Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0118971 Helianthus annuus HOM05D007721 ORTHO05D009811 4.4e-58 227.6 106 100.0
ECA236G4835 Erigeron canadensis HOM05D007721 ORTHO05D009811 9.5e-21 103.6 58 84.5
Lsat_1_v5_gn_8_56740 Lactuca sativa HOM05D007721 ORTHO05D009811 3.4e-18 95.1 58 75.9
ECA248G3328 Erigeron canadensis HOM05D000152 ORTHO05D001046 8.3e-17 90.5 54 77.8
GSVIVG01031536001 Vitis vinifera HOM05D007721 ORTHO05D009811 5.1e-14 81.3 57 64.9
Migut.D01985 Erythranthe guttata HOM05D007721 ORTHO05D009811 1.9e-13 79.3 61 57.4
vmacro04125 Vaccinium macrocarpon HOM05D007721 ORTHO05D009811 3.3e-13 78.6 61 55.7
Hma1.2p1_0055F.1_g031440 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 5.6e-13 77.8 61 57.4
CSS0018729 Camellia sinensis var. sinensis HOM05D007721 ORTHO05D009811 1.2e-12 76.6 61 55.7
Hma1.2p1_0591F.1_g185200 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 3.6e-12 75.1 61 55.7
SGA_v2.0_scaffold7G04151 Striga asiatica HOM05D000252 ORTHO05D000307 8.9e-11 70.5 52 61.5
TAR623G1786 Trochodendron aralioides HOM05D007721 ORTHO05D009811 1.2e-10 70.1 62 53.2
Actinidia06926 Actinidia chinensis HOM05D007721 ORTHO05D009811 1.5e-10 69.7 61 47.5
CiPaw.14G116700 Carya illinoinensis HOM05D007721 ORTHO05D009811 2.0e-10 69.3 59 52.5
Prupe.1G174200 Prunus persica HOM05D007721 ORTHO05D009811 3.4e-10 68.6 50 62.0
SalBow6G6016 Salvia bowleyana HOM05D007721 ORTHO05D009811 3.4e-10 68.6 61 52.5
Cc01_g05050 Coffea canephora HOM05D007721 ORTHO05D009811 4.4e-10 68.2 61 52.5
MD04G1023900 Malus domestica HOM05D007721 ORTHO05D009811 9.9e-10 67.0 50 62.0
RcHm_v2.0_Chr4g0411561 Rosa chinensis HOM05D007721 ORTHO05D009811 9.9e-10 67.0 47 66.0
SalBow6G6561 Salvia bowleyana HOM05D007721 ORTHO05D009811 2.2e-09 65.9 61 50.8
Ciclev10017339m.g Citrus clementina HOM05D007721 ORTHO05D009811 4.9e-09 64.7 57 50.9
Oeu013174.2 Olea europaea HOM05D007721 ORTHO05D009811 8.4e-09 63.9 61 57.4
Ah.06g193880 Amaranthus hybridus HOM05D007721 ORTHO05D009811 1.4e-08 63.2 53 54.7
QL01p004762 Quercus lobata HOM05D007721 ORTHO05D009811 1.9e-08 62.8 46 63.0
QL01p004062 Quercus lobata HOM05D007721 ORTHO05D009811 4.1e-08 61.6 46 60.9
FAN12G3598 Fragaria x ananassa HOM05D007721 ORTHO05D009811 5.4e-08 61.2 45 66.7
Lj3g0008015 Lotus japonicus HOM05D007721 ORTHO05D009811 7.1e-08 60.8 61 47.5
Manes.06G162100 Manihot esculenta HOM05D007721 ORTHO05D009811 9.2e-08 60.5 66 47.0
Eucgr.J00742 Eucalyptus grandis HOM05D007721 ORTHO05D009811 1.6e-07 59.7 49 55.1
Nn7g36378 Nelumbo nucifera HOM05D007721 ORTHO05D009811 1.6e-07 59.7 57 45.6
SGA_v2.0_scaffold114G31816 Striga asiatica HOM05D007721 ORTHO05D009811 1.6e-07 59.7 49 59.2
Carub.0006s1099 Capsella rubella HOM05D007721 ORTHO05D009811 2.1e-07 59.3 48 56.2
FAN17G1673 Fragaria x ananassa HOM05D007721 ORTHO05D009811 2.1e-07 59.3 38 71.1
FAN07G1724 Fragaria x ananassa HOM05D007721 ORTHO05D009811 2.7e-07 58.9 45 64.4
CARHR200650 Cardamine hirsuta HOM05D007721 ORTHO05D009811 3.5e-07 58.5 47 57.4
TWI34G0772 Tripterygium wilfordii HOM05D007721 ORTHO05D009811 3.5e-07 58.5 60 48.3
SEGI_33053 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 4.6e-07 58.2 60 45.0
Potri.009G050900 Populus trichocarpa HOM05D007721 ORTHO05D009811 6.0e-07 57.8 45 64.4
Nitab4.5_0000677g0250 Nicotiana tabacum HOM05D007721 ORTHO05D009811 1.3e-06 56.6 42 59.5
Phvul.010G051900 Phaseolus vulgaris HOM05D007721 ORTHO05D009811 1.3e-06 56.6 51 51.0
Solyc10g079920.2 Solanum lycopersicum HOM05D007721 ORTHO05D009811 1.3e-06 56.6 42 59.5
Sopen10g030540 Solanum pennellii HOM05D007721 ORTHO05D009811 1.3e-06 56.6 42 59.5
Thecc.09G239100 Theobroma cacao HOM05D007721 ORTHO05D009811 1.3e-06 56.6 47 55.3
Nitab4.5_0000562g0070 Nicotiana tabacum HOM05D007721 ORTHO05D009811 1.7e-06 56.2 42 59.5
Nitab4.5_0000937g0060 Nicotiana tabacum HOM05D007721 ORTHO05D009811 1.7e-06 56.2 45 55.6
unitig_746.g26884 Utricularia gibba HOM05D007721 ORTHO05D009811 1.7e-06 56.2 51 49.0
MELO3C014581.2 Cucumis melo HOM05D007721 ORTHO05D009811 2.3e-06 55.8 63 47.6
SEGI_08983 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 3.0e-06 55.5 47 53.2
arahy.Tifrunner.gnm1.ann1.MV9AMF Arachis hypogaea HOM05D007721 ORTHO05D009811 3.9e-06 55.1 51 45.1
arahy.Tifrunner.gnm1.ann1.S4R3T1 Arachis hypogaea HOM05D007721 ORTHO05D009811 3.9e-06 55.1 51 45.1
A10p25380 Brassica napus HOM05D007721 ORTHO05D009811 3.9e-06 55.1 47 55.3
Peaxi162Scf00069g00105 Petunia axillaris HOM05D007721 ORTHO05D009811 5.1e-06 54.7 42 59.5
FAN22G0179 Fragaria x ananassa HOM05D007721 ORTHO05D009811 6.6e-06 54.3 34 73.5
Lalb_Chr07g0195541 Lupinus albus HOM05D007721 ORTHO05D009811 8.6e-06 53.9 51 52.9
Sed0010702 Sechium edule HOM05D007721 ORTHO05D009811 8.6e-06 53.9 45 57.8


User provided reference genes

Program Settings