Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0120361 Helianthus annuus HOM05D007199 ORTHO05D007257 9.1e-142 506.9 259 100.0
ECA236G3069 Erigeron canadensis HOM05D007199 ORTHO05D007257 7.1e-62 241.5 274 58.0
Lsat_1_v5_gn_7_2960 Lactuca sativa HOM05D002069 ORTHO05D001421 6.5e-47 191.8 212 54.7
Lsat_1_v5_gn_4_32721 Lactuca sativa HOM05D007199 ORTHO05D007257 1.3e-42 177.6 268 46.3
HanXRQChr16g0524641 Helianthus annuus HOM05D007199 ORTHO05D007257 1.5e-30 137.5 251 44.2
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 2.2e-26 123.6 260 41.9
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 4.7e-21 105.9 273 35.2
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 1.4e-20 104.4 257 33.9
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 1.8e-20 104.0 273 37.7
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 2.3e-20 103.6 275 34.2
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 5.2e-20 102.4 288 32.3
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 1.5e-19 100.9 262 36.6
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 2.6e-19 100.1 267 33.0
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 3.4e-19 99.8 275 34.5
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 3.4e-19 99.8 283 30.0
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 5.7e-19 99.0 290 29.3
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 7.5e-19 98.6 260 33.5
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 7.5e-19 98.6 280 35.0
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 1.7e-18 97.4 269 32.7
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 3.7e-18 96.3 268 38.1
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 6.3e-18 95.5 279 29.7
MSTRG.17369 Avicennia marina HOM05D007199 ORTHO05D007257 8.3e-18 95.1 257 38.1
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 8.3e-18 95.1 271 35.1
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 1.1e-17 94.7 261 30.3
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 1.1e-17 94.7 261 30.3
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 1.4e-17 94.4 274 33.2
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 4.1e-17 92.8 285 34.4
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 4.1e-17 92.8 274 33.6
CARHR141980 Cardamine hirsuta HOM05D012720 ORTHO05D007257 5.4e-17 92.4 261 31.8
Gohir.A11G099400 Gossypium hirsutum HOM05D007199 ORTHO05D007257 5.4e-17 92.4 271 34.3
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 5.4e-17 92.4 268 34.7
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 9.1e-17 91.7 274 36.1
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 1.2e-16 91.3 268 34.3
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 3.5e-16 89.7 267 33.7
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 3.5e-16 89.7 287 32.8
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 3.5e-16 89.7 267 33.7
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 5.9e-16 89.0 274 32.8
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 5.9e-16 89.0 274 32.8
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 5.9e-16 89.0 271 34.3
Atru.chr5.734 Acer truncatum HOM05D007199 ORTHO05D007257 7.7e-16 88.6 264 37.9
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 1.0e-15 88.2 291 29.6
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 1.3e-15 87.8 280 32.1
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 1.7e-15 87.4 284 33.8
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 2.3e-15 87.0 276 31.9
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 2.9e-15 86.7 283 34.3
Lalb_Chr15g0076391 Lupinus albus HOM05D007199 ORTHO05D007257 5.0e-15 85.9 272 31.6
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 1.5e-14 84.3 280 31.4
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 1.9e-14 84.0 266 32.0
Rhsim01G0176600 Rhododendron simsii HOM05D007199 ORTHO05D007257 2.5e-14 83.6 264 32.6
Actinidia28100 Actinidia chinensis HOM05D007199 ORTHO05D007257 3.3e-14 83.2 247 30.8
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 3.3e-14 83.2 289 32.2
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 4.2e-14 82.8 272 30.5
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 5.5e-14 82.4 269 31.2
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 7.2e-14 82.0 264 28.8
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 9.5e-14 81.6 282 33.7
