.5e-164 583.9 680 53.1
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 3.3e-164 582.8 686 50.7
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 4.3e-164 582.4 647 55.8
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 3.6e-163 579.3 668 53.3
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 6.2e-163 578.6 673 55.6
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 8.1e-163 578.2 656 54.6
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.4e-162 576.6 674 55.5
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 6.9e-162 575.1 685 54.9
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 9.0e-162 574.7 688 54.4
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 4.4e-161 572.4 675 56.9
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 1.3e-160 570.9 659 53.3
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 1.3e-160 570.9 521 61.0
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 2.9e-160 569.7 693 56.6
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 6.4e-160 568.5 668 55.1
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 1.9e-159 567.0 694 53.5
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 1.9e-159 567.0 673 55.0
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 3.2e-159 566.2 669 55.5
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 7.1e-159 565.1 526 59.1
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 1.6e-158 563.9 649 54.9
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 2.1e-158 563.5 691 58.3
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 3.5e-158 562.8 658 52.3
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 4.6e-158 562.4 515 59.0
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 5.1e-157 558.9 675 54.7
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 8.7e-157 558.1 704 52.3
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 1.3e-155 554.3 664 53.5
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 2.8e-155 553.1 687 54.3
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 4.8e-155 552.4 687 51.1
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 4.8e-155 552.4 700 53.4
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 8.1e-155 551.6 660 52.1
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 1.8e-154 550.4 676 49.4
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 3.1e-154 549.7 653 57.0
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 4.0e-154 549.3 681 50.5
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 6.9e-154 548.5 682 56.0
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 2.6e-153 546.6 650 53.1
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.2e-151 539.7 668 54.6
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 3.2e-151 539.7 521 57.8
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 5.4e-151 538.9 675 50.8
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 7.9e-150 535.0 667 55.9
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 3.9e-149 532.7 687 51.7
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 1.3e-147 527.7 675 49.8
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 3.7e-147 526.2 675 50.5
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 4.8e-147 525.8 647 55.8
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.8e-146 523.9 684 54.1
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 2.4e-146 523.5 679 51.3
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.0e-145 520.4 643 55.8
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 7.6e-145 518.5 576 53.3
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 1.1e-143 514.6 666 55.1
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 5.5e-143 512.3 652 55.4
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 6.0e-142 508.8 523 54.5
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 1.0e-141 508.1 679 52.1
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 3.3e-140 503.1 683 47.0
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 4.3e-140 502.7 665 49.3
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.1e-139 500.4 529 55.4
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 3.7e-139 499.6 655 48.4
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 1.1e-138 498.0 529 55.2
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 1.4e-138 497.7 529 55.0
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 5.3e-138 495.7 654 55.0
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 3.8e-136 489.6 567 55.4
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 4.2e-135 486.1 672 46.9
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.8e-133 480.7 622 49.2
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 1.5e-132 477.6 519 52.4
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 6.3e-131 472.2 679 49.8
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 2.6e-129 466.8 523 50.9
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 1.3e-128 464.5 517 50.3
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 1.9e-127 460.7 515 51.8
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.8e-125 454.1 469 55.2
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 2.3e-125 453.8 526 51.3
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 3.3e-124 449.9 679 41.5
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 3.7e-123 446.4 576 55.6
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 6.5e-120 435.6 495 51.7
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 6.5e-120 435.6 495 51.7
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 4.7e-118 429.5 508 50.0
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 2.3e-117 427.2 495 50.1
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 9.7e-116 421.8 584 52.1
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.7e-97 360.5 535 43.6
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 1.5e-92 344.7 364 51.1
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 4.8e-91 339.7 606 43.9
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 1.6e-89 334.7 684 39.9
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 2.7e-89 334.0 518 42.1
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 5.5e-87 326.2 364 48.4
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 8.6e-64 249.2 309 49.2
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 1.8e-61 241.5 220 55.9
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 3.2e-58 230.7 529 34.0
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 8.1e-54 216.1 493 34.3
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 4.3e-47 193.7 232 48.7
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 7.1e-34 149.8 320 32.2
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 1.3e-30 139.0 573 29.0
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 1.6e-22 112.1 167 44.3
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 3.9e-16 90.9 186 59.1
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 3.2e-10 71.2 51 58.8
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 2.2e-06 58.5 90 40.0
HanXRQChr13g0425831 Helianthus annuus HOM05D006822 ORTHO05D226009 2.2e-06 58.5 39 76.9


User provided reference genes

Program Settings