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 1.6e-13 80.9 254 33.5
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 1.6e-13 80.9 295 30.2
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 2.1e-13 80.5 288 30.6
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 2.1e-13 80.5 265 29.4
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 2.8e-13 80.1 278 33.1
Lj9C602T4 Lonicera japonica HOM05D007199 ORTHO05D007257 3.6e-13 79.7 221 33.0
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 3.6e-13 79.7 258 30.2
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 8.0e-13 78.6 301 32.2
Carub.0004s2935 Capsella rubella HOM05D012720 ORTHO05D007257 1.0e-12 78.2 229 29.3
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.0e-12 78.2 260 31.9
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 1.0e-12 78.2 284 31.7
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 1.0e-12 78.2 274 29.2
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 1.0e-12 78.2 263 30.0
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.8e-12 77.4 257 32.3
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 1.8e-12 77.4 257 31.9
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 3.0e-12 76.6 258 30.2
SalBow5G5634 Salvia bowleyana HOM05D007199 ORTHO05D007257 6.8e-12 75.5 249 33.7
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 1.2e-11 74.7 261 32.6
DCAR_002988 Daucus carota HOM05D007199 ORTHO05D007257 2.0e-11 73.9 230 31.3
AT2G46640 Arabidopsis thaliana HOM05D012720 ORTHO05D007257 2.6e-11 73.6 270 30.0
AL4G46070 Arabidopsis lyrata HOM05D012720 ORTHO05D007257 3.4e-11 73.2 261 29.1
CSS0044672 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 1.7e-10 70.9 253 36.0
arahy.Tifrunner.gnm1.ann1.GEK5Z0 Arachis hypogaea HOM05D007199 ORTHO05D007257 2.8e-10 70.1 242 31.8
A05p01150 Brassica napus HOM05D012720 ORTHO05D007257 3.7e-10 69.7 277 27.8
BolC4t21784H Brassica oleracea HOM05D012720 ORTHO05D007257 3.7e-10 69.7 277 29.6
Gohir.A12G114200 Gossypium hirsutum HOM05D007199 ORTHO05D007257 3.7e-10 69.7 253 30.8
arahy.Tifrunner.gnm1.ann1.WJU08E Arachis hypogaea HOM05D007199 ORTHO05D007257 4.9e-10 69.3 202 28.7
CsaV3_6G008960 Cucumis sativus L. HOM05D007199 ORTHO05D007257 4.9e-10 69.3 263 33.1
BcaB01g03200 Brassica carinata HOM05D012720 ORTHO05D007257 8.3e-10 68.6 266 27.8
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 8.3e-10 68.6 285 27.4
Aa31LG1G28040 Aethionema arabicum HOM05D007199 ORTHO05D007257 1.1e-09 68.2 268 29.5
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 1.8e-09 67.4 274 31.8
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 2.4e-09 67.0 240 34.6
CDE09G0027 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 4.1e-09 66.2 286 27.3
BraA05t19115Z Brassica rapa HOM05D012720 ORTHO05D007257 5.4e-09 65.9 276 26.8
CDE11G0583 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 5.4e-09 65.9 278 29.1
Sabra14G0075600 Salix brachista HOM05D007199 ORTHO05D007257 9.2e-09 65.1 82 46.3
Sp4g28690 Schrenkiella parvula HOM05D012720 ORTHO05D007257 1.6e-08 64.3 274 29.2
DCAR_006984 Daucus carota HOM05D007199 ORTHO05D007257 4.5e-08 62.8 227 29.5
PGSC0003DMG400000126 Solanum tuberosum HOM05D007199 ORTHO05D007257 4.5e-08 62.8 256 26.6
BcaC02g12658 Brassica carinata HOM05D012720 ORTHO05D007257 5.9e-08 62.4 271 28.8
arahy.Tifrunner.gnm1.ann1.P1IKWH Arachis hypogaea HOM05D007199 ORTHO05D007257 7.8e-08 62.0 73 43.8
Nitab4.5_0014168g0010 Nicotiana tabacum HOM05D007199 ORTHO05D007257 7.8e-08 62.0 243 29.2
Peaxi162Scf00087g00199 Petunia axillaris HOM05D007199 ORTHO05D007257 1.0e-07 61.6 261 27.2
C04p01310 Brassica napus HOM05D012720 ORTHO05D007257 2.3e-07 60.5 269 29.4
MBI12_g13712_MAGBIO Magnolia biondii HOM05D007199 ORTHO05D007257 2.9e-07 60.1 272 27.6
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 5.0e-07 59.3 251 28.7
Oeu022158.1 Olea europaea HOM05D007199 ORTHO05D007257 5.0e-07 59.3 229 35.4
Sopen01g040020 Solanum pennellii HOM05D007199 ORTHO05D007257 5.0e-07 59.3 256 27.0
BcaC02g07047 Brassica carinata HOM05D012720 ORTHO05D007257 6.6e-07 58.9 250 29.2
CDE02G0206 Ceratophyllum demersum HOM05D056078 ORTHO05D007257 5.6e-06 55.8 266 26.3
Aqoxy5G04262 Aquilegia oxysepala HOM05D007199 ORTHO05D007257 9.5e-06 55.1 263 30.4


User provided reference genes

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